Monitoring the changes of Lake Uluabat Ramsar site and its surroundings in the 1985-2021 period using RS and GIS methods

Ramsar sites are important ecosystems that are protected by international status, have great value in terms of biodiversity, and constitute a resource in terms of economic, cultural, scientific and recreational aspects. In this study, the change of Lake Uluabat Ramsar Site and its surroundings, between the years 1985-2021 has been observed. For this, Remote Sensing (RS) and Geographic Information Systems (GIS) methods were used. Vegetation change in the lake and its surroundings in 1985, 2000, 2015 and 2021 with Normalized Difference Vegetation Index (NDVI), and changes in water surfaces with the water indices Normalized Difference Water Index (NDWI) and Modified Normalized Difference Water Index (mNDWI) were analyzed by using Landsat multi-band satellite images (Landsat 5 TM, Landsat 7 ETM and Landsat 8 OLI/TIRS) as RS data. The resulting changes were monitored and the success of the indices in determining these areas and the relations of the indices with each other were questioned by Accuracy index, Kappa coefficent, and Correlation analyses. The results show 36-year long-term changes and reveal a 13.06% shrinkage of Uluabat Lake wetland and surrounding water areas with the highest kappa coefficients for mNDWI as 0.83, 0.90, 0.93, 0.97, respectively, over the years studied

Acoustic Tweezing Cytometry Induces Rapid Initiation of Human Embryonic Stem Cell Differentiation.

Mechanical forces play critical roles in influencing human embryonic stem cell (hESC) fate. However, it remains largely uncharacterized how local mechanical forces influence hESC behavior in vitro. Here, we used an ultrasound (US) technique, acoustic tweezing cytometry (ATC), to apply targeted cyclic subcellular forces to hESCs via integrin-bound microbubbles (MBs). We found that ATC-mediated cyclic forces applied for 30 min to hESCs near the edge of a colony induced immediate global responses throughout the colony, suggesting the importance of cell-cell connection in the mechanoresponsiveness of hESCs to ATC-applied forces. ATC application generated increased contractile force, enhanced calcium activity, as well as decreased expression of pluripotency transcription factors Oct4 and Nanog, leading to rapid initiation of hESC differentiation and characteristic epithelial-mesenchymal transition (EMT) events that depend on focal adhesion kinase (FAK) activation and cytoskeleton (CSK) tension. These results reveal a unique, rapid mechanoresponsiveness and community behavior of hESCs to integrin-targeted cyclic forces

Evaluation of Cathode Gas Composition and Temperature Influences on Alkaline Anion Exchange Membrane Fuel Cell (AAEMFC) Performance

The effects of different temperatures (55, 65, 75 and 85 °C) and cathode gas compositions (O2, synthetic air, air and 90% synthetic air+10% CO2) on alkaline anion exchange membrane fuel cell (AAEMFC) were evaluated. Membrane electrode assemblies (MEA) were fabricated using commercial anion exchange membrane (AEM) in OH- form and Pt catalyst. Polarization curves and voltage responses during constant current were performed in order to describe the influences of temperature and gas composition on the AAEMFC performance. The experimental results showed that the fuel cell performance increases with elevating temperatures for all applied gas compositions. Highest power density of 34.7 mW cm-2 was achieved for pure O2 as cathode feed. A decrease to 20.3 mW cm-2 was observed when cathode gas composition was changed to synthetic air due to reduction of the O2 partial pressure. The presence of CO2 in atmospheric air applied to the cathode stream caused a further drop of the maximum power density to 15.2 mW cm-2 driven by neutralization of OH- ions with CO2

The PDGFRα-laminin B1-keratin 19 cascade drives tumor progression at the invasive front of human hepatocellular carcinoma

Human hepatocellular carcinomas (HCCs) expressing the biliary/hepatic progenitor cell marker keratin 19 (K19) have been linked with a poor prognosis and exhibit an increase in platelet-derived growth factor receptor a (PDGFR alpha) and laminin beta 1 (LAMB1) expression. PDGFR alpha has been reported to induce de novo synthesis of LAMB1 protein in a Sjogren syndrome antigen B (La/SSB)-dependent manner in a murine metastasis model. However, the role of this cascade in human HCC remains unclear. This study focused on the functional role of the PDGFR alpha-La/SSB-LAMB1 pathway and its molecular link to K19 expression in human HCC. In surgical HCC specimens from a cohort of 136 patients, PDGFR alpha expression correlated with K19 expression, microvascular invasion and metastatic spread. In addition, PDGFR alpha expression in pre-operative needle biopsy specimens predicted poor overall survival during a 5-year follow-up period. Consecutive histological staining demonstrated that the signaling components of the PDGFR alpha-La/SSB-LAMB1 pathway were strongly expressed at the invasive front. K19-positive HCC cells displayed high levels of alpha 2 beta 1 integrin (ITG) receptor, both in vitro and in vivo. In vitro activation of PDGFR alpha signaling triggered the translocation of nuclear La/SSB into the cytoplasm, enhanced the protein synthesis of LAMB1 by activating its internal ribosome entry site, which in turn led to increased secretion of laminin-111. This effect was abrogated by the PDGFR alpha-specific inhibitor crenolanib. Importantly LAMB1 stimulated ITG-dependent focal adhesion kinase/Src proto-oncogene non-receptor tyrosine kinase signaling. It also promoted the ITG-specific downstream target Rho-associated coiled-coil containing protein kinase 2, induced K19 expression in an autocrine manner, invadopodia formation and cell invasion. Finally, we showed that the knockdown of LAMB1 or K19 in subcutaneous xenograft mouse models resulted in significant loss of cells invading the surrounding stromal tissue and reduced HepG2 colonization into lung and liver after tail vein injection. The PDGFR alpha-LAMB1 pathway supports tumor progression at the invasive front of human HCC through K19 expression

