Pesticides and natural enemies (particularly ground beetles) of aphids on potato

The arthropod fauna of fields of ware potatoes in eastern Scotland was assessed to determine the species composition and relative abundance of the natural enemies of aphids on potato. Aphids and aphid-specific predators and parasitoids were surveyed by visual searches of foliage; epigeal arthropods were assessed by pitfall trapping.Aphid-specific natural enemies were generally uncommon but may have been underestimated. Approximately 11,000 animals were caught in pitfall traps and most were of the ground beetle genus Pterostichus (Coleoptera : Carabidae). Gut dissections showed that 14.4 and 30.5 per cent of Pterostichus melanarius and Pterostichus madidus respectively, contained aphid remnants. In the laboratory, demeton-S-methyl applied directly to these beetles had little apparent effect but 19.1 per cent died after consumption of treated aphids. Field experiments indicated that demeton-S-methyl influenced the trap catch of Pterostichus spp by altering their predatory activity. Caution should thus be exercised when interpreting such data.It is suggested that certain species of Carabidae may be important in the control of aphids on potato. Their potential is discussed and suggestions given for further research

Expanded encyclopaedias of DNA elements in the human and mouse genomes

All data are available on the ENCODE data portal: www.encodeproject. org. All code is available on GitHub from the links provided in the methods section. Code related to the Registry of cCREs can be found at https:// github.com/weng-lab/ENCODE-cCREs. Code related to SCREEN can be found at https://github.com/weng-lab/SCREEN.© The Author(s) 2020. The human and mouse genomes contain instructions that specify RNAs and proteins and govern the timing, magnitude, and cellular context of their production. To better delineate these elements, phase III of the Encyclopedia of DNA Elements (ENCODE) Project has expanded analysis of the cell and tissue repertoires of RNA transcription, chromatin structure and modification, DNA methylation, chromatin looping, and occupancy by transcription factors and RNA-binding proteins. Here we summarize these efforts, which have produced 5,992 new experimental datasets, including systematic determinations across mouse fetal development. All data are available through the ENCODE data portal (https://www.encodeproject.org), including phase II ENCODE1 and Roadmap Epigenomics2 data. We have developed a registry of 926,535 human and 339,815 mouse candidate cis-regulatory elements, covering 7.9 and 3.4% of their respective genomes, by integrating selected datatypes associated with gene regulation, and constructed a web-based server (SCREEN; http://screen.encodeproject.org) to provide flexible, user-defined access to this resource. Collectively, the ENCODE data and registry provide an expansive resource for the scientific community to build a better understanding of the organization and function of the human and mouse genomes.This work was supported by grants from the NIH under U01HG007019, U01HG007033, U01HG007036, U01HG007037, U41HG006992, U41HG006993, U41HG006994, U41HG006995, U41HG006996, U41HG006997, U41HG006998, U41HG006999, U41HG007000, U41HG007001, U41HG007002, U41HG007003, U54HG006991, U54HG006997, U54HG006998, U54HG007004, U54HG007005, U54HG007010 and UM1HG009442

Genome-wide identification and phenotypic characterization of seizure-associated copy number variations in 741,075 individuals

Copy number variants (CNV) are established risk factors for neurodevelopmental disorders with seizures or epilepsy. With the hypothesis that seizure disorders share genetic risk factors, we pooled CNV data from 10,590 individuals with seizure disorders, 16,109 individuals with clinically validated epilepsy, and 492,324 population controls and identified 25 genome-wide significant loci, 22 of which are novel for seizure disorders, such as deletions at 1p36.33, 1q44, 2p21-p16.3, 3q29, 8p23.3-p23.2, 9p24.3, 10q26.3, 15q11.2, 15q12-q13.1, 16p12.2, 17q21.31, duplications at 2q13, 9q34.3, 16p13.3, 17q12, 19p13.3, 20q13.33, and reciprocal CNVs at 16p11.2, and 22q11.21. Using genetic data from additional 248,751 individuals with 23 neuropsychiatric phenotypes, we explored the pleiotropy of these 25 loci. Finally, in a subset of individuals with epilepsy and detailed clinical data available, we performed phenome-wide association analyses between individual CNVs and clinical annotations categorized through the Human Phenotype Ontology (HPO). For six CNVs, we identified 19 significant associations with specific HPO terms and generated, for all CNVs, phenotype signatures across 17 clinical categories relevant for epileptologists. This is the most comprehensive investigation of CNVs in epilepsy and related seizure disorders, with potential implications for clinical practice

Memory Resilience to Alzheimer's Genetic Risk: Sex Effects in Predictor Profiles

Objectives: Apolipoprotein E (APOE) ɛ4 and Clusterin (CLU) C alleles are risk factors for Alzheimer’s disease (AD) and episodic memory (EM) decline. Memory resilience occurs when genetically at-risk adults perform at high and sustained levels. We investigated whether (a) memory resilience to AD genetic risk is predicted by biological and other risk markers and (b) the prediction profiles vary by sex and AD risk variant. Method: Using a longitudinal sample of nondemented adults (n = 642, aged 53–95) we focused on memory resilience (over 9 years) to 2 AD risk variants (APOE, CLU). Growth mixture models classified resilience. Random forest analysis, stratified by sex, tested the predictive importance of 22 nongenetic risk factors from 5 domains (n = 24–112). Results: For both sexes, younger age, higher education, stronger grip, and everyday novel cognitive activity predicted memory resilience. For women, 9 factors from functional, health, mobility, and lifestyle domains were also predictive. For men, only fewer depressive symptoms was an additional important predictor. The prediction profiles were similar for APOE and CLU. Discussion: Although several factors predicted resilience in both sexes, a greater number applied only to women. Sexspecific mechanisms and intervention targets are implied.This work was supported by the National Institutes of Health (National Institute on Aging; grant number R01 AG008235); the Canada Research Chairs program; and the Canadian Consortium on Neurodegeneration in Aging (with funding from Canadian Institutes of Health Research and partners, including SANOFI-ADVENTIS R&D) to Roger Dixon. The National Health and Medical Research Council (Research Fellowship #1102694 and Grant #1100579) supported Kaarin Anstey’s involvement

Inspiring Healthy Adolescent Choices: A Rationale for and Guide to Strength Promotion in Primary Care

The social, emotional, and biological health of adolescents requires their development as autonomous beings who make responsible decisions about their own health. Clinicians can assist in this development by adopting a strength-based approach to adolescent health care, which applies concepts from positive youth development to the medical office setting