Skew-Aware Collective Communication for MapReduce Shuffling

This paper proposes and examines the three in-memory shuffling methods designed to address problems in MapReduce shuffling caused by skewed data. Coupled Shuffle Architecture (CSA) employs a single pairwise all-to-all exchange to shuffle both blocks, units of shuffle transfer, and meta-blocks, which contain the metadata of corresponding blocks. Decoupled Shuffle Architecture (DSA) separates the shuffling of meta-blocks and blocks, and applies different all-to-all exchange algorithms to each shuffling process, attempting to mitigate the impact of stragglers in strongly skewed distributions. Decoupled Shuffle Architecture with Skew-Aware Meta-Shuffle (DSA w/ SMS) autonomously determines the proper placement of blocks based on the memory consumption of each worker process. This approach targets extremely skewed situations where some worker processes could exceed their node memory limitation. This study evaluates implementations of the three shuffling methods in our prototype in-memory MapReduce engine, which employs high performance interconnects such as InfiniBand and Intel Omni-Path. Our results suggest that DSA w/ SMS is the only viable solution for extremely skewed data distributions. We also present a detailed investigation of the performance of CSA and DSA in various skew situations

Improvement of Data-Intensive Applications Running on Cloud Computing Clusters

MapReduce, designed by Google, is widely used as the most popular distributed programming model in cloud environments. Hadoop, an open-source implementation of MapReduce, is a data management framework on large cluster of commodity machines to handle data-intensive applications. Many famous enterprises including Facebook, Twitter, and Adobe have been using Hadoop for their data-intensive processing needs. Task stragglers in MapReduce jobs dramatically impede job execution on massive datasets in cloud computing systems. This impedance is due to the uneven distribution of input data and computation load among cluster nodes, heterogeneous data nodes, data skew in reduce phase, resource contention situations, and network configurations. All these reasons may cause delay failure and the violation of job completion time. One of the key issues that can significantly affect the performance of cloud computing is the computation load balancing among cluster nodes. Replica placement in Hadoop distributed file system plays a significant role in data availability and the balanced utilization of clusters. In the current replica placement policy (RPP) of Hadoop distributed file system (HDFS), the replicas of data blocks cannot be evenly distributed across cluster\u27s nodes. The current HDFS must rely on a load balancing utility for balancing the distribution of replicas, which results in extra overhead for time and resources. This dissertation addresses data load balancing problem and presents an innovative replica placement policy for HDFS. It can perfectly balance the data load among cluster\u27s nodes. The heterogeneity of cluster nodes exacerbates the issue of computational load balancing; therefore, another replica placement algorithm has been proposed in this dissertation for heterogeneous cluster environments. The timing of identifying the straggler map task is very important for straggler mitigation in data-intensive cloud computing. To mitigate the straggler map task, Present progress and Feedback based Speculative Execution (PFSE) algorithm has been proposed in this dissertation. PFSE is a new straggler identification scheme to identify the straggler map tasks based on the feedback information received from completed tasks beside the progress of the current running task. Straggler reduce task aggravates the violation of MapReduce job completion time. Straggler reduce task is typically the result of bad data partitioning during the reduce phase. The Hash partitioner employed by Hadoop may cause intermediate data skew, which results in straggler reduce task. In this dissertation a new partitioning scheme, named Balanced Data Clusters Partitioner (BDCP), is proposed to mitigate straggler reduce tasks. BDCP is based on sampling of input data and feedback information about the current processing task. BDCP can assist in straggler mitigation during the reduce phase and minimize the job completion time in MapReduce jobs. The results of extensive experiments corroborate that the algorithms and policies proposed in this dissertation can improve the performance of data-intensive applications running on cloud platforms

Understanding Spark Performance in Hybrid and Multi-Site Clouds

International audienceRecently, hybrid multi-site big data analytics (that combines on-premise with off-premise resources) has gained increasing popularity as a tool to process large amounts of data on-demand, without additional capital investment to increase the size of a single datacenter. However, making the most out of hybrid setups for big data analytics is challenging because on-premise resources can communicate with off-premise resources at significantly lower throughput and higher latency. Understanding the impact of this aspect is not trivial, especially in the context of modern big data an-alytics frameworks that introduce complex communication patterns and are optimized to overlap communication with computation in order to hide data transfer latencies. This paper contributes with a work-in-progress study that aims to identify and explain this impact in relationship to the known behavior on a single cloud. To this end, it analyses a representative big data workload on a hybrid Spark setup. Unlike previous experience that emphasized low end-impact of network communications in Spark, we found significant overhead in the shuffle phase when the bandwidth between the on-premise and off-premise resources is sufficiently small

