Indirect Effects of Bottom Fishing on the Productivity of Marine Fish

One quarter of marine fish production is caught with bottom trawls and dredges on continental shelves around the world. Towed bottom-fishing gears typically kill 20-50 per cent of the benthic invertebrates in their path, depending on gear type, substrate and vulnerability of particular taxa. Particularly vulnerable are epifaunal species, which stabilize the sediment and provide habitat for benthic invertebrates. To identify the habitats, fisheries or target species most likely to be affected, we review evidence of the indirect effects of bottom fishing on fish production. Recent studies have found differences in the diets of certain species in relation to bottom fishing intensity, thereby linking demersal fish to their benthic habitats at spatial scales of ~10 km. Bottom fishing affects diet composition and prey quality rather than the amount of prey consumed; scavenging of discarded by-catch makes only a small contribution to yearly food intake. Flatfish may benefit from light trawling levels on sandy seabeds, while higher-intensity trawling on more vulnerable habitats has a negative effect. Models suggest that reduction in the carrying capacity of habitats by bottom fishing could lead to lower equilibrium yield and a lower level of fishing mortality to obtain maximum yield. Trawling effort is patchily distributed - small fractions of fishing grounds are heavily fished, while large fractions are lightly fished or unfished. This patchiness, coupled with the foraging behaviour of demersal fish, may mitigate the indirect effects of bottom fishing on fish productivity. Current research attempts to scale up these localized effects to the population level

Coloured overlays and precision-tinted lenses: poor repeatability in a sample of adults diagnosed with visual stress

Purpose Visual stress consists of perceived distortions or discomfort while reading. It is claimed that these symptoms are alleviated by viewing through coloured lenses or overlays, with a specific colour required for each individual. This has been explained on the basis of altered visual cortex excitation as affected by the spectral content of the viewing light. If symptoms are indeed alleviated by a particular colour that has an impact on the individual's visual system, we would expect that selection of the most beneficial colour would be repeatable. The aim of this study was to determine whether this is the case. Methods Twenty-one participants (mean age 26 years (range 8–55 years); 12 female, nine male) with visual stress and no other uncorrected ocular or visual anomaly were recruited. Each participant selected the colour most beneficial in alleviating their symptoms from a standard set of 10 coloured overlays, and underwent intuitive colorimetry in which the most beneficial of a wide range of chromatic illuminance settings was selected. Without prescribing an overlay at the first appointment, this process was repeated on a second occasion at a mean of 25 days later. Results About half of the participants (n = 10) chose the same (n = 7) or similar (with one common colour in both choices; n = 3) coloured overlay on the two occasions, while 11 participants chose a completely different overlay colour. Across all participants, the colorimetry setting shifted by, on average, 9.6 just noticeable differences, indicating that the colours were perceptually very different. Conclusion These findings suggest that people with visual stress are unlikely to find exactly the same colour to be optimal on different occasions, and raise questions about the need for precise colour specification in tinted lenses for visual stress

Coloured overlays and precision-tinted lenses: poor repeatability in a sample of adults diagnosed with visual stress (vol 37, pg 542, 2017)

Purpose Visual stress consists of perceived distortions or discomfort while reading. It is claimed that these symptoms are alleviated by viewing through coloured lenses or overlays, with a specific colour required for each individual. This has been explained on the basis of altered visual cortex excitation as affected by the spectral content of the viewing light. If symptoms are indeed alleviated by a particular colour that has an impact on the individual's visual system, we would expect that selection of the most beneficial colour would be repeatable. The aim of this study was to determine whether this is the case. Methods Twenty-one participants (mean age 26 years (range 8–55 years); 12 female, nine male) with visual stress and no other uncorrected ocular or visual anomaly were recruited. Each participant selected the colour most beneficial in alleviating their symptoms from a standard set of 10 coloured overlays, and underwent intuitive colorimetry in which the most beneficial of a wide range of chromatic illuminance settings was selected. Without prescribing an overlay at the first appointment, this process was repeated on a second occasion at a mean of 25 days later. Results About half of the participants (n = 10) chose the same (n = 7) or similar (with one common colour in both choices; n = 3) coloured overlay on the two occasions, while 11 participants chose a completely different overlay colour. Across all participants, the colorimetry setting shifted by, on average, 9.6 just noticeable differences, indicating that the colours were perceptually very different. Conclusion These findings suggest that people with visual stress are unlikely to find exactly the same colour to be optimal on different occasions, and raise questions about the need for precise colour specification in tinted lenses for visual stress

