Non-homologous end-joining pathway associated with occurrence of myocardial infarction: gene set analysis of genome-wide association study data

<p>Purpose: DNA repair deficiencies have been postulated to play a role in the development and progression of cardiovascular disease (CVD). The hypothesis is that DNA damage accumulating with age may induce cell death, which promotes formation of unstable plaques. Defects in DNA repair mechanisms may therefore increase the risk of CVD events. We examined whether the joints effect of common genetic variants in 5 DNA repair pathways may influence the risk of CVD events.</p> <p>Methods: The PLINK set-based test was used to examine the association to myocardial infarction (MI) of the DNA repair pathway in GWAS data of 866 subjects of the GENetic DEterminants of Restenosis (GENDER) study and 5,244 subjects of the PROspective Study of Pravastatin in the Elderly at Risk (PROSPER) study. We included the main DNA repair pathways (base excision repair, nucleotide excision repair, mismatch repair, homologous recombination and non-homologous end-joining (NHEJ)) in the analysis.</p> <p>Results: The NHEJ pathway was associated with the occurrence of MI in both GENDER (P = 0.0083) and PROSPER (P = 0.014). This association was mainly driven by genetic variation in the MRE11A gene (PGENDER = 0.0001 and PPROSPER = 0.002). The homologous recombination pathway was associated with MI in GENDER only (P = 0.011), for the other pathways no associations were observed.</p> <p>Conclusion: This is the first study analyzing the joint effect of common genetic variation in DNA repair pathways and the risk of CVD events, demonstrating an association between the NHEJ pathway and MI in 2 different cohorts.</p&gt

Effect of a shelf-furnished screen on space utilisation and social behaviour of indoor group-housed cats (Felis silvestris catus)

The environment of the laboratory cat can be restrictive and may impact their welfare. Enrichment is often provided to alleviate welfare impacts but is seldom assessed or validated for efficacy. This study investigated the effect of novel room furniture (a screen) on the expression of agonistic and affiliative behaviours and space utilisation amongst colony-housed laboratory cats. Video footage of cats (N = 29) housed in social rooms (N = 4) was collected for 2 days before (baseline phase), 4 days during (test phase) and 2 days following (removal phase) introduction of the novel furniture. Space utilisation data were collected using scan sampling every 10 min and analysed using a generalised linear mixed effects model and Tukey’s HSD test. Behavioural data were collected using continuous sampling for 3 h a day in 6 × 30 min episodes and analysed using a Poisson generalised mixed effects model. Significantly more agonistic events occurred before the morning feed compared to after feeding within all phases (pre-feed mean = 0.227; post-feed mean = 0.026; P < 0.0001). However no significant differences were observed before the morning feed compared to after feeding between phases indicating that the screen had no effect on reducing pre-feed aggression at the morning feed. Agonistic behaviours occurred significantly less following the morning feed during the test phase when compared to the baseline phase (test post-feed mean = 0.011; baseline post-feed mean = 0.029; P = 0.0342). Significant differences were also observed on removal of the screen with agonistic behaviour increasing above baseline at the afternoon pre-feed time point, possibly indicative of aggression due to frustration or a rebound effect (removal pre-feed mean = 0.151; baseline pre-feed mean 0.048; P < 0.0001). Affiliative interactions between phases were not significantly affected by screen presence. Given the ratio of the screen to existing shelving (0.58:0.42) a statistical significant proportion of cats were found to be on the screen in the test phase of the study (P < 0.0001). This study suggests that exploiting the unused vertical space by the addition of stand-alone shelving should be considered a valuable resource for the cat by increasing useable space and reducing agonistic interactions

The biogeomorphological life cycle of poplars during the fluvial biogeomorphological succession: a special focus on Populus nigra L.

Riverine ecosystems are recurrently rejuvenated during destructive flood events and vegetation succession starts again. Poplars (i.e. species from Populus genera) respond to hydrogeomorphological constraints, but, in turn, also influence these processes. Thus, poplar development on bare mineral substrates is not exclusively a one-way vegetative process. Reciprocal interactions and adjustments between poplar species and sediment dynamics during their life cycle lead to the emergence of biogeomorphological entities within the fluvial corridor, such as vegetated islands, benches and floodplains. Based on a review of geomorphological, biological and ecological literature, we have identified and described the co-constructing processes between riparian poplars and their fluvial environment. We have explored the possibility that the modification of the hydrogeomorphological environment exerted, in particular, by the European black poplar (Populus nigra L.), increases its fitness and thus results in positive niche construction. We focus on the fundamental phases of dispersal, recruitment and establishment until sexual maturity of P. nigra by describing the hierarchy of interactions and the pattern of feedbacks between biotic and abiotic components. We explicitly relate the biological life cycle of P. nigra to the fluvial biogeomorphic succession model by referring to the ‘biogeomorphological life cycle’ of P. nigra. Finally, we propose new research perspectives based on this theoretical framework

Forward pi^0 Production and Associated Transverse Energy Flow in Deep-Inelastic Scattering at HERA

Deep-inelastic positron-proton interactions at low values of Bjorken-x down to x \approx 4.10^-5 which give rise to high transverse momentum pi^0 mesons are studied with the H1 experiment at HERA. The inclusive cross section for pi^0 mesons produced at small angles with respect to the proton remnant (the forward region) is presented as a function of the transverse momentum and energy of the pi^0 and of the four-momentum transfer Q^2 and Bjorken-x. Measurements are also presented of the transverse energy flow in events containing a forward pi^0 meson. Hadronic final state calculations based on QCD models implementing different parton evolution schemes are confronted with the data.Comment: 27 pages, 8 figures and 3 table