77 research outputs found

    Automated microaneurysm detection algorithms applied to diabetic retinopathy retinal images

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    Diabetic retinopathy is the commonest cause of blindness in working age people. It is characterised and graded by the development of retinal microaneurysms, haemorrhages and exudates. The damage caused by diabetic retinopathy can be prevented if it is treated in its early stages. Therefore, automated early detection can limit the severity of the disease, improve the follow-up management of diabetic patients and assist ophthalmologists in investigating and treating the disease more efficiently. This review focuses on microaneurysm detection as the earliest clinically localised characteristic of diabetic retinopathy, a frequently observed complication in both Type 1 and Type 2 diabetes. Algorithms used for microaneurysm detection from retinal images are reviewed. A number of features used to extract microaneurysm are summarised. Furthermore, a comparative analysis of reported methods used to automatically detect microaneurysms is presented and discussed. The performance of methods and their complexity are also discussed

    Deep Learning-based Approach for the Semantic Segmentation of Bright Retinal Damage

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    Regular screening for the development of diabetic retinopathy is imperative for an early diagnosis and a timely treatment, thus preventing further progression of the disease. The conventional screening techniques based on manual observation by qualified physicians can be very time consuming and prone to error. In this paper, a novel automated screening model based on deep learning for the semantic segmentation of exudates in color fundus images is proposed with the implementation of an end-to-end convolutional neural network built upon UNet architecture. This encoder-decoder network is characterized by the combination of a contracting path and a symmetrical expansive path to obtain precise localization with the use of context information. The proposed method was validated on E-OPHTHA and DIARETDB1 public databases achieving promising results compared to current state-of-theart methods.This paper was supported by the European Union’s Horizon 2020 research and innovation programme under the Project GALAHAD [H2020-ICT2016-2017, 732613]. The work of Adri´an Colomer has been supported by the Spanish Government under a FPI Grant [BES-2014-067889]. We gratefully acknowledge the support of NVIDIA Corporation with the donation of the Titan Xp GPU used for this research.Silva, C.; Colomer, A.; Naranjo Ornedo, V. (2018). Deep Learning-based Approach for the Semantic Segmentation of Bright Retinal Damage. En Intelligent Data Engineering and Automated Learning – IDEAL 2018. Springer. 164-173. https://doi.org/10.1007/978-3-030-03493-1_18S164173World Health Organization: Diabetes fact sheet. Sci. Total Environ. 20, 1–88 (2011)Verma, L., Prakash, G., Tewari, H.K.: Diabetic retinopathy: time for action. No complacency please! Bull. World Health Organ. 80(5), 419–419 (2002)Sopharak, A.: Machine learning approach to automatic exudate detection in retinal images from diabetic patients. J. Mod. Opt. 57(2), 124–135 (2010)Imani, E., Pourreza, H.R.: A novel method for retinal exudate segmentation using signal separation algorithm. Comput. Methods Programs Biomed. 133, 195–205 (2016)Haloi, M., Dandapat, S., Sinha, R.: A Gaussian scale space approach for exudates detection, classification and severity prediction. arXiv preprint arXiv:1505.00737 (2015)Welfer, D., Scharcanski, J., Marinho, D.R.: A coarse-to-fine strategy for automatically detecting exudates in color eye fundus images. Comput. Med. Imaging Graph. 34(3), 228–235 (2010)Harangi, B., Hajdu, A.: Automatic exudate detection by fusing multiple active contours and regionwise classification. Comput. Biol. Med. 54, 156–171 (2014)Sopharak, A., Uyyanonvara, B., Barman, S.: Automatic exudate detection from non-dilated diabetic retinopathy retinal images using fuzzy C-means clustering. Sensors 9(3), 2148–2161 (2009)Havaei, M., Davy, A., Warde-Farley, D.: Brain tumor segmentation with deep neural networks. Med. Image Anal. 35, 18–31 (2017)Liskowski, P., Krawiec, K.: Segmenting retinal blood vessels with deep neural networks. IEEE Trans. Med. Imag. 35(11), 2369–2380 (2016)Pratt, H., Coenen, F., Broadbent, D.M., Harding, S.P.: Convolutional neural networks for diabetic retinopathy. Procedia Comput. Sci. 90, 200–205 (2016)Gulshan, V., Peng, L., Coram, M.: Development and validation of a deep learning algorithm for detection of diabetic retinopathy in retinal fundus photographs. JAMA 316(22), 2402–2410 (2016)Prentašić, P., Lončarić, S.: Detection of exudates in fundus photographs using deep neural networks and anatomical landmark detection fusion. Comput. Methods Programs Biomed. 137, 281–292 (2016)Ronneberger, O., Fischer, P., Brox, T.: U-Net: convolutional networks for biomedical image segmentation. In: Navab, N., Hornegger, J., Wells, W.M., Frangi, A.F. (eds.) MICCAI 2015. LNCS, vol. 9351, pp. 234–241. Springer, Cham (2015). https://doi.org/10.1007/978-3-319-24574-4_28Garcia-Garcia, A., Orts-Escolano, S., Oprea, S., Villena-Martinez, V., Garcia-Rodriguez, J.: A review on deep learning techniques applied to semantic segmentation, pp. 1–23. arXiv preprint arXiv:1704.06857 (2017)Deng, Z., Fan, H., Xie, F., Cui, Y., Liu, J.: Segmentation of dermoscopy images based on fully convolutional neural network. In: IEEE International Conference on Image Processing (ICIP 2017), pp. 1732–1736. IEEE (2017)Long, J., Shelhamer, E., Darrell, T.: Fully convolutional networks for semantic segmentation. In: Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, pp. 3431–3440. 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    Detection of microaneurysms in retinal images using an ensemble classifier