Load Balancing Algorithms for Parallel Spatial Join on HPC Platforms

Geospatial datasets are growing in volume, complexity, and heterogeneity. For efficient execution of geospatial computations and analytics on large scale datasets, parallel processing is necessary. To exploit fine-grained parallel processing on large scale compute clusters, partitioning of skewed datasets in a load-balanced way is challenging. The workload in spatial join is data dependent and highly irregular. Moreover, wide variation in the size and density of geometries from one region of the map to another, further exacerbates the load imbalance. This dissertation focuses on spatial join operation used in Geographic Information Systems (GIS) and spatial databases, where the inputs are two layers of geospatial data, and the output is a combination of the two layers according to join predicate.This dissertation introduces a novel spatial data partitioning algorithm geared towards load balancing the parallel spatial join processing. Unlike existing partitioning techniques, the proposed partitioning algorithm divides the spatial join workload instead of partitioning the individual datasets separately to provide better load-balancing. This workload partitioning algorithm has been evaluated on a high-performance computing system using real-world datasets. An intermediate output-sensitive duplication avoidance technique is proposed that decreases the external memory space requirement for storing spatial join candidates across the partitions. GPU acceleration is used to further reduce the spatial partitioning runtime. For dynamic load balancing in spatial join, a novel framework for fine-grained work stealing is presented. This framework is efficient and NUMA-aware. Performance improvements are demonstrated on shared and distributed memory architectures using threads and message passing. Experimental results show effective mitigation of data skew. The framework supports a variety of spatial join predicates and spatial overlay using partitioned and un-partitioned datasets

Scalable Architecture for Integrated Batch and Streaming Analysis of Big Data

Thesis (Ph.D.) - Indiana University, Computer Sciences, 2015As Big Data processing problems evolve, many modern applications demonstrate special characteristics. Data exists in the form of both large historical datasets and high-speed real-time streams, and many analysis pipelines require integrated parallel batch processing and stream processing. Despite the large size of the whole dataset, most analyses focus on specific subsets according to certain criteria. Correspondingly, integrated support for efficient queries and post- query analysis is required. To address the system-level requirements brought by such characteristics, this dissertation proposes a scalable architecture for integrated queries, batch analysis, and streaming analysis of Big Data in the cloud. We verify its effectiveness using a representative application domain - social media data analysis - and tackle related research challenges emerging from each module of the architecture by integrating and extending multiple state-of-the-art Big Data storage and processing systems. In the storage layer, we reveal that existing text indexing techniques do not work well for the unique queries of social data, which put constraints on both textual content and social context. To address this issue, we propose a flexible indexing framework over NoSQL databases to support fully customizable index structures, which can embed necessary social context information for efficient queries. The batch analysis module demonstrates that analysis workflows consist of multiple algorithms with different computation and communication patterns, which are suitable for different processing frameworks. To achieve efficient workflows, we build an integrated analysis stack based on YARN, and make novel use of customized indices in developing sophisticated analysis algorithms. In the streaming analysis module, the high-dimensional data representation of social media streams poses special challenges to the problem of parallel stream clustering. Due to the sparsity of the high-dimensional data, traditional synchronization method becomes expensive and severely impacts the scalability of the algorithm. Therefore, we design a novel strategy that broadcasts the incremental changes rather than the whole centroids of the clusters to achieve scalable parallel stream clustering algorithms. Performance tests using real applications show that our solutions for parallel data loading/indexing, queries, analysis tasks, and stream clustering all significantly outperform implementations using current state-of-the-art technologies

Contribution à la convergence d'infrastructure entre le calcul haute performance et le traitement de données à large échelle