Investigating the distance limit of a metal nanoparticle based spectroscopic ruler

Conventional Förster resonance energy transfer (FRET) processes involving a pair of fluorophore and organic quencher are restricted to an upper distance limit of ~10 nm. The application of a metal nanoparticle as a quencher can overcome the distance barrier of the traditional FRET technique. However, no standard distance dependence of this resonance energy transfer (RET) process has been firmly established. We have investigated the nonradiative energy transfer process between an organic donor (fluorescein) and gold nanoparticle quencher connected by double stranded (ds) DNA. The quenching efficiency of the gold nanoparticle as a function of distance between the donor and acceptor was determined by time-resolved lifetime analyses of the donor. Our results showed a 1/d4 distance dependence for the RET process for longer distances (>10 nm) and 1/d6 distance dependence for shorter distances (<10 nm). Our results clearly indicate the applicability of metal nanoparticle based quenchers for studying systems that exceed the 10 nm FRET barrier

An architecture for User-centric Management of Intelligent Environments

Ubiquitous computing environments are intelligent environments that have a wide array of embedded sensors and other artefacts that provide information regarding the current state of the physical environment. Utilisation of such information, known as context information has the potential to alter the natural surroundings of users in order to adapt the environment to suit the user's needs and assist in their tasks. These alterations in the environment should occur both transparently and seamlessly in order to minimise the impact on user's attention in such a way that the user's focus is not shifted from the task at hand. Satisfying user requirements in this manner, particularly in an environment that is so complex and dynamic raises a multitude of challenges. It is our belief that these challenges can be attributed to three distinct domains, namely management of personal information and management of context information combined with policy based management system. In the proposed paper we describe a management architecture for these intelligent environments that, through coordinated invocation of system and user policies triggered through the analysis of context information, taking into account business goals, can achieve a balance between user's desires and intentions while upholding system constraints

PINT: A Modern Software Package for Pulsar Timing

Over the past few decades, the measurement precision of some pulsar timing experiments has advanced from ~10 μs to ~10 ns, revealing many subtle phenomena. Such high precision demands both careful data handling and sophisticated timing models to avoid systematic error. To achieve these goals, we present PINT (PINT Is Not Tempo3), a high-precision Python pulsar timing data analysis package, which is hosted on GitHub and available on the Python Package Index (PyPI) as pint-pulsar. PINT is well tested, validated, object oriented, and modular, enabling interactive data analysis and providing an extensible and flexible development platform for timing applications. It utilizes well-debugged public Python packages (e.g., the NumPy and Astropy libraries) and modern software development schemes (e.g., version control and efficient development with git and GitHub) and a continually expanding test suite for improved reliability, accuracy, and reproducibility. PINT is developed and implemented without referring to, copying, or transcribing the code from other traditional pulsar timing software packages (e.g., Tempo/Tempo2) and therefore provides a robust tool for cross-checking timing analyses and simulating pulse arrival times. In this paper, we describe the design, use, and validation of PINT, and we compare timing results between it and Tempo and Tempo2

Investigating the effects of mobile bottom fishing on benthic biota:A systematic review protocol

Background Mobile bottom fishing, such as trawling and dredging, is the most widespread direct human impact on marine benthic systems. Knowledge of the impacts of different gear types on different habitats, the species most sensitive to impacts and the potential for habitats to recover are often needed to inform implementation of an ecosystem approach to fisheries and strategies for biodiversity conservation. This knowledge helps to identify management options that maximise fisheries yield whilst minimising negative impacts on benthic systems. Methods/design The methods are designed to identify and collate evidence from experimental studies (e.g. before/after, control/impact) and comparative studies (spanning a gradient of fishing intensity) to identify changes in state (numbers, biomass, diversity etc.) of benthic biota (flora and fauna), resulting from a variety of mobile bottom fishing scenarios. The primary research question that the outputs will be used to address is: “to what extent does a given intensity of bottom fishing affect the abundance and/or diversity of benthic biota?” Due to the variety of gear and habitat types studied, the primary question will be closely linked with secondary questions. These include: “how does the effect of bottom fishing on various benthic biota metrics (species, faunal type, trait, taxon etc.) vary with (1) gear type and (2) habitat, and (3) gear type-habitat interactions?” and (4) “how might properties of the community and environment affect the resilience (and recovery potential) of a community to bottom fishing?

