zoolog R package: Zooarchaeological analysis with log-ratios

Log Size Indexes (LSI) allow the increase of the number of data and have been used in a number of zooarchaeological studies since 1950. However, some standards to calculate the log ratios remain unpublished, the calculation of the indexes can be tedious, and it is further hindered by the diversity of data recording practices. The R package ‘zoolog’ enables calculation of thousands of log-ratios in seconds, with the advantage that the users can choose between different public references, which increases the repeatability and comparability of the results, allowing the smooth integration of references and databases with heterogeneous nomenclatures. Alternatively, the users may use their own references. This paper presents the main functionalities and procedures enabled by the package ‘zoolog’, together with some examples of use. A real dataset and several examples with R code are provided with the aim of facilitating osteometrical analyses in zooarchaeology.This work was developed as part of the ERC-Starting Grant ZooMWest (Grant agreement 716298)

Dental anomalies inside the cleft region in individuals with nonsyndromic cleft lip with or without cleft palate

Background: Individuals with nonsyndromic cleft lip with or without cleft palate (NSCL±P) present high frequency of dental anomalies, which may represent complicating factors for dental treatment. The aim of this study was to investigate the prevalence of dental anomalies inside cleft area in a group of Brazilians with NSCL±P. Material and Methods: Retrospective analysis of 178 panoramic radiographs of patients aged from 12 to 45 years old and without history of tooth extraction or orthodontic treatment was performed. Association between cleft type and the prevalence of dental anomalies was assessed by chi-square test with a significance level set at p≤ 0.05. Results: Dental anomalies were found in 88.2% (n=157) of the patients. Tooth agenesis (47.1%), giroversion (20%) and microdontia (15.5%) were the most common anomalies. Individuals with unilateral complete cleft lip and palate (CLP, p<0.0001), bilateral complete CLP (p=0.0002) and bilateral incomplete CLP (p< 0.0001) were more affected by tooth agenesis than individuals with other cleft types. The maxillary lateral incisors were the most affected teeth (p<0.0001). Conclusions: The present study revealed a high frequency of dental anomalies inside cleft region in NSCL±P patients, and further demonstrated that patients with unilateral complete CLP and bilateral incomplete CLP were frequently more affected by dental anomalies. Moreover, our results demonstrate that dental anomalies should be considered during dental treatment planning of individuals affected by NSCL±P

Living Benthic Foraminifera from the Surface and Subsurface Sediment Layers Applied to the Environmental Characterization of the Brazilian Continental Slope (SW Atlantic)

Living benthic foraminifera (>63 µm) were studied to characterize the continental slope of the Potiguar Basin (SW Atlantic). Foraminifers from the surface (0–2 cm), subsurface (2–5 cm), and integrated (0–5 cm) sediment layers were analyzed to verify their contribution to environmental characterization. It was also estimated if and which changes occur when the subsurface is added. Sampling stations were distributed in five transects in four isobaths (150, 400, 1000, and 2000 m). Sediment samples were fixed with 4% buffered formaldehyde and stained with Bengal rose. Were recorded 396 species in the surface layer, 228 in the subsurface, and 449 in integrating both layers. This study did not include tubular agglutinated species. The assemblages from 150 m isobath indicated the upper slope, from 400 m indicated the middle slope and the ones from the 2000 m indicated the lower slope. The surface layer’s assemblage at 1000 m isobath was more similar to the middle slope; in contrast, its subsurface layer’s assemblage had more similarity with the lower slope. Rarefaction curves, Permanova, and NMDS routines indicated a high resemblance between surface and integrated layers. Therefore, the first two centimeters were sufficient to characterize this region based on living benthic foraminifera.Fil: de Carvalho Santa Rosa, Luciana Cristina. Universidade Federal do Paraná; BrasilFil: Trevisan Disaró, Sibelle. Universidade Federal do Paraná; BrasilFil: Totah, Violeta Ines. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Museo Argentino de Ciencias Naturales "Bernardino Rivadavia"; ArgentinaFil: Watanabe, Silvia. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Museo Argentino de Ciencias Naturales "Bernardino Rivadavia"; ArgentinaFil: Bittencourt Guimaraes, Ana Tereza. Universidade Estadual Do Oeste Do Pará; Brasi

Estudo de filetagem e aproveitamento de seus residuos da tilapia nilotica oreochromis niloticus

