Coral community data Heron Island Great Barrier Reef 1962–2016

Here we describe benthic composition data derived from benthic photoquadrats collected over 41 surveys between 1962 and 2016 at four sites on Heron reef, at the southern end of Australia’s Great Barrier Reef, to assess change in coral composition over time. Surveys have often been annual, in a few years sub-annual, and the longest gap is six years. A subset of the data from two sites with the most complete records has been fully processed to allow the size of all individual colonies, and changes in species composition and cover, to be tracked over time. The taxonomy in these quadrats has been carefully checked for internal consistency, and is generally at the species level. A second subset has been processed, but has not been through full quality control, while a third subset exists as images only. This is the longest, 56 years, regular photographic record of coral cover in existence, and provides a valuable temporal contrast dating back in time to more recent studies of greater geographic extent and/or resolution.Jason E. Tanner, Joseph H. Connel

A controlled aquarium system and approach to study the role of sponge-bacteria interactions using Aplysilla rosea and Vibrio natriegens

Sponge-bacteria interactions are very important due to their ecological and biological significance. To understand the impact of interactions between sponges and bacteria (both associated with and external to sponges) on sponge-associated microbial diversity, sponge metabolite profiles and bioactivity, we used a controlled aquarium system and designed an experimental approach that allows the study of sponge-bacteria interactions in a well-defined manner. To test the feasibility of this approach, this system was used to study the interaction between a sponge Aplysilla rosea and a marine bacterium commonly found in seawater, Vibrio natriegens. Sponge explants were exposed to V. natriegens, at 5 × 106 cfu/ml, and changes were monitored for 48 hours. Pyro-sequencing revealed significant shifts in microbial communities associated with the sponges after 24 to 48 hours. Both the control (sponge only without added bacteria) and Vibrio-exposed sponges showed a distinct shift in bacterial diversity and abundance with time. Vibrio exposure significantly increased bacterial diversity, the abundance of a number of taxa compared to control sponges. The result experimentally supports the notion of dynamic and concerted responses by the sponge when interacting with a bacterium, and demonstrates the feasibility of using this controlled aquarium system for the study of sponge-bacteria interactions.Mohammad F. Mehbub, Jason E. Tanner, Stephen J. Barnett, Jan Bekker, Christopher M. M. Franco and Wei Zhan

Sum rules and energy scales in the high-temperature superconductor YBa2Cu3O6+x

The Ferrell-Glover-Tinkham (FGT) sum rule has been applied to the temperature dependence of the in-plane optical conductivity of optimally-doped YBa_2Cu_3O_{6.95} and underdoped YBa_2Cu_3O_{6.60}. Within the accuracy of the experiment, the sum rule is obeyed in both materials. However, the energy scale \omega_c required to recover the full strength of the superfluid \rho_s in the two materials is dramatically different; \omega_c \simeq 800 cm^{-1} in the optimally doped system (close to twice the maximum of the superconducting gap, 2\Delta_0), but \omega_c \gtrsim 5000 cm^{-1} in the underdoped system. In both materials, the normal-state scattering rate close to the critical temperature is small, \Gamma < 2\Delta_0, so that the materials are not in the dirty limit and the relevant energy scale for \rho_s in a BCS material should be twice the energy gap. The FGT sum rule in the optimally-doped material suggests that the majority of the spectral weight of the condensate comes from energies below 2\Delta_0, which is consistent with a BCS material in which the condensate originates from a Fermi liquid normal state. In the underdoped material the larger energy scale may be a result of the non-Fermi liquid nature of the normal state. The dramatically different energy scales suggest that the nature of the normal state creates specific conditions for observing the different aspects of what is presumably a central mechanism for superconductivity in these materials.Comment: RevTeX 4 file, 9 pages with 7 embedded eps figure

Dynamics of liquid He-4 in confined geometries from Time-Dependent Density Functional calculations

