Further studies on Mouthpart Receptors in decapoda crustacea

In the lobster Homarus gammarus (L.) (= Homarus vulgaris M. Ed.) three bilateral groups of proprioceptors are arranged around the mouth. These strand receptor organs, termed Mouthpart Receptors (MPRs) 1, 2 and 3, were described previously and their physiological responses, mainly to mandibular movements, were characterised (Laverack and Dando, 1968).Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/47103/1/359_2004_Article_BF00298189.pd

Cetaceans in the Mediterranean Sea. Encounter rate, dominant species, and diversity hotspots

We investigated the presence and diversity of cetaceans in the Mediterranean Sea, analysing the data collected by 32 different research units, over a period of 15 years (2004–2018), and shared on the common web-GIS platform named Intercet. We used the encounter rate, the species prevalence, and the Shannon diversity index as parameters for data analysis. The results show that cetacean diversity, in the context of the Mediterranean basin, is generally quite low when compared with the eastern Atlantic, as few species, namely the striped dolphin, the bottlenose dolphin, the fin whale, and the sperm whale, dominate over all the others. However, some areas, such as the Alboran Sea or the north-western Mediterranean Sea, which includes the Pelagos Sanctuary (the Specially Protected Area of Mediterranean Interest located in the northern portion of the western basin), show higher levels of diversity and should be considered hotspots to be preserved. Primary production and seabed profile seem to be the two main drivers influencing the presence and distribution of cetaceans, with the highest levels of diversity observed in areas characterized by high levels of primary production and high bathymetric variability and gradient. This collective work underlines the importance of data sharing to deepen our knowledge on marine fauna at the scale of the whole Mediterranean Sea and encourages greater efforts in the networking process, also to accomplish the requirements of the Marine Strategy Framework Directive, with particular reference to Descriptor 1: biological diversity is maintained

The Gene Regulatory Cascade Linking Proneural Specification with Differentiation in Drosophila Sensory Neurons

Temporal expression profiling of sensory precursor cells reveals how the atonal proneural transcription factor regulates a specialized neuronal differentiation pathway

Biogeography in the deep : hierarchical population genomic structure of two beaked whale species

Funding for this research was provided by the Office of Naval Research, Award numbers N000141613017 and N000142112712. ABO was supported by a partial studentship from the University of St Andrews, School of Biology; OEG by the Marine Alliance for Science and Technology for Scotland (Scottish Funding Council grant HR09011); ELC by a Rutherford Discovery Fellowship from the Royal Society of New Zealand Te Aparangi; NAS by a Ramon y Cajal Fellowship from the Spanish Ministry of Innovation; MLM by the European Union’s Horizon 2020 Research and Innovation Programme (Marie Skłodowska-Curie grant 801199); CR by the Marine Institute (Cetaceans on the Frontier) and the Irish Research Council; and MTO by the Hartmann Foundation.The deep sea is the largest ecosystem on Earth, yet little is known about the processes driving patterns of genetic diversity in its inhabitants. Here, we investigated the macro- and microevolutionary processes shaping genomic population structure and diversity in two poorly understood, globally distributed, deep-sea predators: Cuvier’s beaked whale (Ziphius cavirostris) and Blainville’s beaked whale (Mesoplodon densirostris). We used double-digest restriction associated DNA (ddRAD) and whole mitochondrial genome (mitogenome) sequencing to characterise genetic patterns using phylogenetic trees, cluster analysis, isolation-by-distance, genetic diversity and differentiation statistics. Single nucleotide polymorphisms (SNPs; Blainville’s n = 43 samples, SNPs=13988; Cuvier’s n = 123, SNPs= 30479) and mitogenomes (Blainville’s n = 27; Cuvier’s n = 35) revealed substantial hierarchical structure at a global scale. Both species display significant genetic structure between the Atlantic, Indo-Pacific and in Cuvier’s, the Mediterranean Sea. Within major ocean basins, clear differentiation is found between genetic clusters on the east and west sides of the North Atlantic, and some distinct patterns of structure in the Indo-Pacific and Southern Hemisphere. We infer that macroevolutionary processes shaping patterns of genetic diversity include biogeographical barriers, highlighting the importance of such barriers even to highly mobile, deep-diving taxa. The barriers likely differ between the species due to their thermal tolerances and evolutionary histories. On a microevolutionary scale, it seems likely that the balance between resident populations displaying site fidelity, and transient individuals facilitating gene flow, shapes patterns of connectivity and genetic drift in beaked whales. Based on these results, we propose management units to facilitate improved conservation measures for these elusive species.Publisher PDFPeer reviewe

The challenge of habitat modelling for threatened low density species using heterogeneous data : the case of Cuvier’s beaked whales in the Mediterranean

