Arrhenius temperature dependence of the crystallization time of deeply supercooled liquids

Usually, supercooled liquids and glasses are thermodynamically unstable against crystallization. Classical nucleation theory (CNT) has been used to describe the crystallization dynamics of supercooled liquids. However, recent studies on overcompressed hard spheres show that their crystallization dynamics are intermittent and mediated by avalanche-like rearrangements of particles, which largely differ from the CNT. These observations suggest that the crystallization times of deeply supercooled liquids or glasses cannot be described by the CNT, but this point has not yet been studied in detail. In this paper, we use molecular dynamics simulations to study the crystallization dynamics of soft spheres just after an instantaneous quench. We show that although the equilibrium relaxation time increases in a super-Arrhenius manner with decreasing temperature, the crystallization time shows an Arrhenius temperature dependence at very low temperatures. This is contrary to the conventional formula based on the CNT. Furthermore, the estimated energy barrier for the crystallization is surprisingly small compared to that for the equilibrium dynamics. By comparing the crystallization and aging dynamics quantitatively, we show that a coupling between aging and crystallization is the key for understanding the rapid crystallization of deeply supercooled liquids or glasses.Comment: 8 pages, 4 figure

Glucan dendrimer for carbohydrate drugs

Dendrimers are highly branched and star-shaped polymers with nanometer-scale dimensions. The nanostructured macromolecules are known for their defined structures, versatility in drug delivery, and high functional properties similar to biomoleclules. We developed a new way to synthesize glucan dendrimer like glycogen by using branching enzyme (EC 2.4.1.18) and glucan phosphorylase (EC 2.4.1.1) by using glucose-1-phosphate as a substrate. This way enables us to produce glucan dendrimers with strictly controlled molecular size and branching structure. In this context, we developed specific glycosylation technology to substitute glucose residues at non-reducing ends with galactose, mannose, glucosamine, glucuronic acid, or N-acetylglucosamine residues. Glucose dendrimers having glucosamine and/or glucuronic acid residues are successfully used for conjugation of other functional molecules. The nano-particle conjugated glucan dendrimers with peptide antigen and nucleotide adjuvant is a potential platform for vaccine. We investigated the glucan dendrimers function as a drug carrier. The uptake of several glucose dendrimers into antigen-presenting cells (APCs), such as dendritic cell and macrophage, were examined. Glucose dendrimers were incorporated into APCs, and introducing various sugar moieties into glucan dendrimers enhance the uptake them by APCs. When glucan dendrimer-peptide conjugates were added to the cultured APCs, the peptides were effectively presented on the surface of APCs. FITC-labeled glucan dendrimers injected subcutaneously in mice accumulated into inguinal lymph nodes, which play important role to introduce acquired immune respons

Enzymatic synthesis of glucan dendrimer for pharmaceutical applications

Bio-macromolecules (e.g. protein, peptide, antibody DNA or RNA) present in our bodies are now widely utilized in pharmaceuticals. Carbohydrates, on the other hand, have been receiving increasing attention as drug candidates, but the pharmaceutical usage of carbohydrates is limited to few glycosaminoglycans (e.g. heparin, hyaluronan or chondroitin sulfate), which are all endogenous polysaccharides. Glycogen is another polysaccharide present in our bodies as energy reserves, and its application for pharmaceuticals is not evident either. Glycogen is a highly branched polysaccharide of glucose with a very attractive structure and characteristics. It is a single molecular nano-sized spherical particle with dendritic architecture where numerous non-reducing ends constitute the surface of the molecule. Dendrimers and nano-sized particles have received interest as carriers for drug delivery system because such carriers can enhance the performance and efficacy of drug molecules. From this context, we consider glycogen as potentially a promising polysaccharide as drug carriers; therefore we are currently attempting to develop synthetic glucan dendrimers suitable for drug carriers. Such attempts have been scarce in the recent research of drug candidates. We have developed an enzymatic system to produce glucan dendrimer (GD) from sucrose by combined action of sucrose phosphorylase (EC: 2.4.1.7), glucan phosphorylase (EC: 2.4.1.1) and branching enzyme (EC: 2.4.1.18). This system enables us to produce GDs with strictly controlled molecular size (Mw/Mn value less than 1.1) and particle size ranging from 10 nm to 40 nm. Furthermore, we have developed non-reducing end specific glycosylation technology of GD by using glucan phosphorylase and its substrate analogs. Glucan phosphorylase from Aquifex aeolicus can use not only its original substrate, glucose 1-phosphate, but also other hexose 1-phosphates as substrate and transfer these hexoses moieties (glucuronic acid, glucosamine, N-acetyl glucosamine, galactose and mannose) to the non-reducing end of glucan. Using this enzymatic reaction, we can produce GDs whose surface is modified with these hexose residues. GDs having glucuronic acid and/or glucosamine residues are especially useful since they can be covalently conjugated with functional substances such as sugar chains, peptides, nucleotides and others. It is possible to control the conjugate ratio of the functional substance on the surface of GD. Surface engineered GD is a novel and versatile platform for carbohydrate drugs and drug carriers, and its application will be described