We present numerical results obtained from Time-Dependent Density Functional calculations of the dynamics of liquid He-4 in different environments characterized by geometrical confinement. The time-dependent density profile and velocity field of He-4 are obtained by means of direct numerical integration of the non-linear Schrodinger equation associated with a phenomenological energy functional which describes accurately both the static and dynamic properties of bulk liquid He-4. Our implementation allows for a general solution in 3-D (i.e. no symmetries are assumed in order to simplify the calculations). We apply our method to study the real-time dynamics of pure and alkali-doped clusters, of a monolayer film on a weakly attractive surface and a nano-droplet spreading on a solid surface.Comment: q 1 tex file + 9 Ps figure

Enhanced pressure drop, planar contraction flows and continuous spectrum models

This study addresses a rheological problem that has been outstanding now for the past few decades, raised by the experimental findings of Binding and Walters [1]. There, it was established experimentally that planar contraction flows for some Boger fluids could display enhanced pressure-drops above Newtonian flows, as was the case for their tubular counterparts. Nevertheless, flow-structures to achieve this result were reported to be markedly different, planar to circular. In this article, it is shown how predictive differential-viscoelastic solutions with continuum models can replicate these observations. Key to this success has been the derivation of a new definition for the third-invariant of the rate-of-deformation tensor in planar flows, mimicking that of the circular case [2], [3]. This provides a mechanism to successfully incorporate dissipation within planar flows, as performed earlier for tubular flows. Still, to reach the necessary large deformation-rates to achieve planar enhanced pressure-drops, and whilst maintaining steady flow-conditions, it has been found crucial to invoke a continuous-spectrum relaxation-time model [3]. The rheological power and flexibility of such a model is clearly demonstrated, over its counterpart Maxwellian single-averaged relaxation-time approximation; the latter transcending the boundaries of steady-to-unsteady flow to manifest equivalent levels of enhanced pressure-drops. Then, the role of extensional viscosity and first normal-stress difference, each play their part to achieve such planar enhanced pressure-drops. As a by-product, the distinctive planar ‘bulb-flow’ structures discovered by Binding and Walters [1], absent in tubular flows, are also predicted under the associated regime of high deformation-rates where enhanced pressure-drop arise

Detector Description and Performance for the First Coincidence Observations between LIGO and GEO

For 17 days in August and September 2002, the LIGO and GEO interferometer gravitational wave detectors were operated in coincidence to produce their first data for scientific analysis. Although the detectors were still far from their design sensitivity levels, the data can be used to place better upper limits on the flux of gravitational waves incident on the earth than previous direct measurements. This paper describes the instruments and the data in some detail, as a companion to analysis papers based on the first data.Comment: 41 pages, 9 figures 17 Sept 03: author list amended, minor editorial change

Bounding CPT Violation in the Neutral-B System

The feasibility of placing bounds on CPT violation from experiments with neutral-$B$ mesons is examined. We consider situations with uncorrelated mesons and ones with either unboosted or boosted correlated mesons. Analytical expressions valid for small T- and CPT-violating parameters are presented for time-dependent and time-integrated decay rates, and various relevant asymmetries are derived. We use Monte-Carlo simulations to model experimental conditions for a plausible range of CPT-violating parameters. The treatment uses realistic data incorporating background effects, resolutions, and acceptances for typical detectors at LEP, CESR, and the future $B$ factories. Presently, there are no bounds on CPT violation in the $B$ system. We demonstrate that limits of order 10\% on CPT violation can be obtained from data already extant, and we determine the CPT reach attainable within the next few years.Comment: accepted for publication in Physical Review

The Sudbury Neutrino Observatory

The Sudbury Neutrino Observatory is a second generation water Cherenkov detector designed to determine whether the currently observed solar neutrino deficit is a result of neutrino oscillations. The detector is unique in its use of D2O as a detection medium, permitting it to make a solar model-independent test of the neutrino oscillation hypothesis by comparison of the charged- and neutral-current interaction rates. In this paper the physical properties, construction, and preliminary operation of the Sudbury Neutrino Observatory are described. Data and predicted operating parameters are provided whenever possible.Comment: 58 pages, 12 figures, submitted to Nucl. Inst. Meth. Uses elsart and epsf style files. For additional information about SNO see http://www.sno.phy.queensu.ca . This version has some new reference