We are grateful to the ACCOBAMS Secretariat for their support in this work, including a small grant for the analysis.The Mediterranean population of Cuvieŕs beaked whale (Ziphius cavirostris), a deep-diving cetacean, is genetically distinct from the Atlantic, and subject to a number of conservation threats, in particular underwater noise. It is also cryptic at the surface and relatively rare, so obtain robust knowledge on distribution and abundance presents unique challenges. Here we use multiplatform and multiyear survey data to analyse the distribution and abundance of this species across the Mediterranean Sea. We use a novel approach combining heterogeneous data gathered with different methods to obtain a single density index for the region. A total of 594,996 km of survey effort and 507 sightings of Cuvier’s beaked whales, from 1990 to 2016, were pooled together from 24 different sources. Data were divided into twelve major groups according to platform height, speed and sea state. Both availability bias and effective strip width were calculated from the sightings with available perpendicular distance data. This was extrapolated to the rest of the sightings for each of the twelve groups. Habitat preference models were fitted into a GAM framework using counts of groups as a response variable with the effective searched area as an offset. Depth, coefficient of variation of depth, longitude and marine regions (as defined by the International Hydrographic Organization) were identified as important predictors. Predicted abundance of groups per grid cell were multiplied by mean group size to obtain a prediction of the abundance of animals. A total abundance of 5799 (CV = 24.0%) animals was estimated for the whole Mediterranean basin. The Alborán Sea, Ligurian Sea, Hellenic Trench, southern Adriatic Sea and eastern Ionian Sea were identified as being the main hot spots in the region. It is important to urge that the relevant stakeholders incorporate this information in the planning and execution of high risk activities in these high-risk areas.PostprintPeer reviewe

The Drosophila homologue of Rootletin is required for mechanosensory function and ciliary rootlet formation in chordotonal sensory neurons

BACKGROUND: In vertebrates, rootletin is the major structural component of the ciliary rootlet and is also part of the tether linking the centrioles of the centrosome. Various functions have been ascribed to the rootlet, including maintenance of ciliary integrity through anchoring and facilitation of transport to the cilium or at the base of the cilium. In Drosophila, Rootletin function has not been explored. RESULTS: In the Drosophila embryo, Rootletin is expressed exclusively in cell lineages of type I sensory neurons, the only somatic cells bearing a cilium. Expression is strongest in mechanosensory chordotonal neurons. Knock-down of Rootletin results in loss of ciliary rootlet in these neurons and severe disruption of their sensory function. However, the sensory cilium appears largely normal in structure and in localisation of proteins suggesting no strong defect in ciliogenesis. No evidence was found for a defect in cell division. CONCLUSIONS: The role of Rootletin as a component of the ciliary rootlet is conserved in Drosophila. In contrast, lack of a general role in cell division is consistent with lack of centriole tethering during the centrosome cycle in Drosophila. Although our evidence is consistent with an anchoring role for the rootlet, severe loss of mechanosensory function of chordotonal (Ch) neurons upon Rootletin knock-down may suggest a direct role for the rootlet in the mechanotransduction mechanism itself

Natural markings of Cuvier’s beaked whale Ziphius cavirostris in the Mediterranean Sea

Errors in analysis using natural marks have been recognised since the early  development of mark-recapture techniques. In this nine-year study, the mark types present on Cuvier’s beaked whalesZiphius cavirostris in the Mediterranean Sea were categorised in order to assess the reliability of natural marks for long-term photo-identification studies. Mark prevalence, abundance and gain/loss rates among age/sex classes were investigated. Results showed that Cuvier’s beaked whales were extensively marked (96% of population; mean = 48 marks per individual, range 0–169), with up to 10 different mark types. However, only five mark types should be considered reliable: notch, large scar, back indentation, medium scrape and large stripe. Marks caused by intraspecific interaction were the most abundant and prevalent mark types. In high-quality photographs, 71% of the population was reliably marked, but reliable marks were unevenly distributed within the population and their prevalence appeared to be strongly correlated to age and sex of individuals. The gain rate of scrapes that could be used reliably for identification was six times higher in mature males than females of the same age. This was the case for mature as well as immature males, suggesting that aggressive interaction among males may start early in their life, before reaching maturity. This difference between sexes may cause an over-representation of males in a typical photo-identification database, especially among immature individuals. Keywords: heterogeneity, mark rate, natural mark, photo-identification, scarringAfrican Journal of Marine Science 2011, 33(1): 45–5

Microplastic abundance and biodiversity richness overlap: Identification of sensitive areas in the Western Ionian Sea

Plastic pollution in the Mediterranean Sea has been widely reported, but its impact on biodiversity has not been fully explored. Simultaneous sampling of microplastics (MP) with a manta net and surveys of large marine vertebrates were conducted along the coastal waters of Sicily (Western Ionian Sea). A total of 17 neustonic samples have been collected and 17 marine species (cetaceans, sea turtles, seabirds, and fish) have been sighted in the target area. Kernel density estimation was evaluated to highlight a possible overlap between the presence of large marine fauna and MP densities to provide a preliminary risk assessment. The highest biodiversity and MP concentration (0.197 ± 0.130 items/m2) were observed in the southernmost part of the studied area. The overlap between biodiversity hotspots and the occurrence of MP, potential contribute to the identification of sensitive areas of exposure in a poorly studied region