Photocurrent induced by a bicircular light drive in centrosymmetric systems

A bicircular light (BCL) consists of left and right circularly polarized lights with different frequencies, and draws a rose-like pattern with a rotational symmetry determined by the ratio of the two frequencies. Here we show that an application of a BCL to centrosymmetric systems allows a photocurrent generation through introduction of an effective polarity to the system. We derive formulas for the BCL-induced photocurrent from a standard perturbation theory, which is then applied to a simple 1D model and 3D Dirac/Weyl semimetals. A nonperturbative effect with strong light intensity is also discussed with the Floquet technique.Comment: 12 pages, 6 figure

Uniform Distribution On Pachinko

Pachinko is a japanese mechanical gambling game similar to pinball. Recently, Akitaya et al. proposed several mathematical models of Pachinko. A number of pins are spiked in a field. A ball drops from the top-side end of the playfield, and falls down. In the 50-50 model, if the ball hits a pin, it moves to the left or right of the pin with equal probability. An arrangement of pins generates a distribution of the drop probability over all columns. We consider the problem of generating uniform distributions. Akitaya et al. show that (1/2^{{a}})-uniform distribution is possible for {a} in {0,1,2,3,4} and conjectured that it is possible for any positive integer a. In this paper, we show that the conjecture is true by a constructive way

Speech organ contour extraction using real-time MRI and machine learning method

Chiba Institute of TechnologyChiba Institute of TechnologyChiba Institute of TechnologyChiba Institute of TechnologyKonan UniversityNational Institute for Japanese Language and LinguisticsNational Institute for Japanese Language and LinguisticsReal-time MRI can be used to obtain videos that describe articulatory movements during running speech. For detailed analysis based on a large number of video frames, it is necessary to extract the contours of speech organs, such as the tongue, semi-automatically. The present study attempted to extract the contours of speech organs from videos using a machine learning method. First, an expert operator manually extracted the contours from the frames of a video to build training data sets. The learning operators, or learners, then extracted the contours from each frame of the video. Finally, the errors representing the geometrical distance between the extracted contours and the ground truth, which were the contours excluded from the training data sets, were examined. The results showed that the contours extracted using machine learning were closer to the ground truth than the contours traced by other expert and non-expert operators. In addition, using the same learners, the contours were extracted from other naive videos obtained during different speech tasks of the same subject. As a result, the errors in those videos were similar to those in the video in which the learners were trained

HCHL expression in hairy roots of Beta vulgaris yields a high accumulation of p-hydroxybenzoic acid (pHBA) glucose ester, and linkage of pHBA into cell walls.

As part of a study to explore the potential for new or modified bio-product formation, Beta vulgaris (sugar beet) has been genetically modified to express in root-organ culture a bacterial gene of phenylpropanoid catabolism. The HCHL gene, encoding p-hydroxycinnamoyl-CoA hydratase/lyase, was introduced into B. vulgaris under the control of a CaMV 35S promoter, using Agrobacterium rhizogenes LBA 9402. Hairy root clones expressing the HCHL gene, together with non-expressing clones, were analysed and revealed that one expression-positive clone accumulated the glucose ester of p-hydroxybenzoic acid (pHBA) at about 14% on a dry weight basis. This is the best yield achieved in plant systems so far. Determination of cell-wall components liberated by alkaline hydrolysis confirmed that the ratio of pHBA to ferulic acid was considerably higher in the HCHL-expressing clones, whereas only ferulic acid was detected in a non-expressing clone. The change in cell-wall components also resulted in a decrease in tensile strength in the HCHL-expressing clones