The amount of produced data, either in the scientific community or the commercialworld, is constantly growing. The field of Big Data has emerged to handle largeamounts of data on distributed computing infrastructures. High-Performance Computing (HPC) infrastructures are traditionally used for the execution of computeintensive workloads. However, the HPC community is also facing an increasingneed to process large amounts of data derived from high definition sensors andlarge physics apparati. The convergence of the two fields -HPC and Big Data- iscurrently taking place. In fact, the HPC community already uses Big Data tools,which are not always integrated correctly, especially at the level of the file systemand the Resource and Job Management System (RJMS).In order to understand how we can leverage HPC clusters for Big Data usage, andwhat are the challenges for the HPC infrastructures, we have studied multipleaspects of the convergence: We initially provide a survey on the software provisioning methods, with a focus on data-intensive applications. We contribute a newRJMS collaboration technique called BeBiDa which is based on 50 lines of codewhereas similar solutions use at least 1000 times more. We evaluate this mechanism on real conditions and in simulated environment with our simulator Batsim.Furthermore, we provide extensions to Batsim to support I/O, and showcase thedevelopments of a generic file system model along with a Big Data applicationmodel. This allows us to complement BeBiDa real conditions experiments withsimulations while enabling us to study file system dimensioning and trade-offs.All the experiments and analysis of this work have been done with reproducibilityin mind. Based on this experience, we propose to integrate the developmentworkflow and data analysis in the reproducibility mindset, and give feedback onour experiences with a list of best practices.RésuméLa quantité de données produites, que ce soit dans la communauté scientifiqueou commerciale, est en croissance constante. Le domaine du Big Data a émergéface au traitement de grandes quantités de données sur les infrastructures informatiques distribuées. Les infrastructures de calcul haute performance (HPC) sont traditionnellement utilisées pour l’exécution de charges de travail intensives en calcul. Cependant, la communauté HPC fait également face à un nombre croissant debesoin de traitement de grandes quantités de données dérivées de capteurs hautedéfinition et de grands appareils physique. La convergence des deux domaines-HPC et Big Data- est en cours. En fait, la communauté HPC utilise déjà des outilsBig Data, qui ne sont pas toujours correctement intégrés, en particulier au niveaudu système de fichiers ainsi que du système de gestion des ressources (RJMS).Afin de comprendre comment nous pouvons tirer parti des clusters HPC pourl’utilisation du Big Data, et quels sont les défis pour les infrastructures HPC, nousavons étudié plusieurs aspects de la convergence: nous avons d’abord proposé uneétude sur les méthodes de provisionnement logiciel, en mettant l’accent sur lesapplications utilisant beaucoup de données. Nous contribuons a l’état de l’art avecune nouvelle technique de collaboration entre RJMS appelée BeBiDa basée sur 50lignes de code alors que des solutions similaires en utilisent au moins 1000 fois plus.Nous évaluons ce mécanisme en conditions réelles et en environnement simuléavec notre simulateur Batsim. En outre, nous fournissons des extensions à Batsimpour prendre en charge les entrées/sorties et présentons le développements d’unmodèle de système de fichiers générique accompagné d’un modèle d’applicationBig Data. Cela nous permet de compléter les expériences en conditions réellesde BeBiDa en simulation tout en étudiant le dimensionnement et les différentscompromis autours des systèmes de fichiers.Toutes les expériences et analyses de ce travail ont été effectuées avec la reproductibilité à l’esprit. Sur la base de cette expérience, nous proposons d’intégrerle flux de travail du développement et de l’analyse des données dans l’esprit dela reproductibilité, et de donner un retour sur nos expériences avec une liste debonnes pratiques

Big Data Analytics for Wireless and Wired Network Design: A Survey

Currently, the world is witnessing a mounting avalanche of data due to the increasing number of mobile network subscribers, Internet websites, and online services. This trend is continuing to develop in a quick and diverse manner in the form of big data. Big data analytics can process large amounts of raw data and extract useful, smaller-sized information, which can be used by different parties to make reliable decisions. In this paper, we conduct a survey on the role that big data analytics can play in the design of data communication networks. Integrating the latest advances that employ big data analytics with the networks’ control/traffic layers might be the best way to build robust data communication networks with refined performance and intelligent features. First, the survey starts with the introduction of the big data basic concepts, framework, and characteristics. Second, we illustrate the main network design cycle employing big data analytics. This cycle represents the umbrella concept that unifies the surveyed topics. Third, there is a detailed review of the current academic and industrial efforts toward network design using big data analytics. Forth, we identify the challenges confronting the utilization of big data analytics in network design. Finally, we highlight several future research directions. To the best of our knowledge, this is the first survey that addresses the use of big data analytics techniques for the design of a broad range of networks