The emergence of equatorial deep jets in an idealised primitive equation model: an interpretation in terms of basin modes

Ocean circulation models do not generally exhibit equatorial deep jets (EDJs), even though EDJs are a recognised feature of the observed ocean circulation along the equator and they are thought to be important for tracer transport along the equator and even equatorial climate. EDJs are nevertheless found in nonlinear primitive equation models with idealised box geometry. Here we analyse several such model runs. We note that the variability of the zonal velocity in the model is dominated by the gravest linear equatorial basin mode for a wide range of baroclinic vertical normal modes and that the EDJs in the model are dominated by energy contained in vertical modes between 10 and 20. The emergence of the EDJs is shown to involve the linear superposition of several such neighbouring basin modes. Furthermore, the phase of these basin modes is set at the start of the model run and, in the case of the reference experiment, the same basin modes can be found in a companion experiment in which the amplitude of the forcing has been reduced by a factor of 1000. We also argue that following the spin-up, energy must be transferred between different vertical modes. This is because the model simulations are dominated by downward phase propagation following the spin-up whereas our reconstructions imply episodes of upward and downward propagation. The transfer of energy between the vertical modes is associated with a decadal modulation of the EDJs

Short-term variability in euphotic zone biogeochemistry and primary productivity at Station ALOHA : a case study of summer 2012

Author Posting. © American Geophysical Union, 2015. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Global Biogeochemical Cycles 29 (2015): 1145–1164, doi:10.1002/2015GB005141.Time-series observations are critical to understand the structure, function, and dynamics of marine ecosystems. The Hawaii Ocean Time-series program has maintained near-monthly sampling at Station ALOHA (22°45′N, 158°00′W) in the oligotrophic North Pacific Subtropical Gyre (NPSG) since 1988 and has identified ecosystem variability over seasonal to interannual timescales. To further extend the temporal resolution of these near-monthly time-series observations, an extensive field campaign was conducted during July–September 2012 at Station ALOHA with near-daily sampling of upper water-column biogeochemistry, phytoplankton abundance, and activity. The resulting data set provided biogeochemical measurements at high temporal resolution and documents two important events at Station ALOHA: (1) a prolonged period of low productivity when net community production in the mixed layer shifted to a net heterotrophic state and (2) detection of a distinct sea-surface salinity minimum feature which was prominent in the upper water column (0–50 m) for a period of approximately 30 days. The shipboard observations during July–September 2012 were supplemented with in situ measurements provided by Seagliders, profiling floats, and remote satellite observations that together revealed the extent of the low productivity and the sea-surface salinity minimum feature in the NPSG.NOAA Climate Observation Division; National Science Foundation (NSF) Center for Microbial Oceanography: Research and Education (C-MORE) Grant Numbers: EF0424599, OCE-1153656, OCE-1260164; Gordon and Betty Moore Foundation Marine Microbiology Investigator2016-02-1

Short-term variability in euphotic zone biogeochemistry and primary productivity at Station ALOHA: A case study of summer 2012

Time-series observations are critical to understand the structure, function, and dynamics of marine ecosystems. The Hawaii Ocean Time-series program has maintained near-monthly sampling at Station ALOHA (22°45′N, 158°00′W) in the oligotrophic North Pacific Subtropical Gyre (NPSG) since 1988 and has identified ecosystem variability over seasonal to interannual timescales. To further extend the temporal resolution of these near-monthly time-series observations, an extensive field campaign was conducted during July–September 2012 at Station ALOHA with near-daily sampling of upper water-column biogeochemistry, phytoplankton abundance, and activity. The resulting data set provided biogeochemical measurements at high temporal resolution and documents two important events at Station ALOHA: (1) a prolonged period of low productivity when net community production in the mixed layer shifted to a net heterotrophic state and (2) detection of a distinct sea-surface salinity minimum feature which was prominent in the upper water column (0–50 m) for a period of approximately 30 days. The shipboard observations during July–September 2012 were supplemented with in situ measurements provided by Seagliders, profiling floats, and remote satellite observations that together revealed the extent of the low productivity and the sea-surface salinity minimum feature in the NPSG.This is the publisher’s final pdf. The article is copyrighted by American Geophysical Union and published by John Wiley & Sons, Inc. It can be found at: http://agupubs.onlinelibrary.wiley.com/agu/journal/10.1002/%28ISSN%291944-9224