Congenital intrarenal arteriovenous malformation presenting with gross hematuria after endoscopic intervention: a case report

<p>Abstract</p> <p>Introduction</p> <p>Although diagnostic ureterorenoscopy is a minimally invasive and effective diagnostic procedure, it has the potential for significant postoperative complications. We report the first case in the literature of intrarenal arteriovenous fistulas causing hemodynamic effective anemia 4 days after ureterorenoscopic biopsy.</p> <p>Case presentation</p> <p>A 63-year-old Caucasian woman presented with hemodynamic effective macrohematuria (hemoglobin 70 g/liter) 4 days after ureterorenoscopy and biopsy of the upper pole collecting system due to recurrent microhematuria. Duplex-sonography and computed tomography angiography revealed multiple arteriovenous fistulas and erosions into the calyceal system. Intra-arterial digital subtraction angiography confirmed this condition. After superselective embolization of the arteriovenous fistulas, the patient had no further episodes of bleeding or microhematuria.</p> <p>Conclusion</p> <p>If malignancies, urolithiasis or urinary tract infections are ruled out by common diagnostic procedures as the cause of recurrent minor or gross hematuria, the possibility of arteriovenous fistulas should be included in the differential diagnosis and Duplex-Sonography or the more invasive selective renal arteriography should be performed as this is the most definitive method for diagnosing arteriovenous fistula.</p

Structural Enzymology of Cellvibrio japonicus Agd31B Protein Reveals α-Transglucosylase Activity in Glycoside Hydrolase Family 31

The metabolism of the storage polysaccharides glycogen and starch is of vital importance to organisms from all domains of life. In bacteria, utilization of these -glucans requires the concerted action of a variety of enzymes, including glycoside hydrolases, glycoside phosphorylases, and transglycosylases. In particular, transglycosylases from glycoside hydrolase family 13 (GH13) and GH77 play well established roles in -glucan side chain (de)branching, regulation of oligo- and polysaccharide chain length, and formation of cyclic dextrans. Here, we present the biochemical and tertiary structural characterization of a new type of bacterial 1,4- -glucan 4- -glucosyltransferase from GH31. Distinct from 1,4- -glucan 6- -glucosyltransferases (EC 2.4.1.24) and 4- -glucanotransferases (EC 2.4.1.25), this enzyme strictly transferred one glucosyl residue from (134)- glucans in disproportionation reactions. Substrate hydrolysis was undetectable for a series of malto-oligosaccharides except maltose for which transglycosylation nonetheless dominated across a range of substrate concentrations. Crystallographic analysis of the enzyme in free, acarbose-complexed, and trapped 5-fluoro--glucosyl-enzyme intermediate forms revealed extended substrate interactions across one negative and up to three positive subsites, thus providing structural rationalization for the unique, single monosaccharide transferase activity of the enzyme

Interferon-β gene transfer induces a strong cytotoxic bystander effect on melanoma cells

A local gene therapy scheme for the delivery of type I interferons could be an alternative for the treatment of melanoma. We evaluated the cytotoxic effects of interferon-β (IFNβ) gene lipofection on tumor cell lines derived from three human cutaneous and four canine mucosal melanomas. The cytotoxicity of human IFNβ gene lipofection resulted higher or equivalent to that of the corresponding addition of the recombinant protein (rhIFNβ) to human cells. IFNβ gene lipofection was not cytotoxic for only one canine melanoma cell line. When cultured as monolayers, three human and three canine IFNβ-lipofected melanoma cell lines displayed a remarkable bystander effect. As spheroids, the same six cell lines were sensitive to IFNβ gene transfer, two displaying a significant multicell resistance phenotype.The effects of conditioned IFNβ-lipofected canine melanoma cell culture media suggested the release of at least one soluble thermolabile cytotoxic factor that could not be detected in human melanoma cells. By using a secretion signal-free truncated human IFNβ, we showed that its intracellular expression was enough to induce cytotoxicity in two human melanoma cell lines. The lower cytoplasmatic levels of reactive oxygen species detected after intracellular IFNβ expression could be related to the resistance displayed by one human melanoma cell line. As IFNβ gene transfer was effective against most of the assayed melanomas in a way not limited by relatively low lipofection efficiencies, the clinical potential of this approach is strongly supported.Fil: Rossi, Ursula Amaranta. Universidad de Buenos Aires. Facultad de Medicina. Instituto de Oncología ; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Gil Cardeza, Maria Lourdes. Universidad de Buenos Aires. Facultad de Medicina. Instituto de Oncología ; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Villaverde, Marcela Solange. Universidad de Buenos Aires. Facultad de Medicina. Instituto de Oncología ; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Finocchiaro, Liliana Maria Elena. Universidad de Buenos Aires. Facultad de Medicina. Instituto de Oncología ; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Glikin, Gerardo Claudio. Universidad de Buenos Aires. Facultad de Medicina. Instituto de Oncología ; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentin

