pyWitness 1.0 : A python eyewitness identification analysis toolkit

Acknowledgements We are grateful to John T. Wixted for sharing his MATLAB code for the model fits presented in this paperPeer reviewedPublisher PD

PYG4OMETRY: a Python library for the creation of Monte Carlo radiation transport physical geometries

Creating and maintaining computer readable geometries for use in Monte Carlo Radiation Transport (MCRT) simulations is an error-prone and time-consuming task. Simulating a system often requires geometry from different sources and modelling environments, including a range of MCRT codes and computer-aided design (CAD) tools. PYG4OMETRY is a Python library that enables users to rapidly create, manipulate, display, read and write Geometry Description Markup Language (GDML)-based geometry used in simulations. PYG4OMETRY provides importation of CAD files to GDML tessellated solids, conversion of GDML geometry to FLUKA and conversely from FLUKA to GDML. The implementation of PYG4OMETRY is explained in detail along with small examples. The paper concludes with a complete example using most of the PYG4OMETRY features and a discussion of extensions and future work

SUB-MICROMETER RESOLUTION TRANSVERSE ELECTRON BEAM SIZE MEASUREMENT SYSTEM BASED ON OPTICAL TRANSITION RADIATION

Optical Transition Radiation (OTR) appears when a charged particle crosses a boundary between two media with different dielectric properties has widely been used as a tool for transverse profile measurements of charged particle beams in numerous facilities worldwide. The resolution of the conventional monitors is defined by the Point Spread Function (PSF) dimension - The source distribution generated by a single electron and projected by an optical system onto a screen. For small electron beam dimensions, the PSF form significantly depends on various parameters of the optical system like diffraction of the OTR tails, spherical and chromatic aberrations, etc. In our experiment we managed to create a system which can practically measure the PSF distribution and using a new self-calibration method we are able to calculate transverse electron beam size. Here we represent the development, data analysis and novel calibration technique of a sub-micrometer electron beam profile monitor based on the measurements of the PSF shape, which visibility is sensitive to sub-micrometer electron beam dimensions. Copyright © 2011 by IPAC'11/EPS-AG

BDSIM: An Accelerator Tracking Code with Particle-Matter Interactions

Beam Delivery Simulation (BDSIM) is a program that simulates the passage of particles in a particle accelerator. It uses a suite of standard high energy physics codes (Geant4, ROOT and CLHEP) to create a computational model of a particle accelerator that combines accurate accelerator tracking routines with all of the physics processes of particles in Geant4. This unique combination permits radiation and detector background simulations in accelerators where both accurate tracking of all particles is required over long range or over many revolutions of a circular machine, as well as interaction with the material of the accelerator.Comment: 20 pages, 17 figures. Accepted for publication 28th Jan 202

Measurements and simulations of wakefields at the Accelerator Test Facility 2

Wakefields are an important factor in accelerator design, and are a real concern when preserving the low beam emittance in modern machines. Charge dependent beam size growth has been observed at the Accelerator Test Facility (ATF2), a test accelerator for future linear collider beam delivery systems. Part of the explanation of this beam size growth is wakefields. In this paper we present numerical calculations of the wakefields produced by several types of geometrical discontinuities in the beam line as well as tracking simulations to estimate the induced effects. We also discuss precision beam kick measurements performed with the ATF2 cavity beam position monitor system for a test wakefield source in a movable section of the vacuum chamber. Using an improved model independent method we measured a wakefield kick for this movable section of about 0.49  V/pC/mm, which, compared to the calculated value from electromagnetic simulations of 0.41  V/pC/mm, is within the systematic error

Beam characterisation studies of the 62 MeV proton therapy beamline at the Clatterbridge Cancer Centre

