Spatial patterns of plankton biomass and stable isotopes reflect the influence of the nitrogen-fixer Trichodesmium along the subtropical North Atlantic.

proyecto Malaspina-2010 (CSD2008-00077) del programa CONSOLIDER-INGENIO 2010, Ministerio de Ciencia e Innovación y proyecto EURO-BASIN (FP7-ENV-2010 264933) e Instituto Español de Oceanografia (IEO). C.M. recibió un contrato PFPI del IEO.The spatial variability of biomass and stable isotopes in plankton size fractions in the upper 200 m was studied in a high spatial resolution transect along 24°N from the Canary Islands to Florida to determine nitrogen and carbon sources. Vertical advection of waters predominated in lateral zones, while the central Atlantic (30–70°W) was characterized by strong stratification and oligotrophic surface waters. Plankton biomass was low in the central zone and high on both the eastern and the western sides, with most of the variability due to either large (>2000 µm) or small plankton (50% of organic nitrogen in the central zone, and even >30% in the eastern and the western zones. The impact of diazotrophy increased with the size of the organisms, supporting the wide participation of all trophic levels in the processing of recently fixed nitrogen. These results indicate that atmospheric sources of carbon and nitrogen prevail over deep water sources in the subtropical North Atlantic and that the zone influenced by diazotrophy is much larger than reported in previous studies.CONSOLIDER-INGENIO, 7FPPreprint1,749

Iron Deficiency Increases Growth and Nitrogen-Fixation Rates of Phosphorus-Deficient Marine Cyanobacteria

Marine dinitrogen (N2)-fixing cyanobacteria have large impacts on global biogeochemistry as they fix carbon dioxide (CO2) and fertilize oligotrophic ocean waters with new nitrogen. Iron (Fe) and phosphorus (P) are the two most important limiting nutrients for marine biological N2 fixation, and their availabilities vary between major ocean basins and regions. A long-standing question concerns the ability of two globally dominant N2-fixing cyanobacteria, unicellular Crocosphaera and filamentous Trichodesmium, to maintain relatively high N2-fixation rates in these regimes where both Fe and P are typically scarce. We show that under P-deficient conditions, cultures of these two cyanobacteria are able to grow and fix N2 faster when Fe deficient than when Fe replete. In addition, growth affinities relative to P increase while minimum concentrations of P that support growth decrease at low Fe concentrations. In Crocosphaera, this effect is accompanied by a reduction in cell sizes and elemental quotas. Relatively high growth rates of these two biogeochemically critical cyanobacteria in low-P, low-Fe environments such as those that characterize much of the oligotrophic ocean challenge the common assumption that low Fe levels can have only negative effects on marine primary producers. The closely interdependent influence of Fe and P on N2-fixing cyanobacteria suggests that even subtle shifts in their supply ratio in the past, present and future oceans could have large consequences for global carbon and nitrogen cycles

Numerical investigation of cyclic variations in gasoline engines using a hybrid URANS/LES modeling approach

Cycle to cycle variations are an important aspect in the development and optimization process of internal combustion engines. In this study the feasibility of using a detached eddy simulation (DES) SST model, which is a hybrid URANS/LES model, to predict cycle to cycle variations is investigated. In the near wall region or in regions where the grid resolution is not sufficiently fine to resolve smaller structures, the two-equation RANS shear-stress transport (SST) model is used. In the other regions with higher grid resolution an LES model is applied. First, the numerical requirements associated with the hybrid URANS/LES and the employed solver are studied in detail. The numerical dissipation of the spatial scheme and the choice of the temporal scheme including the step size are evaluated. In addition, the accuracy of the solver for moving meshes, which are required for engine calculations, is assessed. The modeling constant linking the grid size to the DES filter length scale is determined by calculating a decaying homogeneous isotropic turbulence test case for different grid resolutions. The final applications of the model are two different engine cases with increasing complexity. The first case is the statistically stationary flow through an engine intake port. The time resolved flow structure predicted by the DES SST model is analyzed and the resulting time-averaged velocity fields are compared to experimental data at different locations. The second application is a motored multi-cycle simulation of a series production engine. The instantaneous flow development during the intake and compression stroke of one single cycle is studied and the ensemble-averaged and the instantaneous velocity fields as well as the resolved velocity fluctuations are compared to optical measurements. Special emphasis is placed on the cyclic differences of the velocity fluctuations at the time of ignition in the vicinity of the spark plug and the expected influence on the combustion process. 2009 Elsevier Ltd. All rights reserved

Detached eddy simulation of cyclic large scale fluctuations in a simplified engine setup