INTERASPIRE:an International Survey of Coronary Patients; Their Cardiometabolic, Renal and Biomarker Status; and the Quality of Preventive Care Delivered in All WHO Regions: In Partnership with the World Heart Federation, European Society of Cardiology, Asia Pacific Society of Cardiology, InterAmerican Society of Cardiology, and PanAfrican Society of Cardiology.

Purpose of Review To describe the INTERASPIRE scientific protocol-an international survey of secondary prevention of coronary heart disease (CHD). Recent Findings This international survey is being conducted through National Societies of Cardiology in selected countries from each of the six WHO regions and has the following overall aims: (i) describe prevalence of cardiometabolic and renal risk factors together with biomarkers in CHD patients; (ii) describe current risk factor management through lifestyle changes and cardioprotective drug therapies; (iii) provide an objective assessment of clinical implementation of preventive care by comparison with the lifestyle and risk factor targets defined in international and national guidelines; (iv) investigate the reasons for variation in preventive cardiology practice between regions and countries; and (v) promote the principles of best preventive cardiology practice. This international survey will provide a unique picture of CHD patients; their cardiometabolic, renal and biomarker status; lifestyle and therapeutic management; and the quality of preventive care provided in all WHO regions

Trawl impacts on the relative status of biotic communities of seabed sedimentary habitats in 24 regions worldwide

Bottom trawling is widespread globally and impacts seabed habitats. However, risks from trawling remain unquantified at large scales in most regions. We address these issues by synthesizing evidence on the impacts of different trawl-gear types, seabed recovery rates, and spatial distributions of trawling intensity in a quantitative indicator of biotic status (relative amount of pretrawling biota) for sedimentary habitats, where most bottom-trawling occurs, in 24 regions worldwide. Regional average status relative to an untrawled state (=1) was high (>0.9) in 15 regions, but 0.8. These assessments are first order, based on parameters estimated with uncertainty from meta-analyses; we recommend regional analyses to refine parameters for local specificity. Nevertheless, our results are sufficiently robust to highlight regions needing more effective management to reduce exploitation and improve stock sustainability and seabed environmental status—while also showing seabed status was high (>0.95) in regions where catches of trawled fish stocks meet accepted benchmarks for sustainable exploitation, demonstrating that environmental benefits accrue from effective fisheries management. Furthermore, regional seabed status was related to the proportional area swept by trawling, enabling preliminary predictions of regional status when only the total amount of trawling is known. This research advances seascape-scale understanding of trawl impacts in regions around the world, enables quantitative assessment of sustainability risks, and facilitates implementation of an ecosystem approach to trawl fisheries management globally

Selection of indicators for assessing and managing the impacts of bottom trawling on seabed habitats

Bottom trawl fisheries are the most widespread\ua0source of anthropogenic physical disturbance to seabed habitats. Development of fisheries-, conservation- and ecosystem-based management strategies requires the selection of indicators of the impact of bottom trawling on the state of benthic biota. Many indicators have been proposed, but no rigorous test of a range of candidate indicators against nine commonly agreed criteria (concreteness, theoretical basis, public awareness, cost, measurement, historical data, sensitivity, responsiveness, specificity) has been performed. Here, we collated data from 41 studies that compared the benthic biota in trawled areas with those in control locations (that were either not trawled or trawled infrequently), examining seven potential indicators (numbers and biomass for individual taxa and whole communities, evenness, Shannon–Wiener diversity and species richness) to assess their performance against the set of nine criteria. The effects of trawling were stronger on whole-community numbers and biomass than for individual taxa. Species richness was also negatively affected by trawling but other measures of diversity were not. Community numbers and biomass met all criteria, taxa numbers and biomass and species richness satisfied most criteria, but evenness and Shannon–Wiener diversity did not respond to trawling and only met few criteria, and hence are not suitable state indicators of the effect of bottom trawling. Synthesis and applications. An evaluation of each candidate indicator against a commonly agreed suite of desirable properties coupled with the outputs of our meta-analysis showed that whole-community numbers of individuals and biomass are the most suitable indicators of bottom trawling impacts as they performed well on all criteria. Strengths of these indicators are that they respond strongly to trawling, relate directly to ecosystem functioning and are straightforward to measure. Evenness and Shannon–Wiener diversity are not responsive to trawling and unsuitable for the monitoring and assessment of bottom trawl impacts