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    This paper introduces, and reports on the performance of, a novel combination of algorithms for automated microaneurysm (MA) detection in retinal images. The presence of MAs in retinal images is a pathognomonic sign of Diabetic Retinopathy (DR) which is one of the leading causes of blindness amongst the working age population. An extensive survey of the literature is presented and current techniques in the field are summarised. The proposed technique first detects an initial set of candidates using a Gaussian Matched Filter and then classifies this set to reduce the number of false positives. A Tree Ensemble classifier is used with a set of 70 features (the most commons features in the literature). A new set of 32 MA groundtruth images (with a total of 256 labelled MAs) based on images from the MESSIDOR dataset is introduced as a public dataset for benchmarking MA detection algorithms. We evaluate our algorithm on this dataset as well as another public dataset (DIARETDB1 v2.1) and compare it against the best available alternative. Results show that the proposed classifier is superior in terms of eliminating false positive MA detection from the initial set of candidates. The proposed method achieves an ROC score of 0.415 compared to 0.2636 achieved by the best available technique. Furthermore, results show that the classifier model maintains consistent performance across datasets, illustrating the generalisability of the classifier and that overfitting does not occur

    Genetic algorithm based feature selection combined with dual classification for the automated detection of proliferative diabetic retinopathy

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    Proliferative diabetic retinopathy (PDR) is a condition that carries a high risk of severe visual impairment. The hallmark of PDR is the growth of abnormal new vessels. In this paper, an automated method for the detection of new vessels from retinal images is presented. This method is based on a dual classification approach. Two vessel segmentation approaches are applied to create two separate binary vessel map which each hold vital information. Local morphology features are measured from each binary vessel map to produce two separate 4-D feature vectors. Independent classification is performed for each feature vector using a support vector machine (SVM) classifier. The system then combines these individual outcomes to produce a final decision. This is followed by the creation of additional features to generate 21-D feature vectors, which feed into a genetic algorithm based feature selection approach with the objective of finding feature subsets that improve the performance of the classification. Sensitivity and specificity results using a dataset of 60 images are 0.9138 and 0.9600, respectively, on a per patch basis and 1.000 and 0.975, respectively, on a per image basis

    Localization and segmentation of optic disc in retinal images using circular Hough transform and grow-cut algorithm

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    Automated retinal image analysis has been emerging as an important diagnostic tool for early detection of eye-related diseases such as glaucoma and diabetic retinopathy. In this paper, we have presented a robust methodology for optic disc detection and boundary segmentation, which can be seen as the preliminary step in the development of a computer-assisted diagnostic system for glaucoma in retinal images. The proposed method is based on morphological operations, the circular Hough transform and the grow-cut algorithm. The morphological operators are used to enhance the optic disc and remove the retinal vasculature and other pathologies. The optic disc center is approximated using the circular Hough transform, and the grow-cut algorithm is employed to precisely segment the optic disc boundary. The method is quantitatively evaluated on five publicly available retinal image databases DRIVE, DIARETDB1, CHASE_DB1, DRIONS-DB, Messidor and one local Shifa Hospital Database. The method achieves an optic disc detection success rate of 100% for these databases with the exception of 99.09% and 99.25% for the DRIONS-DB, Messidor, and ONHSD databases, respectively. The optic disc boundary detection achieved an average spatial overlap of 78.6%, 85.12%, 83.23%, 85.1%, 87.93%, 80.1%, and 86.1%, respectively, for these databases. This unique method has shown significant improvement over existing methods in terms of detection and boundary extraction of the optic disc
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