1,858 research outputs found
Active contour method for ILM segmentation in ONH volume scans in retinal OCT
The optic nerve head (ONH) is affected by many neurodegenerative and autoimmune inflammatory conditions. Optical coherence tomography can acquire high-resolution 3D ONH scans. However, the ONH's complex anatomy and pathology make image segmentation challenging. This paper proposes a robust approach to segment the inner limiting membrane (ILM) in ONH volume scans based on an active contour method of Chan-Vese type, which can work in challenging topological structures. A local intensity fitting energy is added in order to handle very inhomogeneous image intensities. A suitable boundary potential is introduced to avoid structures belonging to outer retinal layers being detected as part of the segmentation. The average intensities in the inner and outer region are then resealed locally to account for different brightness values occurring among the ONH center. The appropriate values for the parameters used in the complex computational model are found using an optimization based on the differential evolution algorithm. The evaluation of results showed that the proposed framework significantly improved segmentation results compared to the commercial solution
An advanced level set method based on Bregman divergence for inhomogeneous image segmentation
© 2017 IEEE. Intensity inhomogeneity often occurs in real images. Local information based level set methods are comparatively effective in segmenting image with inhomogeneous intensity. However, in practice, these models suffer from local minima and high computational cost. In this paper, a novel region-based level set method based on Bregman divergence and local binary fitting, hereafter referred to as Bregman-LBF, is proposed for image segmentation. The proposed method utilizes global and local information to formulate a new energy function. The Bregman-LBF model enjoys the following advantages: (1) Bregman-LBF outperforms the piece-wise constant(PC) model in handling intensity inhomogeneity. (2) Bregman-LBF is more effective than the local binary fitting (LBF) model and more robust than the global and local intensity fitting (GLIF) model. The relationship between the Bregman-LBF model and the existing models, e.g. the Chan-Vese(CV) model, is discussed. The experiments conducted on synthetic and benchmark image datasets have shown that the proposed Bregman-LBF outperforms the piece-wise constant (PC) model in handling intensity inhomogeneity. The experimental results have also shown that the Bregman-LBF is more effective than the local binary fitting (LBF) model and more robust than the global and local intensity fitting (GLIF) model
Active Contour Models for Manifold Valued Image Segmentation
Image segmentation is the process of partitioning a image into different
regions or groups based on some characteristics like color, texture, motion or
shape etc. Active contours is a popular variational method for object
segmentation in images, in which the user initializes a contour which evolves
in order to optimize an objective function designed such that the desired
object boundary is the optimal solution. Recently, imaging modalities that
produce Manifold valued images have come up, for example, DT-MRI images, vector
fields. The traditional active contour model does not work on such images. In
this paper, we generalize the active contour model to work on Manifold valued
images. As expected, our algorithm detects regions with similar Manifold values
in the image. Our algorithm also produces expected results on usual gray-scale
images, since these are nothing but trivial examples of Manifold valued images.
As another application of our general active contour model, we perform texture
segmentation on gray-scale images by first creating an appropriate Manifold
valued image. We demonstrate segmentation results for manifold valued images
and texture images
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Statistical Region Based Segmentation of Ultrasound Images
Segmentation of ultrasound images is a challenging problem due to speckle, which
corrupts the image and can result in weak or missing image boundaries, poor signal to
noise ratio, and diminished contrast resolution. Speckle is a random interference pattern
that is characterized by an asymmetric distribution as well as significant spatial correla-
tion. These attributes of speckle are challenging to model in a segmentation approach, so
many previous ultrasound segmentation methods simplify the problem by assuming that
the speckle is white and/or Gaussian distributed. Unlike these methods, in this paper
we present an ultrasound-specific segmentation approach that addresses both the spatial
correlation of the data as well as its intensity distribution. We first decorrelate the image
and then apply a region-based active contour whose motion is derived from an appropri-
ate parametric distribution for maximum likelihood image segmentation. We consider
zero-mean complex Gaussian, Rayleigh, and Fisher-Tippett flows, which are designed
to model fully formed speckle in the in-phase/quadrature (IQ), envelope detected, and
display (log compressed) images, respectively. We present experimental results demon-
strating the effectiveness of our method, and compare the results to other parametric
and non-parametric active contours
Active Mean Fields for Probabilistic Image Segmentation: Connections with Chan-Vese and Rudin-Osher-Fatemi Models
Segmentation is a fundamental task for extracting semantically meaningful
regions from an image. The goal of segmentation algorithms is to accurately
assign object labels to each image location. However, image-noise, shortcomings
of algorithms, and image ambiguities cause uncertainty in label assignment.
Estimating the uncertainty in label assignment is important in multiple
application domains, such as segmenting tumors from medical images for
radiation treatment planning. One way to estimate these uncertainties is
through the computation of posteriors of Bayesian models, which is
computationally prohibitive for many practical applications. On the other hand,
most computationally efficient methods fail to estimate label uncertainty. We
therefore propose in this paper the Active Mean Fields (AMF) approach, a
technique based on Bayesian modeling that uses a mean-field approximation to
efficiently compute a segmentation and its corresponding uncertainty. Based on
a variational formulation, the resulting convex model combines any
label-likelihood measure with a prior on the length of the segmentation
boundary. A specific implementation of that model is the Chan-Vese segmentation
model (CV), in which the binary segmentation task is defined by a Gaussian
likelihood and a prior regularizing the length of the segmentation boundary.
Furthermore, the Euler-Lagrange equations derived from the AMF model are
equivalent to those of the popular Rudin-Osher-Fatemi (ROF) model for image
denoising. Solutions to the AMF model can thus be implemented by directly
utilizing highly-efficient ROF solvers on log-likelihood ratio fields. We
qualitatively assess the approach on synthetic data as well as on real natural
and medical images. For a quantitative evaluation, we apply our approach to the
icgbench dataset
Automated detection of extended sources in radio maps: progress from the SCORPIO survey
Automated source extraction and parameterization represents a crucial
challenge for the next-generation radio interferometer surveys, such as those
performed with the Square Kilometre Array (SKA) and its precursors. In this
paper we present a new algorithm, dubbed CAESAR (Compact And Extended Source
Automated Recognition), to detect and parametrize extended sources in radio
interferometric maps. It is based on a pre-filtering stage, allowing image
denoising, compact source suppression and enhancement of diffuse emission,
followed by an adaptive superpixel clustering stage for final source
segmentation. A parameterization stage provides source flux information and a
wide range of morphology estimators for post-processing analysis. We developed
CAESAR in a modular software library, including also different methods for
local background estimation and image filtering, along with alternative
algorithms for both compact and diffuse source extraction. The method was
applied to real radio continuum data collected at the Australian Telescope
Compact Array (ATCA) within the SCORPIO project, a pathfinder of the ASKAP-EMU
survey. The source reconstruction capabilities were studied over different test
fields in the presence of compact sources, imaging artefacts and diffuse
emission from the Galactic plane and compared with existing algorithms. When
compared to a human-driven analysis, the designed algorithm was found capable
of detecting known target sources and regions of diffuse emission,
outperforming alternative approaches over the considered fields.Comment: 15 pages, 9 figure
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