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Carotid body chemosensitivity: Early biomarker of dysmetabolism in humans

info:eu-repo/semantics/publishedVersio

Crack-cocaine users have less family cohesion than alcohol users

Objective: Many studies correlate characteristics of family functioning and the development of drug addiction. This study sought to evaluate and compare the family environment styles of two groups of psychoactive substance users: 1) alcohol-only users and 2) crack-cocaine users. Methods: Three hundred and sixty-four users of alcohol, crack-cocaine, and other drugs, recruited from research centers in four Brazilian capitals participated in this study. Subjects were evaluated through the Family Environment Scale and the Addiction Severity Index, 6th version (ASI-6). ASI-6 t-scores were compared by analysis of variance (ANOVA) and post-hoc tests. A final model was obtained using a logistic regression analysis. All analyses were adjusted for partner, age, and psychiatric t-score. Results: We found a significant difference between groups in the cohesion subscale (p = 0.044). The post-hoc test revealed a difference of 1.06 points (95% CI 0.11-2.01) between groups 1 (6.45 +/- 0.28) and 2 (5.38 +/- 0.20). No significant between-group differences were observed in the other subscales. However, categorical analyses of variables regarding family dynamic showed that crack users more often reported that sometimes people in their family hit each other (30.4% vs. 13.2%, p = 0.007) and that people in their family frequently compared each other regarding work and/or school achievement (57.2% vs. 42.6%, p = 0.041). Conclusion: These results suggest that families of crack-cocaine users are less cohesive than families of alcohol users. This type of family environment may affect treatment outcome, and should thus be adequately approached.SENADNational Institutes of Health/National Institute on Drug AbuseUniv Fed Rio do Grande UFRGS, HCPA, CPAD, Porto Alegre, RS, BrazilHCPA, Unidade Bioestat, Porto Alegre, RS, BrazilUniv Fed Rio Grande do Sul, Lab Biossinais Fenomenol & Cognicao, Inst Psicol, Porto Alegre, RS, BrazilUniv Fed Sao Paulo UNIFESP, Dept Psicobiol, Sao Paulo, SP, BrazilUniv Fed Rio de Janeiro UFRJ, Inst Psiquiatria, Rio De Janeiro, RJ, BrazilUniv Fed Sao Paulo UNIFESP, Dept Psicobiol, Sao Paulo, SP, BrazilSENAD: TC 005/2005Web of Scienc

Excitotoxic mechanisms of apoptosis in the mammalian visual system following monocular visual deprivation

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Quality Of Sweat Test (st) Based On The Proportion Of Sweat Sodium (na) And Sweat Chloride (cl) As Diagnostic Parameter Of Cystic Fibrosis: Are We On The Right Way?

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)To assess the quality of sweat test (ST) based on the proportion of sweat sodium and sweat chloride as diagnostic parameter of cystic fibrosis (CF). Methods: A retrospective study of 5,721 sweat samples and subsequent descriptive analysis were carried out. The test was considered "of good quality" (correct) when: (i) sweat chloride was lower than 60 mEq/L, and sweat sodium was higher than sweat chloride; (ii) sweat chloride was higher than 60 mEq/L, and sweat sodium was lower than sweat chloride. Results: The study included 5,692/5,721 sweat samples of ST which had been requested due to clinical presentations compatible with CF and/or neonatal screenings with altered immunoreactive trypsinogen values. Considering the proportion of sweat sodium and sweat chloride as ST quality parameter, the test was performed correctly in 5,023/5,692 (88.2 %) sweat samples. The sweat chloride test results were grouped into four reference ranges for chloride (i) chloride >= 30 mEq/L: 3,651/5,692 (64.1 %); (ii) chloride = 40 mEq/L to = 60 mEq/L: 716/5,692 (12.6 %). In the comparative analysis, there was no association between ST quality and: (i) symptoms to indicate a ST [respiratory (p = 0.084), digestive (p = 0.753), nutritional (p = 0.824), and others (p = 0.136)], (ii) sweat weight (p = 0.416). However, there was a positive association with: (i) gender, (ii) results of ST (p < 0.001), (iii) chloride/sodium ratio (p < 0.001), (iv) subject's age at the time of ST [grouped according to category (p < 0.001) and numerical order (p < 0.001)]. For the subset of 169 patients with CF and two CFTR mutations Class I, II and/or III, in comparative analysis, there was a positive association with: (i) sweat chloride/sodium ratio (p < 0.001), (ii) sweat chloride values (p = 0.047), (iii) subject's age at the time of the ST grouped by numerical order (p = 0.001). Conclusions: Considering that the quality of ST can be assessed by levels of sweat sodium and sweat chloride, an increasing number of low-quality tests could be observed in our sweat samples. The quality of the test was associated with important factors, such as gender, CF diagnosis, and subjects' age.11103FALM: Fundacao de Amparo a Pesquisa do Estado de Sao Paulo (FAPESP) [2011/12939-4, 2015/12858-5]Fundo de Apoio a Pesquisa ao Ensino e a Extensao da Universidade Estadual de Campinas [0648/2015]JDR: FAPESP [2011/18845-1]Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP