Resonance modes in a 1D medium with two purely resistive boundaries: calculation methods, orthogonality and completeness

Studying the problem of wave propagation in media with resistive boundaries can be made by searching for "resonance modes" or free oscillations regimes. In the present article, a simple case is investigated, which allows one to enlighten the respective interest of different, classical methods, some of them being rather delicate. This case is the 1D propagation in a homogeneous medium having two purely resistive terminations, the calculation of the Green function being done without any approximation using three methods. The first one is the straightforward use of the closed-form solution in the frequency domain and the residue calculus. Then the method of separation of variables (space and time) leads to a solution depending on the initial conditions. The question of the orthogonality and completeness of the complex-valued resonance modes is investigated, leading to the expression of a particular scalar product. The last method is the expansion in biorthogonal modes in the frequency domain, the modes having eigenfrequencies depending on the frequency. Results of the three methods generalize or/and correct some results already existing in the literature, and exhibit the particular difficulty of the treatment of the constant mode

Nucleosome-CHD4 chromatin remodeller structure maps human disease mutations

Chromatin remodelling plays important roles in gene regulation during development, differentiation and in disease. The chromatin remodelling enzyme CHD4 is a component of the NuRD and ChAHP complexes that are involved in gene repression. Here we report the cryo-electron microscopy (cryo-EM) structure of Homo sapiens CHD4 engaged with a nucleosome core particle in the presence of the non-hydrolysable ATP analogue AMP-PNP at an overall resolution of 3.1 Å. The ATPase motor of CHD4 binds and distorts nucleosomal DNA at superhelical location (SHL) +2, supporting the 'twist defect' model of chromatin remodelling. CHD4 does not induce unwrapping of terminal DNA, in contrast to its homologue Chd1, which functions in gene activation. Our structure also maps CHD4 mutations that are associated with human cancer or the intellectual disability disorder Sifrim-Hitz-Weiss syndrome

Noise Characteristics of a Four-Jet Impingement Device Inside a Broadband Engine Noise Simulator

The noise generation mechanisms for four directly impinging supersonic jets are investigated employing implicit large eddy simulations with a higher-order accurate weighted essentially non-oscillatory shock-capturing scheme. Impinging jet devices are often used as an experimental apparatus to emulate a broadband noise source. Although such devices have been used in many experiments, a detailed investigation of the noise generation mechanisms has not been conducted before. Thus, the underlying physical mechanisms that are responsible for the generation of sound waves are not well understood. The flow field is highly complex and contains a wide range of temporal and spatial scales relevant for noise generation. Proper orthogonal decomposition of the flow field is utilized to characterize the unsteady nature of the flow field involving unsteady shock oscillations, large coherent turbulent flow structures, and the sporadic appearance of vortex tubes in the center of the impingement region. The causality method based on Lighthill's acoustic analogy is applied to link fluctuations of flow quantities inside the source region to the acoustic pressure in the far field. It will be demonstrated that the entropy fluctuation term in the Lighthill's stress tensor plays a vital role in the noise generation process. Consequently, the understanding of the noise generation mechanisms is employed to develop a reduced-order linear acoustic model of the four-jet impingement device. Finally, three linear acoustic FJID models are used as broadband noise sources inside an engine nacelle and the acoustic scattering results are validated against far-field acoustic experimental data

GMRES implementations and residual smoothing techniques for solving ill-posed linear systems

AbstractThere are verities of useful Krylov subspace methods to solve nonsymmetric linear system of equations. GMRES is one of the best Krylov solvers with several different variants to solve large sparse linear systems. Any GMRES implementation has some advantages. As the solution of ill-posed problems are important. In this paper, some GMRES variants are discussed and applied to solve these kinds of problems. Residual smoothing techniques are efficient ways to accelerate the convergence speed of some iterative methods like CG variants. At the end of this paper, some residual smoothing techniques are applied for different GMRES methods to test the influence of these techniques on GMRES implementations

A self-adaptive segmentation method for a point cloud

The segmentation of a point cloud is one of the key technologies for three-dimensional reconstruction, and the segmentation from three-dimensional views can facilitate reverse engineering. In this paper, we propose a self-adaptive segmentation algorithm, which can address challenges related to the region-growing algorithm, such as inconsistent or excessive segmentation. Our algorithm consists of two main steps: automatic selection of seed points according to extracted features and segmentation of the points using an improved region-growing algorithm. The benefits of our approach are the ability to select seed points without user intervention and the reduction of the influence of noise. We demonstrate the robustness and effectiveness of our algorithm on different point cloud models and the results show that the segmentation accuracy rate achieves 96%

Engineering Support Systems for Industrial Machines and Plants

In the business of industrial machines and plants, rapid and detailed estimates for planning installation, replacement of equipment, or maintenance work are key requirements for meeting the demands for greater reliability, lower costs and for maintaining safe and secure operation. These demands have been addressed by developing technology driven by IT. When replacing equipment at complex building or plants with high equipment density, the existing state of the installation locations and transportation routes for old and new equipment need to be properly measured. We have met this need by developing parts recognition technology based on 3D measurement, and by developing high-speed calculation technology of optimal routes for installation parts. This chapter provides an overview of these development projects with some real business application results

