Phytosociological study of the Kruger National Park, south of the Sabie River, Mpumalanga Province, South Africa

No abstract available CopyrightDissertation (MSc)--University of Pretoria, 2010.Plant Scienceunrestricte

Plant communities of the Soutpansberg Arid Northern Bushveld

The Soutpansberg Arid Northern Bushveld is one of eight major vegetation types (MVT) described for the Soutpansberg-Blouberg region. The plant communities of this MVT are described in detail. Main ecological drivers of the vegetation structure and species composition of these communities are discussed and some conservation recommendations are made. Phytosociological data from a subset of 72 Braun-Blanquet sample plots collected in the Soutpansberg Arid Northern Bushveld were classifi ed using Two-way Indicator Species Analysis (TWINSPAN) and ordinated using a Detrended Correspondence Analysis (DECORANA). The resulting classifi cation was further refi ned with table-sorting procedures based on the Braun-Blanquet fl oristic-sociological approach to vegetation classifi cation using the computer software MEGATAB and JUICE. Eight plant communities were identifi ed and described as Commiphora tenuipetiolata-Adansonia digitata short open woodland, Ledebouria ovatifolia-Commiphora mollis short bushland, Phyllanthus reticulatus- Acacia nigrescens short bushland, Tinnea rhodesiana-Combretum apiculatum short bushland, Dichrostachys cinerea subsp. africana-Spirostachys africana low thickets, Themeda triandra-Pterocarpus rotundifolius short closed grassland on steep basaltic slopes, Cyperus albostriatus-Syzygium cordatum sandveld wetlands, and Sesamothamnus lugardii-Catophractes alexandri tall sparse shrubland. These plant communities are event-driven ecosystems, predominantly infl uenced by frequent droughts, exposure to desiccation and unpredictable rainfall events. The complex topography of the Soutpansberg further contributes to the aridity of these ecosystems. The classifi cation and ordination analyses show similar groupings in the vegetation of the Soutpansberg Arid Mountain Bushveld. This confi rms the usefulness of complimentary analysis, using both classifi cation and ordination methods on a single data set in order to examine patterns and to search for group structure. CONSERVATION IMPLICATIONS: The results from this study will alter existing regional vegetation maps profoundly. The described plant communities of these arid event-driven ecosystems should be used as benchmark examples of the region’s primary vegetation. Conservation and management planning should be based on these vegetation units.The National Research Foundationhttp://www.koedoe.co.zaam201

HNRNPC haploinsufficiency affects alternative splicing of intellectual disability-associated genes and causes a neurodevelopmental disorder

Heterogeneous nuclear ribonucleoprotein C (HNRNPC) is an essential, ubiquitously abundant protein involved in mRNA processing. Genetic variants in other members of the HNRNP family have been associated with neurodevelopmental disorders. Here, we describe 13 individuals with global developmental delay, intellectual disability, behavioral abnormalities, and subtle facial dysmorphology with heterozygous HNRNPC germline variants. Five of them bear an identical in-frame deletion of nine amino acids in the extreme C terminus. To study the effect of this recurrent variant as well as HNRNPC haploinsufficiency, we used induced pluripotent stem cells (iPSCs) and fibroblasts obtained from affected individuals. While protein localization and oligomerization were unaffected by the recurrent C-terminal deletion variant, total HNRNPC levels were decreased. Previously, reduced HNRNPC levels have been associated with changes in alternative splicing. Therefore, we performed a meta-analysis on published RNA-seq datasets of three different cell lines to identify a ubiquitous HNRNPC-dependent signature of alternative spliced exons. The identified signature was not only confirmed in fibroblasts obtained from an affected individual but also showed a significant enrichment for genes associated with intellectual disability. Hence, we assessed the effect of decreased and increased levels of HNRNPC on neuronal arborization and neuronal migration and found that either condition affects neuronal function. Taken together, our data indicate that HNRNPC haploinsufficiency affects alternative splicing of multiple intellectual disability-associated genes and that the developing brain is sensitive to aberrant levels of HNRNPC. Hence, our data strongly support the inclusion of HNRNPC to the family of HNRNP-related neurodevelopmental disorders. [Display omitted] We identified genetic variants of HNRNPC in 13 individuals with intellectual disability and global developmental delay. Through a meta-analysis of multiple cell types, we found that loss of HNRNPC affects alternative splicing, in particular of intellectual disability-associated genes. In vivo assays confirmed that neurodevelopment was affected by aberrant HNRNPC levels

Genetic influences on schizophrenia and subcortical brain volumes:Large-scale proof of concept

Schizophrenia is a devastating psychiatric illness with high heritability. Brain structure and function differ, on average, between people with schizophrenia and healthy individuals. As common genetic associations are emerging for both schizophrenia and brain imaging phenotypes, we can now use genome-wide data to investigate genetic overlap. Here we integrated results from common variant studies of schizophrenia (33,636 cases, 43,008 controls) and volumes of several (mainly subcortical) brain structures (11,840 subjects). We did not find evidence of genetic overlap between schizophrenia risk and subcortical volume measures either at the level of common variant genetic architecture or for single genetic markers. These results provide a proof of concept (albeit based on a limited set of structural brain measures) and define a roadmap for future studies investigating the genetic covariance between structural or functional brain phenotypes and risk for psychiatric disorders

Analysis of Outcomes in Ischemic vs Nonischemic Cardiomyopathy in Patients With Atrial Fibrillation A Report From the GARFIELD-AF Registry

IMPORTANCE Congestive heart failure (CHF) is commonly associated with nonvalvular atrial fibrillation (AF), and their combination may affect treatment strategies and outcomes