DOCK2 is involved in the host genetics and biology of severe COVID-19

「コロナ制圧タスクフォース」COVID-19疾患感受性遺伝子DOCK2の重症化機序を解明 --アジア最大のバイオレポジトリーでCOVID-19の治療標的を発見--. 京都大学プレスリリース. 2022-08-10.Identifying the host genetic factors underlying severe COVID-19 is an emerging challenge. Here we conducted a genome-wide association study (GWAS) involving 2, 393 cases of COVID-19 in a cohort of Japanese individuals collected during the initial waves of the pandemic, with 3, 289 unaffected controls. We identified a variant on chromosome 5 at 5q35 (rs60200309-A), close to the dedicator of cytokinesis 2 gene (DOCK2), which was associated with severe COVID-19 in patients less than 65 years of age. This risk allele was prevalent in East Asian individuals but rare in Europeans, highlighting the value of genome-wide association studies in non-European populations. RNA-sequencing analysis of 473 bulk peripheral blood samples identified decreased expression of DOCK2 associated with the risk allele in these younger patients. DOCK2 expression was suppressed in patients with severe cases of COVID-19. Single-cell RNA-sequencing analysis (n = 61 individuals) identified cell-type-specific downregulation of DOCK2 and a COVID-19-specific decreasing effect of the risk allele on DOCK2 expression in non-classical monocytes. Immunohistochemistry of lung specimens from patients with severe COVID-19 pneumonia showed suppressed DOCK2 expression. Moreover, inhibition of DOCK2 function with CPYPP increased the severity of pneumonia in a Syrian hamster model of SARS-CoV-2 infection, characterized by weight loss, lung oedema, enhanced viral loads, impaired macrophage recruitment and dysregulated type I interferon responses. We conclude that DOCK2 has an important role in the host immune response to SARS-CoV-2 infection and the development of severe COVID-19, and could be further explored as a potential biomarker and/or therapeutic target

The whole blood transcriptional regulation landscape in 465 COVID-19 infected samples from Japan COVID-19 Task Force

「コロナ制圧タスクフォース」COVID-19患者由来の血液細胞における遺伝子発現の網羅的解析 --重症度に応じた遺伝子発現の変化には、ヒトゲノム配列の個人差が影響する--. 京都大学プレスリリース. 2022-08-23.Coronavirus disease 2019 (COVID-19) is a recently-emerged infectious disease that has caused millions of deaths, where comprehensive understanding of disease mechanisms is still unestablished. In particular, studies of gene expression dynamics and regulation landscape in COVID-19 infected individuals are limited. Here, we report on a thorough analysis of whole blood RNA-seq data from 465 genotyped samples from the Japan COVID-19 Task Force, including 359 severe and 106 non-severe COVID-19 cases. We discover 1169 putative causal expression quantitative trait loci (eQTLs) including 34 possible colocalizations with biobank fine-mapping results of hematopoietic traits in a Japanese population, 1549 putative causal splice QTLs (sQTLs; e.g. two independent sQTLs at TOR1AIP1), as well as biologically interpretable trans-eQTL examples (e.g., REST and STING1), all fine-mapped at single variant resolution. We perform differential gene expression analysis to elucidate 198 genes with increased expression in severe COVID-19 cases and enriched for innate immune-related functions. Finally, we evaluate the limited but non-zero effect of COVID-19 phenotype on eQTL discovery, and highlight the presence of COVID-19 severity-interaction eQTLs (ieQTLs; e.g., CLEC4C and MYBL2). Our study provides a comprehensive catalog of whole blood regulatory variants in Japanese, as well as a reference for transcriptional landscapes in response to COVID-19 infection

Laser trapping and picosecond time-resolved spectroscopy of water droplets in air : cavity-enhanced spontaneous emission of Ru(bpy)3Cl2

Whispering gallery mode (WGM) resonances were observed in the emission spectrum of Ru(bpy)3^[2+] (bpy = 2,2'-bipyridine) in a single laser-trapped water droplet levitated in air. The emission decay profiles of Ru(bpy)3^[2+] in the water droplets comprised fast and slow decay components. The emission lifetime of the slow decay component was independent of the diameter of the droplet, and corresponded to the value in a bulk aqueous solution. On the other hand, the emission lifetime of the fast decay component decreased with decreasing the droplet diameter, which could be ascribed to the cavity-enhanced spontaneous emission. The decrease in the emission lifetime of the fast decay component as a function of the droplet diameter was explained on the basis of cavity quantum electrodynamic (QED) effects. It was shown that the mode characteristic of WGM resonances and the enhancement factor of the radiative rate of Ru(bpy)3^[2+] were controlled by the size of the water droplet

Vapochromic Emission Observed for Amorphous Molecular Materials: Emitting Properties of N,N-Bis(9,9-dimethylfluoren-2-y1)-4-nitroaniline

The title compound, NO2-F2PA, exhibited solvatochromic emission, that is, the emission spectra of hexane and toluene were different from each other and the emission was quenched in THF, acetone, ethanol, and acetonitrile. In addition, the amorphous film of NO2-F2PA exhibited vapochromic emission. Reddish orange emission of the film at ambient atmosphere changed to yellowish green one upon exposure to hexane vapor and recovered to the original after drying. On the other hand, the emission of the film was quenched upon exposure to THF and ethanol vapors