Structural basis of Integrator-dependent RNA polymerase II termination

The Integrator complex can terminate RNA polymerase II (Pol II) in the promoter-proximal region of genes. Previous work has shed light on how Integrator binds to the paused elongation complex consisting of Pol II, the DRB sensitivity-inducing factor (DSIF) and the negative elongation factor (NELF) and how it cleaves the nascent RNA transcript, but has not explained how Integrator removes Pol II from the DNA template. Here we present three cryo-electron microscopy structures of the complete Integrator–PP2A complex in different functional states. The structure of the pre-termination complex reveals a previously unresolved, scorpion-tail-shaped INTS10–INTS13–INTS14–INTS15 module that may use its ‘sting’ to open the DSIF DNA clamp and facilitate termination. The structure of the post-termination complex shows that the previously unresolved subunit INTS3 and associated sensor of single-stranded DNA complex (SOSS) factors prevent Pol II rebinding to Integrator after termination. The structure of the free Integrator–PP2A complex in an inactive closed conformation reveals that INTS6 blocks the PP2A phosphatase active site. These results lead to a model for how Integrator terminates Pol II transcription in three steps that involve major rearrangements

Long-term optical, UV, and X-ray continuum variations in the changing-look AGN HE 1136-2304

A strong outburst in the X-ray continuum and a change of its Seyfert spectral type was detected in HE 1136-2304 in 2014. The spectral type changed from nearly Seyfert 2 type (1.95) to Seyfert 1.5 type in comparison to previous observations taken ten to twenty years before. In a subsequent variability campaign we wanted to investigate whether this outburst was a single event or whether the variability pattern following the outburst was similar to those seen in other variable Seyfert galaxies. In addition to a SALT spectral variability campaign, we carried out optical continuum as well as X-ray and UV (Swift) monitoring studies from 2014 to 2017. HE 1136-2304 strongly varied on timescales of days to months from 2014 to 2017. No systematic trends were found in the variability behavior following the outburst in 2014. A general decrease in flux would have been expected for a tidal disruption event. This could not be confirmed. More likely the flux variations are connected to irregular fluctuations in the accretion rate. The strongest variability amplitudes have been found in the X-ray regime: HE 1136-2304 varied by a factor of eight during 2015. The amplitudes of the continuum variability (from the UV to the optical) systematically decreased with wavelength following a power law F_var = a ${\times}$ {\lambda}^-c with c = 0.84. There is a trend that the B-band continuum shows a delay of three light days with respect to the variable X-ray flux. The Seyfert type 1.5 did not change despite the strong continuum variations for the period between 2014 and 2017.Comment: 25 pages, 21 figures, Astronomy & Astrophysics in pres

Broad-line region structure and line profile variations in the changing look AGN HE1136-2304

A strong X-ray outburst was detected in HE1136-2304 in 2014. Accompanying optical spectra revealed that the spectral type has changed from a nearly Seyfert 2 type (1.95), classified by spectra taken 10 and 20 years ago, to a Seyfert 1.5 in our most recent observations. We seek to investigate a detailed spectroscopic campaign on the spectroscopic properties and spectral variability behavior of this changing look AGN and compare this to other variable Seyfert galaxies. We carried out a detailed spectroscopic variability campaign of HE1136-2304 with the 10 m Southern African Large Telescope (SALT) between 2014 December and 2015 July. The broad-line region (BLR) of HE1136-2304 is stratified with respect to the distance of the line-emitting regions. The integrated emission line intensities of Halpha, Hbeta, HeI 5876, and HeII 4686 originate at distances of 15.0 (+4.2,-3.8), 7.5 (+4.6,-5.7), 7.3 (+2.8,-4.4), and 3.0 (+5.3,-3.7) light days with respect to the optical continuum at 4570AA. The variability amplitudes of the integrated emission lines are a function of distance to the ionizing continuum source as well. We derived a central black hole mass of 3.8 (+-3.1) 10exp(7) M_solar based on the line widths and distances of the BLR. The outer line wings of all BLR lines respond much faster to continuum variations indicating a Keplerian disk component for the BLR. The response in the outer wings is about two light days shorter than the response of the adjacent continuum flux with respect to the ionizing continuum flux. The vertical BLR structure in HE1136-2304 confirms a general trend that the emission lines of narrow line active galactic nuclei (AGNs) originate at larger distances from the midplane in comparison to AGNs showing broader emission lines. Otherwise, the variability behavior of this changing look AGN is similar to that of other AGN.Comment: 21 pages, 33 figure

FACT maintains chromatin architecture and thereby stimulates RNA polymerase II pausing during transcription in vivo

Facilitates chromatin transcription (FACT) is a histone chaperone that supports transcription through chromatin in vitro, but its functional roles in vivo remain unclear. Here, we analyze the in vivo functions of FACT with the use of multi-omics analysis after rapid FACT depletion from human cells. We show that FACT depletion destabilizes chromatin and leads to transcriptional defects, including defective promoter-proximal pausing and elongation, and increased premature termination of RNA polymerase II. Unexpectedly, our analysis revealed that promoter-proximal pausing depends not only on the negative elongation factor (NELF) but also on the +1 nucleosome, which is maintained by FACT