Contribution of epilithic diatoms to benthic−pelagic coupling in a temperate river

Water residence time in the middle course of rivers is often too short to allow substantial phytoplankton development, and primary production is essentially provided by benthic phototrophic biofilms. However, cells occurring in the water column might derive from biofilm microalgae, and, reciprocally, sedimenting microalgae could represent a continuous source of colonizers for benthic biofilms. A comparative study of biofilm and pelagic microphytic communities (with special focus on diatoms) was carried out over 15 mo in the Garonne River, France. Diatoms dominated both biofilm and pelagic microphytic communities. Typically benthic diatoms were found in high abundance in the water column, and their biomass in the water was correlated with their biomass in the biofilm, indicating the benthic origin of these cells. Variations in river discharge and temperature drove the temporal distribution of benthic and pelagic communities: under high flow mixing (winter) communities showed the greatest similarity, and during low flow (summer)they differed the most. Even during low flow, typical benthic species were observed in the water column, indicating that benthic−pelagic exchanges were not exclusively due to high water flow. Moreover, during low flow periods, planktonic diatoms typically settled within biofilms, presumably because of higher water residence times, and/or upstream reservoir flushing

Relative impacts of morphological alteration to shorelines and eutrophication on littoral macroinvertebrates in Mediterranean lakes

Development of effective methods for assessing the ecological status of lakes based on littoral benthic fauna has been hampered by the lack of quantitative data on the relative impacts of key pressures on the benthic community. We used variance partitioning at 126 sites belonging to 14 natural Mediterranean lakes to analyze the pure and shared effects of eutrophication, morphological alterations, microhabitat type, lake morphometry and geographic position on the littoral macroinvertebrate community. The spatial arrangement of the sampling sites was responsible for 9.1% of the total variance in littoral benthic community composition, lake morphometry accounted for 4.3% of variation, and microhabitat type accounted for 3.9%. Communities appeared to be affected primarily by morphological alterations to lake shorelines, and their impact was 2.5 times as important as that of eutrophication. The structure of littoral benthic communities was governed by processes acting at several spatial scales from region to lake scale. Thus, several pressures and the various spatial scales at which these act should be taken into account when implementing methods of assessing lake ecological condition based on littoral benthic invertebrates. Region-specific methods for subalpine and volcanic lakes might enhance the validity of assessment of results of morphological alterations and improve management of those water resources

Will improving wastewater treatment impact shorebirds? Effects of sewage discharges on estuarine invertebrates and birds

Human communities often discharge wastewaters into estuaries, influencing their organic and pollutant loading, benthic community and trophic structure. The implementation of the Water Framework Directive has encouraged the treatment of wastewater discharges across European estuaries, but the implications for invertebrate and waterbird communities are poorly understood. We explore the effects of untreated sewage discharges on the distribution and abundance of foraging black-tailed godwits Limosa limosa and their main benthic prey (bivalves and polychaetes) on the Tejo estuary in Portugal, a major European Special Protection Area with ongoing wastewater improvements. Patches of mudflat in close proximity to sewage streams (70 m), and godwits foraging in these areas can attain the highest intake rates recorded for the estuary. However, high intake rates can also be attained on bivalve prey, and bivalve biomass and density increase slightly with distance from sewage streams. As the organic input from sewage outfalls influences invertebrate abundance and godwit foraging rates over relatively small areas, the ongoing implementation of a sewage treatment network on the Tejo estuary seems likely to have only a limited impact on the wintering godwit population. The localized effect of untreated sewage discharges on benthic communities suggests that the implications for predatory birds are relatively minor where alternative prey are available, but may be more severe in locations with more depauperate, polychaete-dominated invertebrate communities

Influence of coral and algal exudates on microbially mediated reef metabolism.

