Understanding Marine Microbes, the Driving Engines of the Ocean

When you hear the word microbes, what comes to your mind? Something much too small to see and that makes you fall ill? Just because some microbes cause diseases that does not mean they are all evil. For example, in the marine (ocean) environment, the vast majority of microbes are good ones. They are the “driving engines” of the ocean and are essential for the health of our whole planet. Unfortunately, most of the marine microbes and their interactions with the marine environment are poorly understood. So, it is important to get an idea of which microbes are helping us and how they are doing this. These data will provide scientists with the knowledge to fight against big global challenges, such as climate change and environmental pollution. Unfortunately, it is very hard to study marine microbes due to their microscopic size, huge diversity, and their big home – the ocean. Therefore, we would like to engage “citizen scientists” in this project to help us to sample marine microbes so that we can identify them

Hydration and the true water content of swellable clay minerals

Water affects biological, chemical and transportation processes as well as mechanical properties of soils. Thereby, clay mineral content determines the moisture balance of soils. In-situ moisture measurements depend on reliable calibration based on the true water content. Drying the soil at 105 °C is the most common procedure to determine the water content although it is known, swellable clay minerals retain hydration water up to much higher temperatures. The amplified water uptake and retention by swellable clay minerals results from hydration of interlayer cations. Thereby, the water binding mechanisms are complex due to structural heterogeneity and are determined by layer charge density and location of substitutions. While several experimental studies deal with the maximum water uptake of selected smectites and heating conditions for full dehydration a comprehensive understanding of the relation between the structure of smectites and water uptake/release is still missing. The Na-saturated smectite / water interface for the montmorillonite-beidellite series is investigated in the present work within the density functional theory (DFT). Layer charge is varied between 0.125 and 0.5 per formula unit [O10(OH)2] by substitution of Al3+ by Mg2+ in the octahedral sheet (montmorillonites) and by substitution of Si4+ by Al3+ in the tetrahedral sheets (beidellites). Starting from the water free supercells (with integer molar ratios), the number of water molecules is increased discretely. Stable hydration states (1H to 3H) do not necessarily correspond to the formation of water layers (1W to 3W) in the interlayer, which is deduced from the development of the basal spaces during hydration. With the help of ab initio thermodynamics, the energy states are related to temperature, and partial pressure of H2O and the resulting phase diagrams revealed hydration state in dependence of relative humidity (RH) as well as necessary temperatures for full dehydration to determine the true water content. Thereby it was shown that 2:1 layer silicates with a layer charge of 0.125 are swellable but reach only the 1H state even at 100% RH, but the removal of water molecules from the interlayer requires temperatures >110 °C and partial pressures of water <100 Pa. In contrast water uptake of smectites with layer charge 0.375 requires RH of >11% at room temperature, but dehydration occurs at moderate heating

Phenomenological analysis of K+ meson production in proton-nucleus collisions

Total and differential cross sections from literature, on the production of K+ mesons in pA interactions at projectile energies between T=0.8 and 2.9 GeV, covering the transition across the free nucleon-nucleon threshold at 1.58 GeV, have been investigated. From the target-mass dependence of the production cross sections no evidence for the expected change of the dominant reaction mechanism from two-step to direct kaon production was found. At T=1.0 GeV the A dependences of the total cross sections and of the most recent data from COSY-Juelich, differential cross sections measured under forward angles, are strongly different. The invariant K+ production cross sections show an overall exponential scaling behavior with the squared four-momentum transfer between the beam proton and the produced K+ meson for t< -0.05 GeV^2 independent of the beam energy and emission angle. The data from COSY-Juelich reveal a strongly different t dependence in the region of t>0 GeV^2. Further data at forward angles and different beam energies should be taken in order to explore this region of kinematically extreme conditions.Comment: 9 Pages, 11 Figure

Hadron Production in Heavy Ion Collisions

We review hadron production in heavy ion collisions with emphasis on pion and kaon production at energies below 2 AGeV and on partonic collectivity at RHIC energies.Comment: 31 pages, 26 figures, accepted for publication in Landolt-Boernstein Volume 1-23

Short- and long-term conditioning of a temperate marine diatom community to acidification and warming

Ocean acidification and greenhouse warming will interactively influence competitive success of key phytoplankton groups such as diatoms, but how long-term responses to global change will affect community structure is unknown. We incubated a mixed natural diatom community from coastal New Zealand waters in a short-term (two-week) incubation experiment using a factorial matrix of warming and/or elevated pCO2 and measured effects on community structure. We then isolated the dominant diatoms in clonal cultures and conditioned them for 1 year under the same temperature and pCO2 conditions from which they were isolated, in order to allow for extended selection or acclimation by these abiotic environmental change factors in the absence of interspecific interactions. These conditioned isolates were then recombined into ‘artificial’ communities modelled after the original natural assemblage and allowed to compete under conditions identical to those in the short-term natural community experiment. In general, the resulting structure of both the unconditioned natural community and conditioned ‘artificial’ community experiments was similar, despite differences such as the loss of two species in the latter. pCO2 and temperature had both individual and interactive effects on community structure, but temperature was more influential, as warming significantly reduced species richness. In this case, our short-term manipulative experiment with a mixed natural assemblage spanning weeks served as a reasonable proxy to predict the effects of global change forcing on diatom community structure after the component species were conditioned in isolation over an extended timescale. Future studies will be required to assess whether or not this is also the case for other types of algal communities from other marine regimes

