The Parameterized Post-Friedmann Framework for Theories of Modified Gravity: Concepts, Formalism and Examples

A unified framework for theories of modified gravity will be an essential tool for interpreting the forthcoming deluge of cosmological data. We present such a formalism, the Parameterized Post-Friedmann framework (PPF), which parameterizes the cosmological perturbation theory of a wide variety of modified gravity models. PPF is able to handle spin-0 degrees of freedom from new scalar, vector and tensor fields, meaning that it is not restricted to simple models based solely on cosmological scalar fields. A direct correspondence is maintained between the parameterization and the underlying space of theories, which allows us to build up a `dictionary' of modified gravity theories and their PPF correspondences. In this paper we describe the construction of the parameterization and demonstrate its use through a number of worked examples relevant to the current literature. We indicate how the formalism will be implemented numerically, so that the dictionary of modified gravity can be pitted against forthcoming observations.Comment: 24 pages, updated to match version published in PRD. Discussion of section 4 extended. Suggestions for the busy reader are given at the end of section

Modified Gravity and Dark Energy models Beyond w(z)w(z)CDM Testable by LSST

One of the main science goals of the Large Synoptic Survey Telescope (LSST) is to uncover the nature of cosmic acceleration. In the base analysis, possible deviations from the Lambda-Cold-Dark-Matter ($\Lambda$CDM) background evolution will be probed by fitting a $w(z)$CDM model, which allows for a redshift-dependent dark energy equation of state with $w(z)$, within general relativity (GR). A rich array of other phenomena can arise due to deviations from the standard $\Lambda$CDM+GR model though, including modifications to the growth rate of structure and lensing, and novel screening effects on non-linear scales. Concrete physical models are needed to provide consistent predictions for these (potentially small) effects, to give us the best chance of detecting them and separating them from astrophysical systematics. A complex plethora of possible models has been constructed over the past few decades, with none emerging as a particular favorite. This document prioritizes a subset of these models along with rationales for further study and inclusion into the LSST Dark Energy Science Collaboration (DESC) data analysis pipelines, based on their observational viability, theoretical plausibility, and level of theoretical development. We provide references and theoretical expressions to aid the integration of these models into DESC software and simulations, and give justifications for why other models were not prioritized. While DESC efforts are free to pursue other models, we provide here guidelines on which theories appear to have higher priority for collaboration efforts due to their perceived promise and greater instructional value.Comment: 61 pages. Some acknowledgments and references added. This is version-1.1 of an internal collaboration document of LSST-DESC that is being made public and is not planned for submission to a journa

Identification of upper thermal thresholds during development in the endangered Nechako white sturgeon with management implications for a regulated river

Climate change-induced warming effects are already evident in river ecosystems, and projected increases in temperature will continue to amplify stress on fish communities. In addition, many rivers globally are impacted by dams, which have many negative effects on fishes by altering flow, blocking fish passage, and changing sediment composition. However, in some systems, dams present an opportunity to manage river temperature through regulated releases of cooler water. For example, there is a government mandate for Kenney dam operators in the Nechako river, British Columbia, Canada, to maintain river temperature <20°C in July and August to protect migrating sockeye salmon (Oncorhynchus nerka). However, there is another endangered fish species inhabiting the same river, Nechako white sturgeon (Acipenser transmontanus), and it is unclear if these current temperature regulations, or timing of the regulations, are suitable for spawning and developing sturgeon. In this study, we aimed to identify upper thermal thresholds in white sturgeon embryos and larvae to investigate if exposure to current river temperatures are playing a role in recruitment failure. We incubated embryos and yolk-sac larvae in three environmentally relevant temperatures (14, 18 and 21°C) throughout development to identify thermal thresholds across different levels of biological organization. Our results demonstrate upper thermal thresholds at 21°C across physiological measurements in embryo and yolk-sac larvae white sturgeon. Before hatch, both embryo survival and metabolic rate were reduced at 21°C. After hatch, sublethal consequences continued at 21°C because larval sturgeon had decreased thermal plasticity and a dampened transcriptional response during development. In recent years, the Nechako river has reached 21°C by the end of June, and at this temperature, a decrease in sturgeon performance is evident in most of the traits measured. As such, the thermal thresholds identified here suggest current temperature regulations may not be suitable for developing white sturgeon and future recruitment

Constitutive, but Not Challenge-Induced, Interleukin-10 Production Is Robust in Acute Pre-Pubescent Protein and Energy Deficits: New Support for the Tolerance Hypothesis of Malnutrition-Associated Immune Depression Based on Cytokine Production in vivo

The tolerance model of acute (i.e., wasting) pre-pubescent protein and energy deficits proposes that the immune depression characteristic of these pathologies reflects an intact anti-inflammatory form of immune competence that reduces the risk of autoimmune reactions to catabolically released self antigens. A cornerstone of this proposition is the finding that constitutive (first-tier) interleukin(IL)-10 production is sustained even into the advanced stages of acute malnutrition. The IL-10 response to inflammatory challenge constitutes a second tier of anti-inflammatory regulation and was the focus of this investigation. Weanling mice consumed a complete diet ad libitum, a low-protein diet ad libitum (mimicking incipient kwashiorkor), or the complete diet in restricted daily quantities (mimicking marasmus), and their second-tier IL-10 production was determined both in vitro and in vivo using lipopolysaccharide (LPS) and anti-CD3 as stimulants of innate and adaptive defences, respectively. Both early (3 days) and advanced (14 days) stages of wasting pathology were examined and three main outcomes emerged. First, classic in vitro systems are unreliable for discerning cytokine production in vivo. Secondly, in diverse forms of acute malnutrition declining challenge-induced IL-10 production may provide an early sign that anti-inflammatory control over immune competence is failing. Thirdly, and most fundamentally, the investigation provides new support for the tolerance model of malnutrition-associated inflammatory immune depression

