BioMEMS

As technological advancements widen the scope of applications for biomicroelectromechanical systems (BioMEMS or biomicrosystems), the field continues to have an impact on many aspects of life science operations and functionalities. Because BioMEMS research and development require the input of experts who use different technical languages and come from varying disciplines and backgrounds, scientists and students can avoid potential difficulties in communication and understanding only if they possess a skill set and understanding that enables them to work at the interface of engineering and biosciences. Keeping this duality in mind throughout, BioMEMS: Science and Engineering Perspectives supports and expedites the multidisciplinary learning involved in the development of biomicrosystems. Divided into nine chapters, it starts with a balanced introduction of biological, engineering, application, and commercialization aspects of the field. With a focus on molecules of biological interest, the book explores the building blocks of cells and viruses, as well as molecules that form the self-assembled monolayers (SAMs), linkers, and hydrogels used for making different surfaces biocompatible through functionalization. The book also discusses: Different materials and platforms used to develop biomicrosystems Various biological entities and pathogens (in ascending order of complexity) The multidisciplinary aspects of engineering bioactive surfaces Engineering perspectives, including methods of manufacturing bioactive surfaces and devices Microfluidics modeling and experimentation Device level implementation of BioMEMS concepts for different applications. Because BioMEMS is an application-driven field, the book also highlights the concepts of lab-on-a-chip (LOC) and micro total analysis system (μTAS), along with their pertinence to the emerging point-of-care (POC) and point-of-need (PON) applications

Nucleic Acid-based Detection of Bacterial Pathogens Using Integrated Microfluidic Platform Systems

The advent of nucleic acid-based pathogen detection methods offers increased sensitivity and specificity over traditional microbiological techniques, driving the development of portable, integrated biosensors. The miniaturization and automation of integrated detection systems presents a significant advantage for rapid, portable field-based testing. In this review, we highlight current developments and directions in nucleic acid-based micro total analysis systems for the detection of bacterial pathogens. Recent progress in the miniaturization of microfluidic processing steps for cell capture, DNA extraction and purification, polymerase chain reaction, and product detection are detailed. Discussions include strategies and challenges for implementation of an integrated portable platform

Electrochemical Biosensors for On-line Monitoring of Cell Culture Metabolism

Current research in the biotechnological field is hampered by the lack of available technologies dedicated to cell monitoring. While on the one hand physicochemical parameters, such as pH, temperature, cell density and adhesion, can be monitored quite easily with automated systems, on the other the variation of cell metabolism is still challenging. Indeed, the real-time detection of metabolites can noticeably extend the knowledge of the molecular biology for therapeutic purposes, as well as for the investigation of several types of diseases. Electrochem- ical biosensors are the ideal candidates for cell monitoring, since they can be integrated with the electronic portion of the system, leading to high-density arrays of biosensors with better performance in terms of signal-to-noise ratio, sensor response, and sample volumes. The present research covers the design, the fabrication, the characterization, and the valida- tion of a minimally-invasive system for the real-time monitoring of different metabolites in a cell culture. The electrochemical biosensor consists of an array of gold working electrodes accomplished by standard microfabrication processes. The deposition of carbon nanotubes and the selective modification with enzymes onto metallic electrodes is performed by adapt- ing an ultra-low volume dispensing system for DNA and protein drop cast. The biological sensing element ensures high selectivity for the target molecule to detect, while nanomate- rials confer superior performance (e.g. sensitivity) with respect to standard immobilization strategies. The on-line detection of glucose, lactate, and glutamate is achieved with an ad hoc fluidic system. The use of a microdialysis probe in direct contact with the cell culture avoids contamination problems and dilution steps for metabolite measurements. Carbon nanotube-based biosensors and the system for real-time measurements are validated on two cell lines under different experimental conditions. The electronic system for electrochemical measurements is also designed and realized with discrete components to be interfaced with the platform. The adopted architecture is able to optimally record the current ranges involved in the electrochemical cell, while the wireless communication between the electronic system and the remote station ensures minimally invasiveness and high portability of the device. Existing technologies and materials are used in an original manner to achieve the on-line monitoring of metabolites in stem cell-like cultures, paving the way for the development of miniaturized, high-sensitive, and inexpensive devices for continuous cell monitoring

