Representativeness of meridional hydrographic sections in the western South Atlantic

Many studies of the oceanic circulation are based on data collected during quasi-synoptic hydrographic surveys. After spatial averaging, to filter out the effects of mesoscale variability, it is often explicitly or implicitly assumed that the synoptic hydrographic gradients are representative of a quasi-steady mean state. Climatological tracer fields and float data at the depth of the North Atlantic Deep Water in the western South Atlantic (Brazil Basin) support the notion of a quasi-steady mean circulation characterized by alternating bands of primarily zonal flow with meridional scales of several hundreds of km. Visually, the mean circulation appears to dominate three samples of the large-scale meridional-density-gradient field taken between 1983 and 1994. A quantitative comparison reveals, however, that the baroclinic temporal variability of the zonal velocities is of the same magnitude as the mean and is associated with similar spatial scales. The synoptic geostrophic flow field is, therefore, only marginally representative of the mean state. Thus, the data do not support one of the central assumptions of reference-velocity methods, such as linear box-inverse models and the β-spiral, because baroclinic temporal variability renders the equation systems underlying these methods inconsistent. A modal decomposition of the temporally varying baroclinic zonal velocity field in the Brazil Basin indicates that the first two dynamical modes dominate, accounting for ≈90% of the rms velocities. The residual flow field that remains after removing the first two baroclinic modes from the three synoptic samples is dominated by the mean circulation. However, its magnitude is not sufficient to account for the float and tracer observations. Therefore, it is necessary to determine the projection of the mean zonal velocities onto the barotropic and the first two baroclinic modes in order to diagnose fully the mean zonal circulation in the western South Atlantic. There is evidence that the representativeness of synoptic hydrographic sections in other regions may be similarly marginal

Turbulence and diapycnal mixing over the East Pacific Rise crest near 10°N

Turbulent mixing plays an important role in the return path of the global overturning circulation of the ocean. Previous measurements indicate that much of the mixing takes place near topography, in particular near seamounts and mid-ocean ridges. Here we report on the first microstructure data set collected over the crest and flanks of a fast-spreading ridge. The data indicate that in spite of weak tidally modulated background turbulence levels (ϵ≈10^-10 W kg^-1) diapycnal diffusivity is elevated above 10^-4 m^2 s^-1 below crest depth of the ridge throughout the entire region because of the weak density stratification. Near the peaks and in the narrow deep passages of a chain of seamounts, where large horizontal velocities have been observed, turbulence levels are elevated by up to an order of magnitude above background. We conclude that topographic organization plays an important role in determining spatial patterns of turbulence in this region and that both tidal and subinertial energy contribute to the mixing

Improving LADCP velocity with external heading, pitch, and roll

Data collected with acoustic Doppler current profilers installed on CTD rosettes and lowered through the water column [lowered ADCP (LADCP) systems] are routinely used to derive full-depth profiles of ocean velocity. In addition to the uncertainties arising from random noise in the along-beam velocity measurements, LADCP-derived velocities are commonly contaminated by bias errors due to imperfectly measured instrument attitude (heading, pitch, and roll). Of particular concern are the heading measurements, because it is not usually feasible to calibrate the internal ADCP compasses with the instruments installed on a CTD rosette, away from the magnetic disturbances of the ship. Heading data from dual-headed LADCP systems, which consist of upward- and downward-pointing ADCPs installed on the same rosette, commonly indicate heading-dependent compass errors with amplitudes exceeding 10°. In an attempt to reduce LADCP velocity errors, several dozen profiles of simultaneous LADCP and magnetometer/accelerometer data were collected in the Gulf of Mexico. Agreement between the LADCP profiles and simultaneous shipboard velocity measurements improves significantly when the former are processed with external attitude measurements. Another set of LADCP profiles with external attitude data was collected in a region of the Arctic Ocean where the horizontal geomagnetic field is too weak for the ADCP compasses to work reliably. Good agreement between shipboard velocity measurements and Arctic LADCP profiles collected at magnetic dip angles exceeding and processed with external attitude measurements indicate that high-quality velocity profiles can be obtained close to the magnetic poles

A novel inactivated virus system (InViS) for a fast and inexpensive assessment of viral disintegration.