The missing link in gravitational-wave astronomy: A summary of discoveries waiting in the decihertz range

Since 2015 the gravitational-wave observations of LIGO and Virgo have transformed our understanding of compact-object binaries. In the years to come, ground-based gravitational-wave observatories such as LIGO, Virgo, and their successors will increase in sensitivity, discovering thousands of stellar-mass binaries. In the 2030s, the space-based LISA will provide gravitational-wave observations of massive black holes binaries. Between the ∼10–103 Hz band of ground-based observatories and the ∼10−4–10− 1 Hz band of LISA lies the uncharted decihertz gravitational-wave band. We propose a Decihertz Observatory to study this frequency range, and to complement observations made by other detectors. Decihertz observatories are well suited to observation of intermediate-mass (∼102–104M⊙) black holes; they will be able to detect stellar-mass binaries days to years before they merge, providing early warning of nearby binary neutron star mergers and measurements of the eccentricity of binary black holes, and they will enable new tests of general relativity and the Standard Model of particle physics. Here we summarise how a Decihertz Observatory could provide unique insights into how black holes form and evolve across cosmic time, improve prospects for both multimessenger astronomy and multiband gravitational-wave astronomy, and enable new probes of gravity, particle physics and cosmology.publishedVersio

Cosmic voids::a novel probe to shed light on our Universe

Cosmic voids, the less dense patches of the Universe, are promising laboratories to extract cosmological information. Thanks to their unique low density character, voids are extremely sensitive to diffuse components such as neutrinos and dark energy, and represent ideal environments to study modifications of gravity, where the effects of such modifications are expected to be more prominent. Robust void-related observables, including for example redshift-space distortions (RSD) and weak lensing around voids, are a promising way to chase and test new physics. Cosmological analysis of the large-scale structure of the Universe predominantly relies on the high density regions. Current and upcoming surveys are designed to optimize the extraction of cosmological information from these zones, but leave voids under-exploited. A dense, large area spectroscopic survey with imaging capabilities is ideal to exploit the power of voids fully. Besides helping illuminate the nature of dark energy, modified gravity, and neutrinos, this survey will give access to a detailed map of under-dense regions, providing an unprecedented opportunity to observe and study a so far under-explored galaxy population

Genetic and environmental influences on human height from infancy through adulthood at different levels of parental education

Genetic factors explain a major proportion of human height variation, but differences in mean stature have also been found between socio-economic categories suggesting a possible effect of environment. By utilizing a classical twin design which allows decomposing the variation of height into genetic and environmental components, we tested the hypothesis that environmental variation in height is greater in offspring of lower educated parents. Twin data from 29 cohorts including 65,978 complete twin pairs with information on height at ages 1 to 69 years and on parental education were pooled allowing the analyses at different ages and in three geographic-cultural regions (Europe, North America and Australia, and East Asia). Parental education mostly showed a positive association with offspring height, with significant associations in mid-childhood and from adolescence onwards. In variance decomposition modeling, the genetic and environmental variance components of height did not show a consistent relation to parental education. A random-effects meta-regression analysis of the aggregate-level data showed a trend towards greater shared environmental variation of height in low parental education families. In conclusion, in our very large dataset from twin cohorts around the globe, these results provide only weak evidence for the study hypothesis.Peer reviewe

Parental Education and Genetics of BMI from Infancy to Old Age : A Pooled Analysis of 29 Twin Cohorts

Objective The objective of this study was to analyze how parental education modifies the genetic and environmental variances of BMI from infancy to old age in three geographic-cultural regions. Methods A pooled sample of 29 cohorts including 143,499 twin individuals with information on parental education and BMI from age 1 to 79 years (299,201 BMI measures) was analyzed by genetic twin modeling. Results Until 4 years of age, parental education was not consistently associated with BMI. Thereafter, higher parental education level was associated with lower BMI in males and females. Total and additive genetic variances of BMI were smaller in the offspring of highly educated parents than in those whose parents had low education levels. Especially in North American and Australian children, environmental factors shared by co-twins also contributed to the higher BMI variation in the low education level category. In Europe and East Asia, the associations of parental education with mean BMI and BMI variance were weaker than in North America and Australia. Conclusions Lower parental education level is associated with higher mean BMI and larger genetic variance of BMI after early childhood, especially in the obesogenic macro-environment. The interplay among genetic predisposition, childhood social environment, and macro-social context is important for socioeconomic differences in BMI.Peer reviewe

A framework for human microbiome research

A variety of microbial communities and their genes (the microbiome) exist throughout the human body, with fundamental roles in human health and disease. The National Institutes of Health (NIH)-funded Human Microbiome Project Consortium has established a population-scale framework to develop metagenomic protocols, resulting in a broad range of quality-controlled resources and data including standardized methods for creating, processing and interpreting distinct types of high-throughput metagenomic data available to the scientific community. Here we present resources from a population of 242 healthy adults sampled at 15 or 18 body sites up to three times, which have generated 5,177 microbial taxonomic profiles from 16S ribosomal RNA genes and over 3.5 terabases of metagenomic sequence so far. In parallel, approximately 800 reference strains isolated from the human body have been sequenced. Collectively, these data represent the largest resource describing the abundance and variety of the human microbiome, while providing a framework for current and future studies