Benthic primary producers in tropical reef ecosystems can alter biogeochemical cycling and microbial processes in the surrounding seawater. In order to quantify these influences, we measured rates of photosynthesis, respiration, and dissolved organic carbon (DOC) exudate release by the dominant benthic primary producers (calcifying and non-calcifying macroalgae, turf-algae and corals) on reefs of Mo'orea French Polynesia. Subsequently, we examined planktonic and benthic microbial community response to these dissolved exudates by measuring bacterial growth rates and oxygen and DOC fluxes in dark and daylight incubation experiments. All benthic primary producers exuded significant quantities of DOC (roughly 10% of their daily fixed carbon) into the surrounding water over a diurnal cycle. The microbial community responses were dependent upon the source of the exudates and whether the inoculum of microbes included planktonic or planktonic plus benthic communities. The planktonic and benthic microbial communities in the unamended control treatments exhibited opposing influences on DO concentration where respiration dominated in treatments comprised solely of plankton and autotrophy dominated in treatments with benthic plus plankon microbial communities. Coral exudates (and associated inorganic nutrients) caused a shift towards a net autotrophic microbial metabolism by increasing the net production of oxygen by the benthic and decreasing the net consumption of oxygen by the planktonic microbial community. In contrast, the addition of algal exudates decreased the net primary production by the benthic communities and increased the net consumption of oxygen by the planktonic microbial community thereby resulting in a shift towards net heterotrophic community metabolism. When scaled up to the reef habitat, exudate-induced effects on microbial respiration did not outweigh the high oxygen production rates of benthic algae, such that reef areas dominated with benthic primary producers were always estimated to be net autotrophic. However, estimates of microbial consumption of DOC at the reef scale surpassed the DOC exudation rates suggesting net consumption of DOC at the reef-scale. In situ mesocosm experiments using custom-made benthic chambers placed over different types of benthic communities exhibited identical trends to those found in incubation experiments. Here we provide the first comprehensive dataset examining direct primary producer-induced, and indirect microbially mediated alterations of elemental cycling in both benthic and planktonic reef environments over diurnal cycles. Our results highlight the variability of the influence of different benthic primary producers on microbial metabolism in reef ecosystems and the potential implications for energy transfer to higher trophic levels during shifts from coral to algal dominance on reefs

The effect of land use on benthic communities in Hawkes Bay streams of differing geology : a thesis presented in partial fulfilment of the requirements for the degree of Master of Science in Ecology at Massey University

Benthic macroinvertebrate and periphyton communities of streams draining four different land use types within four distinct geological types were sampled between December 1996 and January 1997. Catchment land use comprised either standing mature or logged exotic forest, native forest, or hill country pasture. The geological types of these catchments were either Mesozoic sandstone-greywacke, Pleistocene-greywacke, Tertiary mudstone, or limestone in origin. Pastoral stream invertebrate community structure was significantly different from that found in forested streams, with no clear distinction separating communities from standing exotic, logged exotic, and native forest sites. Pastoral communities were dominated by dipterans and trichopterans. while in contrast, macroinvertebrate communities in streams draining sandstone-greywacke catchments were dominated by ephemeropterans and plecopterans, showing a clear influence of catchment geology on benthic macroinvertebrate communities. This sandstone-greywacke effect appeared to be independent of land use. Periphyton biomass was greatest in pastoral and exotic sites, particularly those draining limestone catchments. High nutrient and conductivity levels, both of which are characteristic of limestone streams, appeared to override the effect of light restrictions on periphyton growth in exotic forest sites. Overall, both geology and land use played major roles in determining the structure of stream benthic communities, with factors such as altitude and stream temperature also important influences on these communities. In November and December 1997, nutrient, shade, and disturbance effects were examined in periphyton communities colonising artificial substrates. These substrates were left in the 8 forested Hawkes Bay streams for 28 days with disturbance treatment substrates being physically abraded every 7 days. Nutrients (N + P) were added to nutrient treatment substrates and polythene cloth was used to create an artificially shaded environment for shade treatment substrates. Light availability and percentage canopy cover had the greatest effect upon periphyton, with light limitation being exhibited in closed canopy systems. Nutrient supply was also a factor determining periphyton biomass at both open and closed sites, although only up to a limit. Physical disturbance successfully removed organic matter from substrates as well as reducing chlorophyll a levels at open sites, however light and nutrient levels were more important determinants of chlorophyll a concentrations. In summary, both land use and geology play a considerable role in influencing both macroinvertebrate community structure and periphyton biomass. The geological influence was mediated through direct effects on nutrient inputs into the stream (as measured by conductivity), as well as by the indirect influence upon stream water temperatures. The influence of land use on benthic communities is predominantly as a result of shade levels created by vegetation types and enrichment levels derived from agriculturally influenced land. These results are of particular importance when comparing or analysing results from studies involving different land use types, particularly when these land uses cover a range of altitudes or are found in more than one geological type

Assessing the response of nematode communities to climate change-driven warming : a microcosm experiment