A real-time, scalable, fast and highly resource efficient decoder for a quantum computer

Quantum computers promise to solve computing problems that are currently intractable using traditional approaches. This can only be achieved if the noise inevitably present in quantum computers can be efficiently managed at scale. A key component in this process is a classical decoder, which diagnoses the errors occurring in the system. If the decoder does not operate fast enough, an exponential slowdown in the logical clock rate of the quantum computer occurs. Additionally, the decoder must be resource efficient to enable scaling to larger systems and potentially operate in cryogenic environments. Here we introduce the Collision Clustering decoder, which overcomes both challenges. We implement our decoder on both an FPGA and ASIC, the latter ultimately being necessary for any cost-effective scalable solution. We simulate a logical memory experiment on large instances of the leading quantum error correction scheme, the surface code, assuming a circuit-level noise model. The FPGA decoding frequency is above a megahertz, a stringent requirement on decoders needed for e.g. superconducting quantum computers. To decode an 881 qubit surface code it uses only $4.5\%$ of the available logical computation elements. The ASIC decoding frequency is also above a megahertz on a 1057 qubit surface code, and occupies 0.06 mm$^2$ area and consumes 8 mW of power. Our decoder is optimised to be both highly performant and resource efficient, while its implementation on hardware constitutes a viable path to practically realising fault-tolerant quantum computers.Comment: 11 pages, 4 figure

Evidence for Irradiation Triggered Nonuniform Defect Distribution In Multiharmonic Magnetic Susceptibility of Neutron Irradiated YBa2Cu3O7-x

Multiharmonic ac-magnetic susceptibility \ch11,\chi2,chi3, of neutron irradiated Li-doped YBa2Cu3O7-x has revealed a nonmonotonic dependence of all harmonics on the neutron fluence. The irradiation has a strongly depressive influence on the intergrain connection suggesting an increase of the effective thickness of the intergranular Josephson junction at aneutron fluence of 0.98x10$^{17}$ cm$_{-2}$. Less damaged are the intragrain properties. A spectacular enhancement of the superconducting intragranular properties reflected in the characteristics of all harmonics was observed at highest fluence \Phi = 9.98x10$^{17}$ cm$_{-2}$. We assume that this effect results from the development of a space inhomogeneous distribution with alternating defectless and defect rich regions.Comment: 24 pages, 9 figures, accepted to J. Supercon

Textiloma: a case of foreign body mimicking a spinal mass

Items such as cotton or gauze pads can be mistakenly left behind during operations. Such foreign materials (called textilomas or gossypibomas) cause foreign body reaction in the surrounding tissue. The complications caused by these foreign bodies are well known, but cases are rarely published because of medico-legal implications. Some textilomas cause infection or abscess formation in the early stage, whereas others remain clinically silent for many years. Here, we describe a case of textiloma in which the patient presented with low-back pain 4 years after lumbar discectomy. Imaging revealed an abcess-like mass in the lumbar epidural space

A Multifunctional Interlayer for Solution Processed High Performance Indium Oxide Transistors

International audienceMultiple functionality of tungsten polyoxometalate (POM) has been achieved applying it as interfacial layer for solution processed high performance In 2 O 3 thin film transistors, which results in overall improvement of device performance. This approach not only reduces off-current of the device by more than two orders of magnitude, but also leads to a threshold voltage reduction, as well as significantly enhances the mobility through facilitated charge injection from the electrode to the active layer. Such a mechanism has been elucidated through morphological and spectroscopic studies

Crystal structure, biochemical and cellular activities demonstrate separate functions of MTH1 and MTH2

Deregulated redox metabolism in cancer leads to oxidative damage to cellular components including deoxyribonucleoside triphosphates (dNTPs). Targeting dNTP pool sanitizing enzymes, such as MTH1, is a highly promising anticancer strategy. The MTH2 protein, known as NUDT15, is described as the second human homologue of bacterial MutT with 8-oxo-dGTPase activity. We present the first NUDT15 crystal structure and demonstrate that NUDT15 prefers other nucleotide substrates over 8-oxo-dGTP. Key structural features are identified that explain different substrate preferences for NUDT15 and MTH1. We find that depletion of NUDT15 has no effect on incorporation of 8-oxo-dGTP into DNA and does not impact cancer cell survival in cell lines tested. NUDT17 and NUDT18 were also profiled and found to have far less activity than MTH1 against oxidized nucleotides. We show that NUDT15 is not a biologically relevant 8-oxo-dGTPase, and that MTH1 is the most prominent sanitizer of the cellular dNTP pool known to date