The Clatterbridge Cancer Centre (CCC) in the United Kingdom is the world's first hospital proton beam therapy facility, providing treatment for ocular cancers since 1989. A 62 MeV beam of protons is produced by a Scanditronix cyclotron and transported through a passive delivery system. In addition to the long history of clinical use, the facility supports a wide programme of experimental work and as such, an accurate and reliable simulation model of the treatment beamline is highly valuable. However, as the facility has seen several changes to the accelerator and beamline over the years, a comprehensive study of the CCC beam dynamics is needed to firstly examine the beam optics. An extensive analysis was required to overcome facility related constraints to determine fundamental beamline parameters and define an optical lattice written with the Methodical Accelerator Design (MAD-X) and the particle tracking Beam Delivery Simulation (BDSIM) code. An optimised case is presented and simulated results of the optical functions, beam distribution, losses and the transverse rms beam sizes along the beamline are discussed. Corresponding optical and beam information was used in TOPAS to simulate transverse beam profiles and compared to EBT3 film measurements. We provide an overview of the magnetic components, beam transport, cyclotron, beam and treatment related parameters necessary for the development of a present day optical model of the facility. This work represents the first comprehensive study of the CCC facility to date, as a basis to determine input beam parameters to accurately simulate and completely characterise the beamline

Heavy Quarkonium Physics

This report is the result of the collaboration and research effort of the Quarkonium Working Group over the last three years. It provides a comprehensive overview of the state of the art in heavy-quarkonium theory and experiment, covering quarkonium spectroscopy, decay, and production, the determination of QCD parameters from quarkonium observables, quarkonia in media, and the effects on quarkonia of physics beyond the Standard Model. An introduction to common theoretical and experimental tools is included. Future opportunities for research in quarkonium physics are also discussed.Comment: xviii + 487 pages, 260 figures. The full text is also available at the Quarkonium Working Group web page: http://www.qwg.to.infn.i

Sub-lethal exposure to lead is associated with heightened aggression in an urban songbird

Many urban areas have elevated soil lead concentrations due to prior large-scale use of lead in products such as paint and automobile gasoline. This presents a potential problem for the growing numbers of wildlife living in urbanized areas as lead exposure is known to affect multiple physiological systems, including the nervous system, in vertebrate species. In humans and laboratory animals, low-level lead exposure is associated with neurological impairment, but less is known about how lead may affect the behavior of urban wildlife. We focused on the Northern Mockingbird Mimus polyglottos, a common, omnivorous North American songbird, to gain insights into how lead may affect the physiology and behavior of urban wildlife. We predicted that birds living in neighborhoods with high soil lead concentrations would (a) exhibit elevated lead concentrations in their blood and feathers, (b) exhibit lower body condition, (c) exhibit less diverse and consistent vocal repertoires, and (d) behave more aggressively during simulated conspecific territorial intrusions compared to birds living in neighborhoods with lower soil lead concentrations. Controlling for other habitat differences, we found that birds from areas of high soil lead had elevated lead concentrations in blood and feathers, but found no differences in body condition or vocal repertoires. However, birds from high lead areas responded more aggressively during simulated intrusions. These findings indicate that sub-lethal lead exposure may be common among wildlife living in urban areas, and that this exposure is associated with increased aggression. Better understanding of the extent of the relationship between lead exposure and aggression and the consequences this could have for survival and reproduction of wild animals are clear priorities for future work in this and other urban ecosystems

Micron-scale laser-wire scanner for the KEK Accelerator Test Facility extraction line

A laser-wire transverse electron beam size measurement system has been constructed and operated at the Accelerator Test Facility (ATF) extraction line at KEK. The construction of the system is described in detail along with the environment of the ATF related to the laser wire. A special set of electron beam optics was developed to generate an approximately 1 mu m vertical focus at the laser-wire location. The results of our operation at the ATF extraction line are presented, where a minimum rms electron beam size of 4: 8 +/- 0: 3 mu m was measured, and smaller electron beam sizes can be measured by developing the method further. The beam size at the laser-wire location was changed using quadrupoles and the resulting electron beam size measured, and vertical emittance extracted