Optical techniques for 3D surface reconstruction in computer-assisted laparoscopic surgery

One of the main challenges for computer-assisted surgery (CAS) is to determine the intra-opera- tive morphology and motion of soft-tissues. This information is prerequisite to the registration of multi-modal patient-specific data for enhancing the surgeon’s navigation capabilites by observ- ing beyond exposed tissue surfaces and for providing intelligent control of robotic-assisted in- struments. In minimally invasive surgery (MIS), optical techniques are an increasingly attractive approach for in vivo 3D reconstruction of the soft-tissue surface geometry. This paper reviews the state-of-the-art methods for optical intra-operative 3D reconstruction in laparoscopic surgery and discusses the technical challenges and future perspectives towards clinical translation. With the recent paradigm shift of surgical practice towards MIS and new developments in 3D opti- cal imaging, this is a timely discussion about technologies that could facilitate complex CAS procedures in dynamic and deformable anatomical regions

Face Centered Image Analysis Using Saliency and Deep Learning Based Techniques

Image analysis starts with the purpose of configuring vision machines that can perceive like human to intelligently infer general principles and sense the surrounding situations from imagery. This dissertation studies the face centered image analysis as the core problem in high level computer vision research and addresses the problem by tackling three challenging subjects: Are there anything interesting in the image? If there is, what is/are that/they? If there is a person presenting, who is he/she? What kind of expression he/she is performing? Can we know his/her age? Answering these problems results in the saliency-based object detection, deep learning structured objects categorization and recognition, human facial landmark detection and multitask biometrics. To implement object detection, a three-level saliency detection based on the self-similarity technique (SMAP) is firstly proposed in the work. The first level of SMAP accommodates statistical methods to generate proto-background patches, followed by the second level that implements local contrast computation based on image self-similarity characteristics. At last, the spatial color distribution constraint is considered to realize the saliency detection. The outcome of the algorithm is a full resolution image with highlighted saliency objects and well-defined edges. In object recognition, the Adaptive Deconvolution Network (ADN) is implemented to categorize the objects extracted from saliency detection. To improve the system performance, L1/2 norm regularized ADN has been proposed and tested in different applications. The results demonstrate the efficiency and significance of the new structure. To fully understand the facial biometrics related activity contained in the image, the low rank matrix decomposition is introduced to help locate the landmark points on the face images. The natural extension of this work is beneficial in human facial expression recognition and facial feature parsing research. To facilitate the understanding of the detected facial image, the automatic facial image analysis becomes essential. We present a novel deeply learnt tree-structured face representation to uniformly model the human face with different semantic meanings. We show that the proposed feature yields unified representation in multi-task facial biometrics and the multi-task learning framework is applicable to many other computer vision tasks

Depth Estimation Using 2D RGB Images

Single image depth estimation is an ill-posed problem. That is, it is not mathematically possible to uniquely estimate the 3rd dimension (or depth) from a single 2D image. Hence, additional constraints need to be incorporated in order to regulate the solution space. As a result, in the first part of this dissertation, the idea of constraining the model for more accurate depth estimation by taking advantage of the similarity between the RGB image and the corresponding depth map at the geometric edges of the 3D scene is explored. Although deep learning based methods are very successful in computer vision and handle noise very well, they suffer from poor generalization when the test and train distributions are not close. While, the geometric methods do not have the generalization problem since they benefit from temporal information in an unsupervised manner. They are sensitive to noise, though. At the same time, explicitly modeling of a dynamic scenes as well as flexible objects in traditional computer vision methods is a big challenge. Considering the advantages and disadvantages of each approach, a hybrid method, which benefits from both, is proposed here by extending traditional geometric models’ abilities to handle flexible and dynamic objects in the scene. This is made possible by relaxing geometric computer vision rules from one motion model for some areas of the scene into one for every pixel in the scene. This enables the model to detect even small, flexible, floating debris in a dynamic scene. However, it makes the optimization under-constrained. To change the optimization from under-constrained to over-constrained while maintaining the model’s flexibility, ”moving object detection loss” and ”synchrony loss” are designed. The algorithm is trained in an unsupervised fashion. The primary results are in no way comparable to the current state of the art. Because the training process is so slow, it is difficult to compare it to the current state of the art. Also, the algorithm lacks stability. In addition, the optical flow model is extremely noisy and naive. At the end, some solutions are suggested to address these issues

