The effect of porosity of dust particles on polarization and color with special reference to comets

[EN] Cosmic dust particles are mostly responsible for polarization of the light that we observe from astrophysical objects. They also lead to color-extinction, thermal re-emission and other scattering related phenomena. Micrometric dust particles are often made of smaller constituent (nanometric grains). They are characterized by their size (average radius), chemical composition and morphology (including porosity). In the present work, we address the question of the role of the dust particle porosity on light polarization and color, using Discrete Dipole Approximation (DDA) light scattering code. To this purpose, we develop an algorithm to generate dust particles of arbitrary values of porosity. In brief, starting from a compact spherical ensemble of dipoles,randomly the dipoles are removed one by one, such that the remaining dipoles remain connected within their neighbours. We stop the removal process when the desired porosity is obtained. Then we compute and study the optical properties of the porous dust particle. The main objective of this paper is to develop a tool to generate dust particles with an arbitrary value of porosity and to study the effect of porosity on their light scattering properties. As a possible application, we simulate cometary polarization and color values which grossly match with the observed ones for the comet 1P/Halley, leaving scope for future work.R.B. thanks the Assam University, Silchar, for hospitality in the framework of 'Global Initiative for Academic Network' (GIAN) programme from MHRD, April 2016. The authors AKS and RV thank Erasmus Mundus - NAMASTE programme for funds to do this collaborative work. Finally, we are thankful to anonymous referees of this paper, due to whose comments we believe the quality of paper has improved.Sen, AK.; Botet, R.; Vilaplana Cerda, RI.; Choudhury, NR.; Gupta, R. (2017). The effect of porosity of dust particles on polarization and color with special reference to comets. Journal of Quantitative Spectroscopy and Radiative Transfer. 198:164-178. doi:10.1016/j.jqsrt.2017.05.009S16417819

Loss of heterozygosity on chromosome 16p13.3 in hamartomas from tuberous sclerosis patients

Tuberous sclerosis (TSC) is an autosomal dominant condition with characteristic skin lesions, mental handicap, seizures and the development of hamartomas in the brain, heart, kidneys and other organs. Linkage studies have shown locus heterogeneity with a TSC gene mapped to chromosome 9q34 and a second, recently identified on 16p13.3. We have analysed DNA markers in eight hamartomas and one tumour from TSC patients and found allele loss on 16p13.3 in three angiomyolipomas, one cardiac rhabdomyoma, one cortical tuber and one giant cell astrocytoma. We suggest that the TSC gene on 16p13.3 functions like a tumour suppressor gene, in accordance with Knudsen's hypothesis

Development of synchronous VHL syndrome tumors reveals contingencies and constraints to tumor evolution

This is an Open Access article distributed under the terms of the Creative Commons Attribution License.-- et al.[Background]: Genomic analysis of multi-focal renal cell carcinomas from an individual with a germline VHL mutation offers a unique opportunity to study tumor evolution. [Results]: We perform whole exome sequencing on four clear cell renal cell carcinomas removed from both kidneys of a patient with a germline VHL mutation. We report that tumors arising in this context are clonally independent and harbour distinct secondary events exemplified by loss of chromosome 3p, despite an identical genetic background and tissue microenvironment. We propose that divergent mutational and copy number anomalies are contingent upon the nature of 3p loss of heterozygosity occurring early in tumorigenesis. However, despite distinct 3p events, genomic, proteomic and immunohistochemical analyses reveal evidence for convergence upon the PI3K-AKT-mTOR signaling pathway. Four germline tumors in this young patient, and in a second, older patient with VHL syndrome demonstrate minimal intra-tumor heterogeneity and mutational burden, and evaluable tumors appear to follow a linear evolutionary route, compared to tumors from patients with sporadic clear cell renal cell carcinoma. [Conclusions]: In tumors developing from a germline VHL mutation, the evolutionary principles of contingency and convergence in tumor development are complementary. In this small set of patients with early stage VHL-associated tumors, there is reduced mutation burden and limited evidence of intra-tumor heterogeneity.RF and JL received funding from EU FP7 (PREDICT project), EB is a Rosetrees Trust fellow, NM received funding from the Rosetrees Trust, MG is funded by the UK Medical Research Council, IV is funded by Spanish Ministerio de Economía y Competitividad subprograma Ramón y Cajal, and CS is a senior Cancer Research UK clinical research fellow and is funded by Cancer Research UK, the Rosetrees Trust, EU FP7 (projects PREDICT and RESPONSIFY, ID:259303), the Prostate Cancer Foundation, and the Breast Cancer Research Foundation. This study was supported by researchers at the National Institute for Health Research Biomedical Research Centres at University College London Hospitals and at the Royal Marsden Hospital.Peer Reviewe