515 research outputs found
Covariant equations for the three-body bound state
The covariant spectator (or Gross) equations for the bound state of three
identical spin 1/2 particles, in which two of the three interacting particles
are always on shell, are developed and reduced to a form suitable for numerical
solution. The equations are first written in operator form and compared to the
Bethe-Salpeter equation, then expanded into plane wave momentum states, and
finally expanded into partial waves using the three-body helicity formalism
first introduced by Wick. In order to solve the equations, the two-body
scattering amplitudes must be boosted from the overall three-body rest frame to
their individual two-body rest frames, and all effects which arise from these
boosts, including the Wigner rotations and rho-spin decomposition of the
off-shell particle, are treated exactly. In their final form, the equations
reduce to a coupled set of Faddeev-like double integral equations with
additional channels arising from the negative rho-spin states of the off-shell
particle.Comment: 57 pages, RevTeX, 6 figures, uses epsf.st
Spacings of Quarkonium Levels with the Same Principal Quantum Number
The spacings between bound-state levels of the Schr\"odinger equation with
the same principal quantum number but orbital angular momenta
differing by unity are found to be nearly equal for a wide range of power
potentials , with . Semiclassical approximations are in accord with this behavior. The
result is applied to estimates of masses for quarkonium levels which have not
yet been observed, including the 2P states and the 1D
states.Comment: 20 pages, latex, 3 uuencoded figures submitted separately (process
using psfig.sty
Preferential, enhanced breast cancer cell migration on biomimetic electrospun nanofiber ‘cell highways’
BACKGROUND: Aggressive metastatic breast cancer cells seemingly evade surgical resection and current therapies, leading to colonization in distant organs and tissues and poor patient prognosis. Therefore, high-throughput in vitro tools allowing rapid, accurate, and novel anti-metastatic drug screening are grossly overdue. Conversely, aligned nanofiber constitutes a prominent component of the late-stage breast tumor margin extracellular matrix. This parallel suggests that the use of a synthetic ECM in the form of a nanoscale model could provide a convenient means of testing the migration potentials of cancer cells to achieve a long-term goal of providing clinicians an in vitro platform technology to test the efficacy of novel experimental anti-metastatic compounds. METHODS: Electrospinning produces highly aligned, cell-adhesive nanofiber matrices by applying a strong electric field to a polymer-containing solution. The resulting fibrous microstructure and morphology closely resembles in vivo tumor microenvironments suggesting their use in analysis of migratory potentials of metastatic cancer cells. Additionally, a novel interface with a gel-based delivery system creates CXCL12 chemotactic gradients to enhance CXCR4-expressing cell migration. RESULTS: Cellular dispersions of MCF-10A normal mammary epithelial cells or human breast cancer cells (MCF-7 and MDA-MB-231) seeded on randomly-oriented nanofiber exhibited no significant differences in total or net distance traveled as a result of the underlying topography. Cells traveled ~2-5 fold greater distances on aligned fiber. Highly-sensitive MDA-MB-231 cells displayed an 82% increase in net distance traversed in the presence of a CXCL12 gradient. In contrast, MCF-7 cells exhibited only 31% increase and MCF-10A cells showed no statistical difference versus control or vehicle conditions. MCF-10A cells displayed little sensitivity to CXCL12 gradients, while MCF-7 cells displayed early sensitivity when CXCL12 concentrations were higher. MDA-MB-231 cells displayed low relative expression levels of CXCR4, but high sensitivity resulting in 55-fold increase at late time points due to CXCL12 gradient dissipation. CONCLUSIONS: This model could create clinical impact as an in vitro diagnostic tool for rapid assessment of tumor needle biopsies to confirm metastatic tumors, their invasiveness, and allow high-throughput drug screening providing rapid development of personalized therapies. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/1471-2407-14-825) contains supplementary material, which is available to authorized users
Relativistic Corrections to the Triton Binding Energy
The influence of relativity on the triton binding energy is investigated. The
relativistic three-dimensional version of the Bethe-Salpeter equation proposed
by Blankenbecler and Sugar (BbS) is used. Relativistic (non-separable)
one-boson-exchange potentials (constructed in the BbS framework) are employed
for the two-nucleon interaction. In a 34-channel Faddeev calculation, it is
found that relativistic effects increase the triton binding energy by about 0.2
MeV. Including charge-dependence (besides relativity), the final triton binding
energy predictions are 8.33 and 8.16 MeV for the Bonn A and B potential,
respectively.Comment: 25 pages of text (latex), 1 figure (not included, available upon
request
What is the structure of the Roper resonance?