Progress in fluorescence biosensing and food safety towards point-of-detection (PoD) system

The detection of pathogens in food substances is of crucial concern for public health and for the safety of the natural environment. Nanomaterials, with their high sensitivity and selectivity have an edge over conventional organic dyes in fluorescent-based detection methods. Advances in microfluidic technology in biosensors have taken place to meet the user criteria of sensitive, inexpensive, user-friendly, and quick detection. In this review, we have summarized the use of fluorescence-based nanomaterials and the latest research approaches towards integrated biosensors, including microsystems containing fluorescence-based detection, various model systems with nano materials, DNA probes, and antibodies. Paper-based lateral-flow test strips and microchips as well as the most-used trapping components are also reviewed, and the possibility of their performance in portable devices evaluated. We also present a current market-available portable system which was developed for food screening and highlight the future direction for the development of fluorescence-based systems for on-site detection and stratification of common foodborne pathogens

Glassy Materials Based Microdevices

Microtechnology has changed our world since the last century, when silicon microelectronics revolutionized sensor, control and communication areas, with applications extending from domotics to automotive, and from security to biomedicine. The present century, however, is also seeing an accelerating pace of innovation in glassy materials; as an example, glass-ceramics, which successfully combine the properties of an amorphous matrix with those of micro- or nano-crystals, offer a very high flexibility of design to chemists, physicists and engineers, who can conceive and implement advanced microdevices. In a very similar way, the synthesis of glassy polymers in a very wide range of chemical structures offers unprecedented potential of applications. The contemporary availability of microfabrication technologies, such as direct laser writing or 3D printing, which add to the most common processes (deposition, lithography and etching), facilitates the development of novel or advanced microdevices based on glassy materials. Biochemical and biomedical sensors, especially with the lab-on-a-chip target, are one of the most evident proofs of the success of this material platform. Other applications have also emerged in environment, food, and chemical industries. The present Special Issue of Micromachines aims at reviewing the current state-of-the-art and presenting perspectives of further development. Contributions related to the technologies, glassy materials, design and fabrication processes, characterization, and, eventually, applications are welcome

Hybrid microfluidic CMOS capacitive sensors for lab-on-chip applications

Methods and applications of CMOS-based Locs -- Hybrid microfluidic/cmos platform -- Cmos based capacitive sensors for locs -- Direct-write microfluidic packaging procedure -- Core-cbcm capacitive sensor array for locs