Gross hematuria caused by a congenital intrarenal arteriovenous malformation: a case report

<p>Abstract</p> <p>Introduction</p> <p>We report the case of a woman who presented with gross hematuria and was treated with a percutaneous embolization.</p> <p>Case presentation</p> <p>A 48-year-old Caucasian woman presented with gross hematuria, left flank pain, and clot retention. The patient had no history of renal trauma, hypertension, urolithiasis, or recent medical intervention with percutaneous instrumentation. The patient did not report any bleeding disorder and was not taking any medication. Her systolic and diastolic blood pressure values were normal at presentation. The patient had anemia (8 mg/dL) and tachycardia (110 bpm). She underwent color and spectral Doppler sonography, multi-slice computed tomography, and angiography of the kidneys, which showed a renal arteriovenous malformation pole on top of the left kidney.</p> <p>Conclusions</p> <p>The feeding artery of the arteriovenous malformation was selectively embolized with a microcatheter introduced using a right transfemoral approach. By using this technique, we stopped the bleeding, preserved renal parenchymal function, and relieved the patient's symptoms. The hemodynamic effects associated with the abnormality were also corrected.</p

Knockdown of MBP-1 in Human Foreskin Fibroblasts Induces p53-p21 Dependent Senescence

MBP-1 acts as a general transcriptional repressor. Overexpression of MBP-1 induces cell death in a number of cancer cells and regresses tumor growth. However, the function of endogenous MBP-1 in normal cell growth regulation remains unknown. To unravel the role of endogenous MBP-1, we knocked down MBP-1 expression in primary human foreskin fibroblasts (HFF) by RNA interference. Knockdown of MBP-1 in HFF (HFF-MBPsi-4) resulted in an induction of premature senescence, displayed flattened cell morphology, and increased senescence-associated beta-galactosidase activity. FACS analysis of HFF-MBPsi-4 revealed accumulation of a high number of cells in the G1-phase. A significant upregulation of cyclin D1 and reduction of cyclin A was detected in HFF-MBPsi-4 as compared to control HFF. Senescent fibroblasts exhibited enhanced expression of phosphorylated and acetylated p53, and cyclin-dependent kinase inhibitor, p21. Further analysis suggested that promyolocytic leukemia protein (PML) bodies are dramatically increased in HFF-MBPsi-4. Together, these results demonstrated that knockdown of endogenous MBP-1 is involved in cellular senescence of HFF through p53-p21 pathway

Cellular senescence and chromatin organisation

Despite the potential importance of senescence in tumour suppression, its effector mechanism is poorly understood. Recent studies suggest that alterations in the chromatin environment might add an additional layer of stability to the phenotype. In this review, recent discoveries on the interplay between senescence and chromatin biology are overviewed

HMGA1 Induces Intestinal Polyposis in Transgenic Mice and Drives Tumor Progression and Stem Cell Properties in Colon Cancer Cells

Although metastatic colon cancer is a leading cause of cancer death worldwide, the molecular mechanisms that enable colon cancer cells to metastasize remain unclear. Emerging evidence suggests that metastatic cells develop by usurping transcriptional networks from embryonic stem (ES) cells to facilitate an epithelial-mesenchymal transition (EMT), invasion, and metastatic progression. Previous studies identified HMGA1 as a key transcription factor enriched in ES cells, colon cancer, and other aggressive tumors, although its role in these settings is poorly understood.To determine how HMGA1 functions in metastatic colon cancer, we manipulated HMGA1 expression in transgenic mice and colon cancer cells. We discovered that HMGA1 drives proliferative changes, aberrant crypt formation, and intestinal polyposis in transgenic mice. In colon cancer cell lines from poorly differentiated, metastatic tumors, knock-down of HMGA1 blocks anchorage-independent cell growth, migration, invasion, xenograft tumorigenesis and three-dimensional colonosphere formation. Inhibiting HMGA1 expression blocks tumorigenesis at limiting dilutions, consistent with depletion of tumor-initiator cells in the knock-down cells. Knock-down of HMGA1 also inhibits metastatic progression to the liver in vivo. In metastatic colon cancer cells, HMGA1 induces expression of Twist1, a gene involved in embryogenesis, EMT, and tumor progression, while HMGA1 represses E-cadherin, a gene that is down-regulated during EMT and metastatic progression. In addition, HMGA1 is among the most enriched genes in colon cancer compared to normal mucosa.Our findings demonstrate for the first time that HMGA1 drives proliferative changes and polyp formation in the intestines of transgenic mice and induces metastatic progression and stem-like properties in colon cancer cells. These findings indicate that HMGA1 is a key regulator, both in metastatic progression and in the maintenance of a stem-like state. Our results also suggest that HMGA1 or downstream pathways could be rational therapeutic targets in metastatic, poorly differentiated colon cancer