We investigate the structure of the nucleon resonance N^*(1440) (Roper)
within a coupled-channel meson exchange model for pion-nucleon scattering. The
coupling to pipiN states is realized effectively by the coupling to the sigmaN,
piDelta and rhoN channels. The interaction within and between these channels is
derived from an effective Lagrangian based on a chirally symmetric Lagrangian,
which is supplemented by well known terms for the coupling of the Delta isobar,
the omega meson and the 'sigma', which is the name given here to the strong
correlation of two pions in the scalar-isoscalar channel. In this model the
Roper resonance can be described by meson-baryon dynamics alone; no genuine
N^*(1440) (3 quark) resonance is needed in order to fit piN phase shifts and
inelasticities.Comment: 55 pages, 14 figure
Measurement of the production of a W boson in association with a charm quark in pp collisions at √s = 7 TeV with the ATLAS detector
The production of a W boson in association with a single charm quark is studied using 4.6 fb−1 of pp collision data at s√ = 7 TeV collected with the ATLAS detector at the Large Hadron Collider. In events in which a W boson decays to an electron or muon, the charm quark is tagged either by its semileptonic decay to a muon or by the presence of a charmed meson. The integrated and differential cross sections as a function of the pseudorapidity of the lepton from the W-boson decay are measured. Results are compared to the predictions of next-to-leading-order QCD calculations obtained from various parton distribution function parameterisations. The ratio of the strange-to-down sea-quark distributions is determined to be 0.96+0.26−0.30 at Q 2 = 1.9 GeV2, which supports the hypothesis of an SU(3)-symmetric composition of the light-quark sea. Additionally, the cross-section ratio σ(W + +c¯¯)/σ(W − + c) is compared to the predictions obtained using parton distribution function parameterisations with different assumptions about the s−s¯¯¯ quark asymmetry
Seismogenic faults, landslides, and associated tsunamis off southern Italy - Cruise No. M86/2, December 27, 2011 - January 17, 2012, Cartagena (Spain) - Brindisi (Italy)
Summary
The continental margins of southern Italy are located along converging plate boundaries, which
are affected by intense seismicity and volcanic activity. Most of the coastal areas experienced
severe earthquakes, landslides, and tsunamis in historical and/or modern times. The most
prominent example is the Messina earthquake of Dec. 28, 1908 (Ms=7.3; 80,000 casualties),
which was characterized by the worst tsunami Italy experienced in the historical time (~2000
casualties). It is, however, still unclear, whether this tsunami was triggered by a sudden vertical
movement along a major fault during the earthquake or as a result of a giant marine slide
initiated by the earthquake. The recurrence rates of major landslides and therefore the risk
associated with landslides is also unknown. Based on detailed bathymetric data sets collected by
Italian colleagues in the frame of the MaGIC Project (Marine Geohazards along the Italian
Coast), we collected seismic data (2D and 3D) and gravity cores in three working areas (The
Messina Straits, off Eastern Sicily, the Gioia Basin). A dense grid of new 2D-seismic data in the
Messina Straits will allow to map fault patterns in great detail. One interesting outcome in this
context is the identification of a set of normal faults striking in an EW-direction, which is almost
perpendicular to the previously postulated faults. This EW-striking faults seem to be active. The
area off eastern Sicily is characterized by numerous landslides and a complex deformation
pattern. A 3D-seismic data set has been collected during the cruise using the so called P-cable in
order to investigate these deformation patterns in detail. The new data will be the basis for a risk
assessment in the working areas
Genomic, Pathway Network, and Immunologic Features Distinguishing Squamous Carcinomas
This integrated, multiplatform PanCancer Atlas study co-mapped and identified distinguishing
molecular features of squamous cell carcinomas (SCCs) from five sites associated with smokin
Pan-Cancer Analysis of lncRNA Regulation Supports Their Targeting of Cancer Genes in Each Tumor Context
Long noncoding RNAs (lncRNAs) are commonly dys-regulated in tumors, but only a handful are known toplay pathophysiological roles in cancer. We inferredlncRNAs that dysregulate cancer pathways, onco-genes, and tumor suppressors (cancer genes) bymodeling their effects on the activity of transcriptionfactors, RNA-binding proteins, and microRNAs in5,185 TCGA tumors and 1,019 ENCODE assays.Our predictions included hundreds of candidateonco- and tumor-suppressor lncRNAs (cancerlncRNAs) whose somatic alterations account for thedysregulation of dozens of cancer genes and path-ways in each of 14 tumor contexts. To demonstrateproof of concept, we showed that perturbations tar-geting OIP5-AS1 (an inferred tumor suppressor) andTUG1 and WT1-AS (inferred onco-lncRNAs) dysre-gulated cancer genes and altered proliferation ofbreast and gynecologic cancer cells. Our analysis in-dicates that, although most lncRNAs are dysregu-lated in a tumor-specific manner, some, includingOIP5-AS1, TUG1, NEAT1, MEG3, and TSIX, synergis-tically dysregulate cancer pathways in multiple tumorcontexts
Spatial Organization and Molecular Correlation of Tumor-Infiltrating Lymphocytes Using Deep Learning on Pathology Images
Beyond sample curation and basic pathologic characterization, the digitized H&E-stained images
of TCGA samples remain underutilized. To highlight this resource, we present mappings of tumorinfiltrating lymphocytes (TILs) based on H&E images from 13 TCGA tumor types. These TIL
maps are derived through computational staining using a convolutional neural network trained to
classify patches of images. Affinity propagation revealed local spatial structure in TIL patterns and
correlation with overall survival. TIL map structural patterns were grouped using standard
histopathological parameters. These patterns are enriched in particular T cell subpopulations
derived from molecular measures. TIL densities and spatial structure were differentially enriched
among tumor types, immune subtypes, and tumor molecular subtypes, implying that spatial
infiltrate state could reflect particular tumor cell aberration states. Obtaining spatial lymphocytic
patterns linked to the rich genomic characterization of TCGA samples demonstrates one use for
the TCGA image archives with insights into the tumor-immune microenvironment
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