K^+ production in the reaction 58Ni+58Ni^{58}Ni+^{58}Ni at incident energies from 1 to 2 AGeV

Semi-inclusive triple differential multiplicity distributions of positively charged kaons have been measured over a wide range in rapidity and transverse mass for central collisions of $^{58}$Ni with $^{58}$Ni nuclei. The transverse mass ($m_t$) spectra have been studied as a function of rapidity at a beam energy 1.93 AGeV. The $m_t$ distributions of K^+ mesons are well described by a single Boltzmann-type function. The spectral slopes are similar to that of the protons indicating that rescattering plays a significant role in the propagation of the kaon. Multiplicity densities have been obtained as a function of rapidity by extrapolating the Boltzmann-type fits to the measured distributions over the remaining phase space. The total K^+ meson yield has been determined at beam energies of 1.06, 1.45, and 1.93 AGeV, and is presented in comparison to existing data. The low total yield indicates that the K^+ meson can not be explained within a hadro-chemical equilibrium scenario, therefore indicating that the yield does remain sensitive to effects related to its production processes such as the equation of state of nuclear matter and/or modifications to the K^+ dispersion relation.Comment: 24 pages Latex (elsart) 7 PS figures to be submitted to Nucl. Phys

A global perspective on marine photosynthetic picoeukaryote community structure

A central goal in ecology is to understand the factors affecting the temporal dynamics and spatial distribution of microorganisms and the underlying processes causing differences in community structure and composition. However, little is known in this respect for photosynthetic picoeukaryotes (PPEs), algae that are now recognised as major players in marine CO2 fixation. Here, we analysed dot blot hybridisation and cloning–sequencing data, using the plastid-encoded 16S rRNA gene, from seven research cruises that encompassed all four ocean biomes. We provide insights into global abundance, α- and β-diversity distribution and the environmental factors shaping PPE community structure and composition. At the class level, the most commonly encountered PPEs were Prymnesiophyceae and Chrysophyceae. These taxa displayed complementary distribution patterns, with peak abundances of Prymnesiophyceae and Chrysophyceae in waters of high (25:1) or low (12:1) nitrogen:phosphorus (N:P) ratio, respectively. Significant differences in phylogenetic composition of PPEs were demonstrated for higher taxonomic levels between ocean basins, using Unifrac analyses of clone library sequence data. Differences in composition were generally greater between basins (interbasins) than within a basin (intrabasin). These differences were primarily linked to taxonomic variation in the composition of Prymnesiophyceae and Prasinophyceae whereas Chrysophyceae were phylogenetically similar in all libraries. These data provide better knowledge of PPE community structure across the world ocean and are crucial in assessing their evolution and contribution to CO2 fixation, especially in the context of global climate change

An upper limit on the electron-neutrino flux from the HiRes detector

Air-fluorescence detectors such as the High Resolution Fly's Eye (HiRes) detector are very sensitive to upward-going, Earth-skimming ultrahigh energy electron-neutrino-induced showers. This is due to the relatively large interaction cross sections of these high-energy neutrinos and to the Landau-Pomeranchuk-Migdal (LPM) effect. The LPM effect causes a significant decrease in the cross sections for bremsstrahlung and pair production, allowing charged-current electron-neutrino-induced showers occurring deep in the Earth's crust to be detectable as they exit the Earth into the atmosphere. A search for upward-going neutrino-induced showers in the HiRes-II monocular dataset has yielded a null result. From an LPM calculation of the energy spectrum of charged particles as a function of primary energy and depth for electron-induced showers in rock, we calculate the shape of the resulting profile of these showers in air. We describe a full detector Monte Carlo simulation to determine the detector response to upward-going electron-neutrino-induced cascades and present an upper limit on the flux of electron-neutrinos.Comment: 13 pages, 3 figures. submitted to Astrophysical Journa

Search for Correlations between HiRes Stereo Events and Active Galactic Nuclei

We have searched for correlations between the pointing directions of ultrahigh energy cosmic rays observed by the High Resolution Fly's Eye experiment and Active Galactic Nuclei (AGN) visible from its northern hemisphere location. No correlations, other than random correlations, have been found. We report our results using search parameters prescribed by the Pierre Auger collaboration. Using these parameters, the Auger collaboration concludes that a positive correlation exists for sources visible to their southern hemisphere location. We also describe results using two methods for determining the chance probability of correlations: one in which a hypothesis is formed from scanning one half of the data and tested on the second half, and another which involves a scan over the entire data set. The most significant correlation found occurred with a chance probability of 24%.Comment: 13 pages, 1 table, 5 figure