The COVID-19 pandemic has caused considerable interest worldwide in antiviral surfaces, and there has been a dramatic increase in the research and development of innovative material systems to reduce virus transmission in the past few years. The International Organization for Standardization (ISO) norms 18,184 and 21,702 are two standard methods to characterize the antiviral properties of porous and non-porous surfaces. However, during the last years of the pandemic, a need for faster and inexpensive characterization of antiviral material was identified. Therefore, a complementary method based on an Inactivated Virus System (InViS) was developed to facilitate the early-stage development of antiviral technologies and quality surveillance of the production of antiviral materials safely and efficiently. The InViS is loaded with a self-quenched fluorescent dye that produces a measurable increase in fluorescence when the viral envelope disintegrates. In the present work, the sensitivity of InViS to viral disintegration by known antiviral agents is demonstrated and its potential to characterize novel materials and surfaces is explored. Finally, the InViS is used to determine the fate of viral particles within facemasks layers, rendering it an interesting tool to support the development of antiviral surface systems for technical and medical applications

Modification of turbulent dissipation rates by a deep Southern Ocean eddy

The impact of a mesoscale eddy on the magnitude and spatial distribution of diapycnal ocean mixing is investigated using a set of hydrographic and microstructure measurements collected in the Southern Ocean. These data sampled a baroclinic, mid-depth eddy formed during the disintegration of a deep boundary current. Turbulent dissipation is suppressed within the eddy, but is elevated by up to an order of magnitude along the upper and lower eddy boundaries. A ray-tracing approximation is employed asa heuristic device to elucidate how the internal wave field evolves in the ambient velocity and stratification conditions accompanying the eddy. These calculations are consistent with the observations, suggesting reflection of internal wave energy from the eddy center and enhanced breaking through critical layer processes along the eddy boundaries. These results have important implications for understanding where and how internal wave energy is dissipated in the presence of energetic deep geostrophic flows

Exploring the ecology of deep-sea hydrothermal vents in a metacommunity framework

© The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Frontiers in Marine Science 5 (2018): 49, doi:10.3389/fmars.2018.00049.Species inhabiting deep-sea hydrothermal vents are strongly influenced by the geological setting, as it provides the chemical-rich fluids supporting the food web, creates the patchwork of seafloor habitat, and generates catastrophic disturbances that can eradicate entire communities. The patches of vent habitat host a network of communities (a metacommunity) connected by dispersal of planktonic larvae. The dynamics of the metacommunity are influenced not only by birth rates, death rates and interactions of populations at the local site, but also by regional influences on dispersal from different sites. The connections to other communities provide a mechanism for dynamics at a local site to affect features of the regional biota. In this paper, we explore the challenges and potential benefits of applying metacommunity theory to vent communities, with a particular focus on effects of disturbance. We synthesize field observations to inform models and identify data gaps that need to be addressed to answer key questions including: (1) what is the influence of the magnitude and rate of disturbance on ecological attributes, such as time to extinction or resilience in a metacommunity; (2) what interactions between local and regional processes control species diversity, and (3) which communities are “hot spots” of key ecological significance. We conclude by assessing our ability to evaluate resilience of vent metacommunities to human disturbance (e.g., deep-sea mining). Although the resilience of a few highly disturbed vent systems in the eastern Pacific has been quantified, these values cannot be generalized to remote locales in the western Pacific or mid Atlantic where disturbance rates are different and information on local controls is missing.LM was supported by NSF OCE 1356738 and DEB 1558904. SB was supported by the NSF DEB 1558904 and the Investment in Science Fund at Woods Hole Oceanographic Institution. MB was supported by the Austrian Science Fund grants P20190-B17 and P16774-B03. LL was supported by NSF OCE 1634172 and the JM Kaplan Fund. MN was supported by NSF DEB 1558904. Y-JW was supported by a Korean Institute of Ocean Science and Technology (KIOST) grant PM60210

Profilin 1 is required for peripheral nervous system myelination

Myelination allows rapid saltatory propagation of action potentials along the axon and is an essential prerequisite for the normal functioning of the nervous system. During peripheral nervous system (PNS) development, myelin-forming Schwann cells (SCs) generate radial lamellipodia to sort and ensheath axons. This process requires controlled cytoskeletal remodeling, and we show that SC lamellipodia formation depends on the function of profilin 1 (Pfn1), an actinbinding protein involved in microfilament polymerization. Pfn1 is inhibited upon phosphorylation by ROCK, a downstream effector of the integrin linked kinase pathway. Thus, a dramatic reduction of radial lamellipodia formation is observed in SCs lacking integrinlinked kinase or treated with the Rho/ROCK activator lysophosphatidic acid. Knocking down Pfn1 expression by lentiviralmediated shRNA delivery impairs SC lamellipodia formation in vitro, suggesting a direct role for this protein in PNS myelination. Indeed,SC-specific gene ablation of Pfn1 in mice led to profound radial sorting and myelination defects, confirming a central role for this protein in PNS development. Our data identify Pfn1 as a key effector of the integrin linked kinase/Rho/ROCK pathway. This pathway, acting in parallel with integrin β1/LCK/Rac1 and their effectors critically regulates SC lamellipodia formation, radial sorting and myelination during peripheral nervous system maturation

Linguistic expert creation in online health practices

In this chapter, we explore how the construction of an expert identity varies across online e-health settings with different socio-technological features. Our methodology is qualitative in nature and draws on insights from discourse analysis, in particular positioning theory. Results show that four aspects of creating expertise are vital: the embeddedness of the posi-tioning strategies in the online health context, the interplay between these strategies within each setting, the interactivity of the medium, and the fact that not only professionals, but also clients and laypeople construct their expertise. The results reveal that previously found strategies to create expertise (e.g., using jargon or showing empathy) could be confirmed in our corpus, and that the interplay of several strategies is in fact needed to create credible and trustworthy expert identities for all participants involved. This interplay varies accord-ing to the practice

Hydrothermal venting at Vailulu'u Seamount : the smoking end of the Samoan chain

Author Posting. © American Geophysical Union, 2004. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geochemistry Geophysics Geosystems 5 (2004): Q02003, doi:10.1029/2003GC000626.The summit crater of Vailulu'u Seamount, the youngest volcano in the Samoan chain, hosts an active hydrothermal system with profound impact on the ocean water column inside and around its crater (2 km wide and 407 m deep at a 593 m summit depth). The turbidity of the ocean water reaches 1.4 NTU, values that are higher than in any other submarine hydrothermal system. The water is enriched in hydrothermal Mn (3.8 ppb) and 3He (1 × 10−11 cc/g) and we measured water temperature anomalies near the crater floor up to 0.2°C. The hydrothermal system shows complex interactions with the ocean currents around Vailulu'u that include tidally-modulated vertical motions of about 40–50 m, and replenishment of waters into the crater through breaches in the upper half of the crater wall. Inside and outside potential density gradients suggest that hydrothermal venting exports substantial amounts of water from the crater (1.3 ± 0.2 × 108 m3/day), which is in good agreement with fluxes obtained from a tracer release experiment inside the crater of Vailulu'u (0.8 × 108 m3/day [Hart et al., 2003]). This mass flux, in combination with the differences in the inside and outside crater temperature, yields a power output of around 760 megawatts, the equivalent of 20–100 MOR black smokers. The Mn output of 300 kg/day is approximately ten times the output of a single black smoker

Aberrant crypt foci in colorectal carcinogenesis. Cell and crypt dynamics

Aberrant crypt foci (ACF) have been identified on the colonic mucosal surface of rodents treated with colon carcinogens and of humans after methylene-blue staining and observation under a light microscope. Several lines of evidence strongly suggest that ACF with certain morphological, histological, cell kinetics, and genetic features are precursor lesions of colon cancer both in rodents and in humans. Thus, ACF represent the earliest step in colorectal carcinogenesis. This paper has the main purpose of reviewing the evidence supporting this view, with particular emphasis on cell and crypt dynamics in ACF. ACF have been used as intermediate biomarkers of cancer development in animal studies aimed at the identification of colon carcinogens and chemopreventive agents. Recently, evidence has also shown that ACF can be effectively employed in chemopreventive studies also in humans