Computational Fluid Dynamics using RANS-based modelling approaches have become an important tool in the internal combustion engine development and optimization process. However, these models cannot resolve cycle to cycle variations, which are an important aspect in the design of new combustion systems. In this study the feasibility of using a Detached Eddy Simulation (DES) SST model, which is a hybrid RANS/LES model, to predict cycle to cycle variations is investigated. In the near wall region or in regions where the grid resolution is not sufficiently fine to resolve smaller structures, the two-equation RANS SST model is used. In the other regions with higher grid resolution an LES model is applied. The case considered is a geometrically simplified engine, for which detailed experimental data for the ensemble averaged and single cycle velocity field are available from Boree et al. Boree, J., Maurel, S., Bazile, R., 2002. Disruption of a compressed vortex, Physics of Fluids 14 (7), 2543-2556. The fluid flow shows a strong tumbling motion, which is a major characteristic for modern turbo-charged, direct-injection gasoline engines. The general flow structure is analyzed first and the extent of the LES region and the amount of resolved fluctuations are discussed. Multiple consecutive cycles are computed and turbulent statistics of DES SST, URANS and the measured velocity field are compared for different piston positions. Cycle to cycle variations of the velocity field are analyzed for both computation and experiment with a special emphasis on the useability of the DES SST model to predict cyclic variations. 2008 Elsevier Inc. All rights reserved

Hybrid URANS/LES turbulence simulation of vortex shedding behind a triangular flameholder

In this study a detached eddy simulation (DES) model, which belongs to the group of hybrid URANS/LES turbulence models, is used for the simulation of vortex shedding behind a triangular obstacle. In the near wall region or in regions where the grid resolution is not sufficiently fine to resolve smaller structures, the two-equation RANS shear-stress transport (SST) model is used. In the other regions with higher grid resolution a LES model, which uses a transport equation for the turbulent subgrid energy, is applied. The DES model is first investigated for two standard test cases, namely decaying homogeneous isotropic turbulence and the backward facing step, respectively. For the decaying homogeneous isotropic turbulence test case the evolution of the energy spectra in wavenumber space for different times are studied for both the DES and a Smagorinsky type LES model. Different grid resolutions are analyzed with a special emphasis on the modeling constant connecting the filter length scale to the grid size. The results are compared to experimental data. The backward facing step test case is used to study the model behavior for a case with a transition region between a RANS modeling approach close to the wall and LES based modeling in the intense shear flow region. The final application is the simulation of the vortex shedding behind a triangular obstacle. First, the influence of the inlet condition formulation is studied in detail as they can have a significant influence especially for LES based models. Detailed comparisons between simulation and experiment for the flow structure past the obstacle and statistical quantities such as the shedding frequency are shown. Finally the additional temporal and spatial information provided by the DES model is used to show the predicted anisotropy of turbulence. 2008 Springer Science+Business Media B.V

Multiscale approach to characterize mechanical properties of tissue engineered skin

International audienceTissue engineered skin usually consist of a multi-layered visco-elastic material composed of a fibrillar matrix and cells. The complete mechanical characterization of these tissues has not yet been accomplished. The purpose of this study was to develop a multiscale approach to perform this characterization in order to link the development process of a cultured skin to the mechanical properties. As a proof-of-concept, tissue engineered skin samples were characterized at different stages of manufacturing (acellular matrix, reconstructed dermis and reconstructed skin) for two different aging models (using cells from an 18- and a 61-year-old man). To assess structural variations, bi-photonic confocal microscopy was used. To characterize mechanical properties at a macroscopic scale, a light-load micro-mechanical device that performs indentation and relaxation tests was designed. Finally, images of the internal network of the samples under stretching were acquired by combining confocal microscopy with a tensile device. Mechanical properties at microscopic scale were assessed. Results revealed that adding cells during manufacturing induced structural changes, which provided higher elastic modulus and viscosity. Moreover, senescence models exhibited lower elastic modulus and viscosity. This multiscale approach was efficient to characterize and compare skin equivalent samples and permitted the first experimental assessment of the Poisson’s ratio for such tissues

Characterization of the mechanical properties of a dermal equivalent compared with human skin in vivo by indentation and static friction tests

International audienceThe study of changes in skin structure with age is becoming all the more important with the increase in life. The atrophy that occurs during aging is accompanied by more profound changes, with a loss of organization within the elastic collagen network and alterations in the basal elements. The aim of this study is to present a method to determine the mechanical properties of total human skin in vivo compared with dermal equivalents (DEs) using indentation and static friction tests

Multibiomarker assessment of the long term effects of dissolved and nanoparticulate silver (nAg) on zebra mussels: influence of feeding

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Integrated molecular approach in C. fluminea exposed to nCeO 2 : a mesocosm study

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