Wave-induced deep equatorial ocean circulation

Thesis (Ph.D.)--University of Hawaii at Manoa, 2008.For weak Yanai wave amplitude, currents resembling the TEJs are obtained, but only within the beam. They are the mean Eulerian flow, which cancels the Stokes drift of the Yanai waves, yielding a zero-mean Lagrangian flow: the water parcels conserve their potential vorticity (PV) and are stationary over a wave cycle. With stronger amplitude, the Yanai waves become unstable, and lose their energy to small vertical scales where it is dissipated. The resulting vertical decay of the Yanai waves provides a source of PV, allowing water parcels to move meridionally within the beam. This process results in TEJs with a mean Lagrangian zonal flow extending to the west of the beam.In the Pacific and Atlantic oceans, a complex equatorial current structure is found below the thermocline. The currents are zonal with typical speeds from 5 to 20 cm s-1 and extend as deep as 2500 m. The structure can be divided into two overlapping parts: the Tall Equatorial Jets (TEJs), with large vertical scale and alternating with latitude, and the Equatorial Deep Jets (EDJs), centered on the equator and alternating in the vertical with a wavelength of several hundred meters.In the present study, using idealized numerical simulations and analytical solutions, we demonstrate that the TEJs could result from a rectification of a beam of monthly-periodic Yanai waves that is generated in the eastern part of the basin by instabilities of the swift equatorial surface currents.This circulation poses a computational and a theoretical challenge. First, state-of-the-art high-resolution regional models and Ocean General Circulation Models (OGCMs) typically produce a rather weak, inaccurate and incomplete picture of the circulation. Second, the most promising existing theory, based on the rectification of intraseasonal Yanai waves, cannot account for the basin-wide presence of the TEJs.Includes bibliographical references (leaves 148-157).Also available by subscription via World Wide Web158 leaves, bound 29 c

Juranek LaurieCEOASShortTermVariability.pdf

Time-series observations are critical to understand the structure, function, and dynamics of marine ecosystems. The Hawaii Ocean Time-series program has maintained near-monthly sampling at Station ALOHA (22°45′N, 158°00′W) in the oligotrophic North Pacific Subtropical Gyre (NPSG) since 1988 and has identified ecosystem variability over seasonal to interannual timescales. To further extend the temporal resolution of these near-monthly time-series observations, an extensive field campaign was conducted during July–September 2012 at Station ALOHA with near-daily sampling of upper water-column biogeochemistry, phytoplankton abundance, and activity. The resulting data set provided biogeochemical measurements at high temporal resolution and documents two important events at Station ALOHA: (1) a prolonged period of low productivity when net community production in the mixed layer shifted to a net heterotrophic state and (2) detection of a distinct sea-surface salinity minimum feature which was prominent in the upper water column (0–50 m) for a period of approximately 30 days. The shipboard observations during July–September 2012 were supplemented with in situ measurements provided by Seagliders, profiling floats, and remote satellite observations that together revealed the extent of the low productivity and the sea-surface salinity minimum feature in the NPSG

Juranek LaurieCEOASShortTermVariabilitySupplement.pdf

Time-series observations are critical to understand the structure, function, and dynamics of marine ecosystems. The Hawaii Ocean Time-series program has maintained near-monthly sampling at Station ALOHA (22°45′N, 158°00′W) in the oligotrophic North Pacific Subtropical Gyre (NPSG) since 1988 and has identified ecosystem variability over seasonal to interannual timescales. To further extend the temporal resolution of these near-monthly time-series observations, an extensive field campaign was conducted during July–September 2012 at Station ALOHA with near-daily sampling of upper water-column biogeochemistry, phytoplankton abundance, and activity. The resulting data set provided biogeochemical measurements at high temporal resolution and documents two important events at Station ALOHA: (1) a prolonged period of low productivity when net community production in the mixed layer shifted to a net heterotrophic state and (2) detection of a distinct sea-surface salinity minimum feature which was prominent in the upper water column (0–50 m) for a period of approximately 30 days. The shipboard observations during July–September 2012 were supplemented with in situ measurements provided by Seagliders, profiling floats, and remote satellite observations that together revealed the extent of the low productivity and the sea-surface salinity minimum feature in the NPSG

Short‐term variability in euphotic zone biogeochemistry and primary productivity at Station ALOHA: A case study of summer 2012

Author Posting. © American Geophysical Union, 2015. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Global Biogeochemical Cycles 29 (2015): 1145–1164, doi:10.1002/2015GB005141.Time-series observations are critical to understand the structure, function, and dynamics of marine ecosystems. The Hawaii Ocean Time-series program has maintained near-monthly sampling at Station ALOHA (22°45′N, 158°00′W) in the oligotrophic North Pacific Subtropical Gyre (NPSG) since 1988 and has identified ecosystem variability over seasonal to interannual timescales. To further extend the temporal resolution of these near-monthly time-series observations, an extensive field campaign was conducted during July–September 2012 at Station ALOHA with near-daily sampling of upper water-column biogeochemistry, phytoplankton abundance, and activity. The resulting data set provided biogeochemical measurements at high temporal resolution and documents two important events at Station ALOHA: (1) a prolonged period of low productivity when net community production in the mixed layer shifted to a net heterotrophic state and (2) detection of a distinct sea-surface salinity minimum feature which was prominent in the upper water column (0–50 m) for a period of approximately 30 days. The shipboard observations during July–September 2012 were supplemented with in situ measurements provided by Seagliders, profiling floats, and remote satellite observations that together revealed the extent of the low productivity and the sea-surface salinity minimum feature in the NPSG.NOAA Climate Observation Division; National Science Foundation (NSF) Center for Microbial Oceanography: Research and Education (C-MORE) Grant Numbers: EF0424599, OCE-1153656, OCE-1260164; Gordon and Betty Moore Foundation Marine Microbiology Investigator2016-02-1