Biodiversity has diminished over the past decades with climate change being among the main responsible factors. One consequence of climate change is the increase in sea surface temperature, which, together with long exposure periods in intertidal areas, may exceed the tolerance level of benthic organisms. Benthic communities may suffer structural changes due to the loss of species or functional groups, putting ecological services at risk. In sandy beaches, free-living marine nematodes usually are the most abundant and diverse group of intertidal meiofauna, playing an important role in the benthic food web. While apparently many functionally similar nematode species co-exist temporally and spatially, experimental results on selected bacterivore species suggest no functional overlap, but rather an idiosyncratic contribution to ecosystem functioning. However, we hypothesize that functional redundancy is more likely to occur and observe when taking into account the entire diversity of natural assemblages. Therefore, we conducted a microcosm experiment with two natural communities drawn directly from their environment to assess their stress response to elevated temperature. The two communities differed in diversity (high [HD] vs. low [LD]) and environmental origin (harsh vs. moderate conditions). We assessed their stress resistance to the experimental treatment in terms of species and diversity changes, and their function in terms of abundance, individual and community biomass, and trophic diversity. According to the Insurance Hypothesis (IH), we hypothesized that the HD community would cope better with the stressful treatment due to the species functional overlap, whereas the LD community functioning would benefit from species better adapted to harsh conditions. Our results indicate no evidence of functional redundancy in the studied nematofaunal communities. The species loss was more prominent and size specific in the HD; large predators and omnivores were lost, which may have important consequences for the benthic food web.Yet, we found some evidence for alternative diversity–ecosystem functioning relationships such as the Rivets and the Idiosyncrasy Model

Let's Get to the Bottom of the Arctic!

In this lesson students investigate benthic communities in the deep Arctic Ocean to determine the factors that influence their compositions. As a result of this activity, students will be able to identify the three realms of the Arctic Ocean and describe the relationships between these realms. They will also be able to describe different species associations in a benthic community, infer probable feeding strategies used by benthic organisms, and relate these strategies to sediment characteristics. Students will also review the relationship between variety, relative abundance, and diversity of organisms. Educational levels: High school

Characterization of Navassa National Wildlife Refuge: A preliminary report for NF-06-05 (NOAA ship "Nancy Foster", April 18-30, 2006)

Navassa is a small, undeveloped island in the Windward Passage between Jamaica and Haiti. It was designated a National Wildlife Refuge under the jurisdiction of the U.S. Fish and Wildlife Service in 1999, but the remote location makes management and enforcement challenging, and the area is regularly fished by artisanal fishermen from Haiti. In April 2006, the NOAA Center for Coastal Fisheries and Habitat Research conducted a research cruise to Navassa. The cruise produced the first high-resolution multibeam bathymetry for the area, which will facilitate habitat mapping and assist in refuge management. A major emphasis of the cruise was to study the impact of Haitian fishing gear on benthic habitats and fish communities; however, in 10 days on station only one small boat was observed with five fishermen and seven traps. Fifteen monitoring stations were established to characterize fish and benthic communities along the deep (28-34 m) shelf, as these areas have been largely unstudied by previous cruises. The fish communities included numerous squirrelfishes, triggerfishes, and parrotfishes. Snappers and grouper were also present but no small individuals were observed. Similarly, conch surveys indicated the population was in low abundance and was heavily skewed towards adults. Analysis of the benthic photoquadrats is currently underway. Other cruise activities included installation of a temperature logger network, sample collection for stable isotope analyses to examine trophic structure, and drop camera surveys to ground-truth habitat maps and overhead imagery. (PDF contains 58 pages

An in situ instrument for planar O2 optode measurements at benthic interfaces

A new in situ instrument for two‐dimensional mapping of oxygen in coastal sediments is presented. The measuring principle is described, and potential mechanical disturbances, solute and particle smearing associated with the measurements, and calibration routines are evaluated. The first in situ measurements obtained in two different benthic communities are presented. In a shallow photosynthetic sediment (1 m of water depth), an extensive horizontal and temporal variation in the O2 distribution caused by benthic photosynthesis and irrigating fauna was resolved. Repetitive planar optode measurements performed along a transect in central Øresund, Denmark (17 m of water depth) revealed a positive correlation between the apparent O2 penetration depths (OP) measured with a lateral distance <5.0 mm, whereas OP measured with a larger horizontal distance (up to 50 m) were not correlated. Consequently, the OP varied in patches with a characteristic size of 5.0 mm. The instrument described is a powerful new tool for in situ characterization of spatiotemporal variations in O2 distributions within benthic communities. The instrument can be adapted for use at full ocean depths, e.g., on deep‐sea landers or remote operating vehicles

Biodiversity, community structure and function of biofilms in stream ecosystems

Multi-species, surface-attached biofilms often dominate microbial life in streams and rivers, where they contribute substantially to biogeochemical processes. The microbial diversity of natural biofilms is huge, and may have important implications for the functioning of aquatic environments and the ecosystem services they provide. Yet the causes and consequences of biofilm biodiversity remain insufficiently understood. This review aims to give an overview of current knowledge on the distribution of stream biofilm biodiversity, the mechanisms generating biodiversity patterns and the relationship between biofilm biodiversity and ecosystem functioning