Intelligent image cropping and scaling

This thesis was submitted for the degree of Doctor of Philosophy and awarded by Brunel University, 2011.Nowadays, there exist a huge number of end devices with different screen properties for watching television content, which is either broadcasted or transmitted over the internet. To allow best viewing conditions on each of these devices, different image formats have to be provided by the broadcaster. Producing content for every single format is, however, not applicable by the broadcaster as it is much too laborious and costly. The most obvious solution for providing multiple image formats is to produce one high resolution format and prepare formats of lower resolution from this. One possibility to do this is to simply scale video images to the resolution of the target image format. Two significant drawbacks are the loss of image details through ownscaling and possibly unused image areas due to letter- or pillarboxes. A preferable solution is to find the contextual most important region in the high-resolution format at first and crop this area with an aspect ratio of the target image format afterwards. On the other hand, defining the contextual most important region manually is very time consuming. Trying to apply that to live productions would be nearly impossible. Therefore, some approaches exist that automatically define cropping areas. To do so, they extract visual features, like moving reas in a video, and define regions of interest (ROIs) based on those. ROIs are finally used to define an enclosing cropping area. The extraction of features is done without any knowledge about the type of content. Hence, these approaches are not able to distinguish between features that might be important in a given context and those that are not. The work presented within this thesis tackles the problem of extracting visual features based on prior knowledge about the content. Such knowledge is fed into the system in form of metadata that is available from TV production environments. Based on the extracted features, ROIs are then defined and filtered dependent on the analysed content. As proof-of-concept, this application finally adapts SDTV (Standard Definition Television) sports productions automatically to image formats with lower resolution through intelligent cropping and scaling. If no content information is available, the system can still be applied on any type of content through a default mode. The presented approach is based on the principle of a plug-in system. Each plug-in represents a method for analysing video content information, either on a low level by extracting image features or on a higher level by processing extracted ROIs. The combination of plug-ins is determined by the incoming descriptive production metadata and hence can be adapted to each type of sport individually. The application has been comprehensively evaluated by comparing the results of the system against alternative cropping methods. This evaluation utilised videos which were manually cropped by a professional video editor, statically cropped videos and simply scaled, non-cropped videos. In addition to and apart from purely subjective evaluations, the gaze positions of subjects watching sports videos have been measured and compared to the regions of interest positions extracted by the system

A Survey on Ear Biometrics

Recognizing people by their ear has recently received significant attention in the literature. Several reasons account for this trend: first, ear recognition does not suffer from some problems associated with other non contact biometrics, such as face recognition; second, it is the most promising candidate for combination with the face in the context of multi-pose face recognition; and third, the ear can be used for human recognition in surveillance videos where the face may be occluded completely or in part. Further, the ear appears to degrade little with age. Even though, current ear detection and recognition systems have reached a certain level of maturity, their success is limited to controlled indoor conditions. In addition to variation in illumination, other open research problems include hair occlusion; earprint forensics; ear symmetry; ear classification; and ear individuality. This paper provides a detailed survey of research conducted in ear detection and recognition. It provides an up-to-date review of the existing literature revealing the current state-of-art for not only those who are working in this area but also for those who might exploit this new approach. Furthermore, it offers insights into some unsolved ear recognition problems as well as ear databases available for researchers

Dense Vision in Image-guided Surgery

Image-guided surgery needs an efficient and effective camera tracking system in order to perform augmented reality for overlaying preoperative models or label cancerous tissues on the 2D video images of the surgical scene. Tracking in endoscopic/laparoscopic scenes however is an extremely difficult task primarily due to tissue deformation, instrument invasion into the surgical scene and the presence of specular highlights. State of the art feature-based SLAM systems such as PTAM fail in tracking such scenes since the number of good features to track is very limited. When the scene is smoky and when there are instrument motions, it will cause feature-based tracking to fail immediately. The work of this thesis provides a systematic approach to this problem using dense vision. We initially attempted to register a 3D preoperative model with multiple 2D endoscopic/laparoscopic images using a dense method but this approach did not perform well. We subsequently proposed stereo reconstruction to directly obtain the 3D structure of the scene. By using the dense reconstructed model together with robust estimation, we demonstrate that dense stereo tracking can be incredibly robust even within extremely challenging endoscopic/laparoscopic scenes. Several validation experiments have been conducted in this thesis. The proposed stereo reconstruction algorithm has turned out to be the state of the art method for several publicly available ground truth datasets. Furthermore, the proposed robust dense stereo tracking algorithm has been proved highly accurate in synthetic environment (< 0.1 mm RMSE) and qualitatively extremely robust when being applied to real scenes in RALP prostatectomy surgery. This is an important step toward achieving accurate image-guided laparoscopic surgery.Open Acces

Computerized Evaluatution of Microsurgery Skills Training

The style of imparting medical training has evolved, over the years. The traditional methods of teaching and practicing basic surgical skills under apprenticeship model, no longer occupy the first place in modern technically demanding advanced surgical disciplines like neurosurgery. Furthermore, the legal and ethical concerns for patient safety as well as cost-effectiveness have forced neurosurgeons to master the necessary microsurgical techniques to accomplish desired results. This has lead to increased emphasis on assessment of clinical and surgical techniques of the neurosurgeons. However, the subjective assessment of microsurgical techniques like micro-suturing under the apprenticeship model cannot be completely unbiased. A few initiatives using computer-based techniques, have been made to introduce objective evaluation of surgical skills. This thesis presents a novel approach involving computerized evaluation of different components of micro-suturing techniques, to eliminate the bias of subjective assessment. The work involved acquisition of cine clips of micro-suturing activity on synthetic material. Image processing and computer vision based techniques were then applied to these videos to assess different characteristics of micro-suturing viz. speed, dexterity and effectualness. In parallel subjective grading on these was done by a senior neurosurgeon. Further correlation and comparative study of both the assessments was done to analyze the efficacy of objective and subjective evaluation