Development and Applications of Advanced Materials Based Biosensors

Ph.DDOCTOR OF PHILOSOPH

Development of electrochemical platforms for DNA sensing

[eng] The present doctoral thesis is framed in the research and development (R & D) project between a private biotechnology company of molecular diagnostics Genomica SAU, the Institute for Bioengineering of Catalonia (IBEC), the University of Barcelona, and the Microfluidics ChipShop Company. The main objective of the project is making, implementation and marketing of a diagnostic device for early detection of DNA sequences involved with cancer. The multi device, or lab-on-chip (LOC), consists of a central automation unit (CAU), a system in miniature of DNA amplification or chain reaction polymerase (mini-PCR), and a biosensing platform (DNA chip) that consisting of a matrix or electrochemical array. The three elements are integrated by a microfluidic system in sandwich format cartridge. For this purpose, the aim of this thesis was the creation, characterization and optimization of the biochemical recognition platform between two single strands of DNA of dissimilar lengths but with some complementary sequences for the subsequent electrochemical detection of a hybridization event between them. Then, the integration into the cartridge of above platform was done. For the creation of this platform, we chose to use a self-assembled monolayer (SAM) of thiols as biorecognition interface of the 14 DNA sequences that are part of the project. During optimization of the interface chips individual gold and various molecules were used being chosen the molecule with two arms disulfide of polyethylene glycol (PEG) and a malaimida group at the end of one of them. This linker (or MalPEG linker) reacts with the gold surface due to the dative interaction between the sulfur atoms of the disulfide and the gold atoms from the surface of the chips. At the same time, the malaimida group reacts with the thiol group of the capture probes, joining. The PEG groups function as anti-adhesion molecules. Surface plasmon resonance (SPR) and cyclic voltammetry (CV) were techniques used to characterize the substrate and the hybridization event. For the manufacture of the cartridge, this was divided into two main blocks, the biosensing or electrochemical block and PCR block. The electrochemical block is composed of 4 layers, one of 64 working electrodes and gold paths for contact with the potentiostat, another layer that defines the area of the sensors must be functionalized gold and isolating the gold surface of the tracks. The third layer is a double-sided adhesive that has a hexagonal hole working as hybridization chamber, and the last layer is a screen printing layer with the reference electrode (RE) and counter electrodes. The above layers form an electrochemical cell wherein the hybridization will occurs. Regarding the PCR block, this is a system of two layers with a type microfluidic channel kind loop and its function is to contain the solutions during the process of DNA amplification by the mini-PCR. During the integration of the optimized SAM into an electrochemical cartridge a manual and automated ways were used to immobilize the capture probes. Several tests were performed in order to obtain the best conditions and ratios between the molecules to maximize the hybridization signal during the electrochemical detection.[spa] El presente trabajo de tesis está enmarcado en un proyecto de investigación y desarrollo (I+D) entre la empresa privada Genomica S.A.U., el Instituto de Bioingeniería de Cataluña (IBEC), la Universidad de Barcelona y la empresa alemana ChipShop Microfluidics. El objetivo principal es el desarrollo, puesta a punto y comercialización de un dispositivo electroquímico de diagnóstico médico para etapas tempranas de cáncer. El objetivo de la tesis es la creación, optimización y posterior integración de una interfaz de biosensado de ADN en el dispositivo de diagnóstico, siendo pieza fundamental en el desarrollo de éste. La interfaz escogida fue una monocapa autoensamblada (SAM) que hace las veces de biosensor y que es capaz de anclar secuencias de ADN como sondas de captura y así poder detectar, selectivamente, las secuencias objetivo complementarias. El dispositivo también cuenta con un sistema microfluídico y un sistema de amplificación de ADN de reacción en cadena de la polimerasa en miniatura. La SAM esta inmovilizada en un array electroquímico que consta de 64 electrodos de trabajo que funcionan como elemento transductor de la señal electroquímica redox de los eventos de hibridación que ocurren sobre ellos. La funcionalización y puesta a punto del dispositivo se llevó a cabo inmovilizando múltiples sondas de captura después de una optimización de las concentraciones entre las diferentes partes constituyentes de la monocapa. Técnicas ópticas y electroquímicas fueron utilizadas para la caracterización de cada etapa y técnicas de fotolitografiado y de impresión por pantalla fueron utilizadas para la fabricación de los componentes del dispositivo. Finalmente, y después de algunos cambios surgidos durante el desarrollo del dispositivo, se llega a un diseño final y a las pruebas con muestras reales, proceso que aún está en etapa experimental

Self-powered mobile sensor for in-pipe potable water quality monitoring

Traditional stationary sensors for potable-water quality monitoring in a wireless sensor network format allow for continuous data collection and transfer. These stationary sensors have played a key role in reporting contamination events in order to secure public health. We are developing a self-powered mobile sensor that can move with the water flow, allowing real-time detection of contamination in water distribution pipes, with a higher temporal resolution. Functionality of the mobile sensor was tested for detecting and monitoring pH, Ca2+, Mg2+, HCO3-/CO32-, NH4+, and Clions. Moreover, energy harvest and wireless data transmission capabilities are being designed for the mobile sensor