Bragg Spectroscopy of ultracold atoms loaded in an optical lattice

We study Bragg spectroscopy of ultra-cold atoms in one-dimensional optical lattices as a method for probing the excitation spectrum in the Mott insulator phase, in particular the one particle-hole excitation band. Within the framework of perturbation theory we obtain an analytical expression for the dynamic structure factor $S(q,\omega)$ and use it to calculate the imparted energy which has shown to be a relevant observable in recent experiments. We test the accuracy of our approximations by comparing them with numerically exact solutions of the Bose-Hubbard model in restricted cases and establish the limits of validity of our linear response analysis. Finally we show that when the system is deep in the Mott insulator regime, its response to the Bragg perturbation is temperature dependent. We suggest that this dependence might be used as a tool to probe temperatures of order of the Mott gap.Comment: 4 pages, 3 figure

Scalable register initialization for quantum computing in an optical lattice

The Mott insulator state created by loading an atomic Bose-Einstein condensate (BEC) into an optical lattice may be used as a means to prepare a register of atomic qubits in a quantum computer. Such architecture requires a lattice commensurately filled with atoms, which corresponds to the insulator state only in the limit of zero inter-well tunneling. We show that a lattice with spatial inhomogeneity created by a quadratic magnetic trapping potential can be used to isolate a subspace in the center which is impervious to hole-hoping. Components of the wavefunction with more than one atom in any well can be projected out by selective measurement on a molecular photo-associative transition. Maintaining the molecular coupling induces a quantum Zeno effect that can sustain a commensurately filled register for the duration of a quantum computation.Comment: 5 pages, 2 figure

Sound production in the Meagre, Argyrosomus regius (Asso, 1801): intraspecific variability associated with size, sex and context

Many fish taxa produce sound in voluntary and in disturbance contexts but information on the full acoustic repertoire is lacking for most species. Yet, this knowledge is critical to enable monitoring fish populations in nature through acoustic monitoring.Portuguese Foundation for Science and Technology: PTDC/BIA-BMA/30517/2017; SFRH/BD/115562/2016; UID/MAR/04292/2019; UID/BIA/00329/2019; PTDC/BIA-BMA/29662/2017.info:eu-repo/semantics/publishedVersio

Environmental risk assessment in a contaminated estuary: an integrated weight of evidence approach as a decision support tool

Environmental risk assessment of complex ecosystems such as estuaries is a challenge, where innovative and integrated approaches are needed. The present work aimed at developing an innovative integrative methodology to evaluate in an impacted estuary (the Sado, in Portugal, was taken as case study), the adverse effects onto both ecosystem and human health. For the purpose, new standardized lines of evidence based on multiple quantitative data were integrated into a weight of evidence according to a best expert judgment approach. The best professional judgment for a weight of evidence approach in the present study was based on the following lines of evidence: i) human contamination pathways; ii) human health effects: chronic disease; iii) human health effects: reproductive health; iv) human health effects: health care; v) human exposure through consumption of local agriculture produce; vi) exposure to contaminated of water wells and agriculture soils; vii) contamination of the estuarine sedimentary environment (metal and organic contaminants); viii) effects on benthic organisms with commercial value; and ix) genotoxic potential of sediments. Each line of evidence was then ordinally ranked by levels of ecological or human health risk, according to a tabular decision matrix and expert judgment. Fifteen experts scored two fishing areas of the Sado estuary and a control estuarine area, in a scale of increasing environmental risk and management actions to be taken. The integrated assessment allowed concluding that the estuary should not be regarded as impacted by a specific toxicant, such as metals and organic compounds hitherto measured, but by the cumulative risk of a complex mixture of contaminants. The proven adverse effects on species with commercial value may be used to witness the environmental quality of the estuarine ecosystem. This method argues in favor of expert judgment and qualitative assessment as a decision support tool to the integrative management of estuaries. Namely it allows communicating environmental risk and proposing mitigation measures to local authorities and population under a holistic perspective as an alternative to narrow single line of evidence approaches, which is mandatory to understand cause and effect relationships in complex areas like estuaries.info:eu-repo/semantics/publishedVersio

Genomic diversity of Oenococcus oeni from different winemaking regions of Portugal

Oenococcus oeni is an alcohol-tolerant, acidophilic lactic acid bacterium that plays an important role in the elaboration of wine. It is often added as a starter culture to carry out malolactic conversion. Given the economic importance of this reaction, the taxonomic structure of this species has been studied in detail. In the present work, phenotypic and molecular approaches were used to identify 121 lactic acid bacteria strains isolated from the wines of three winemaking regions of Portugal. The strains were differentiated at the genomic level by M13-PCR fingerprinting. Twenty-seven genomic clusters represented by two or more isolates and 21 single-member clusters, based on an 85% similarity level, were recognized by hierarchic numerical analysis. M13-PCR fingerprinting patterns revealed a high level of intraspecific genomic diversity in O. oeni. Moreover, this diversity could be partitioned according to the geographical origin of the isolates. Thus, M13-PCR fingerprint analysis may be an appropriate methodology to study the O. oeni ecology of wine during malolactic fermentation as well as to trace new malolactic starter cultures and evaluate their dominance over the native microbiota

Prediction of road accident severity using the ordered probit model

The ordered probit model is used to examine the contribution of several factors to the injury severity faced by motor-vehicle occupants involved in road accidents. The estimated results suggest that motor-vehicle occupants travelling in light-vehicles, at two-way roads, and on dry road surfaces tend to suffer more severe injuries than those who travel in heavy-vehicles, at one-way roads, and on wet road surfaces. Additionally, the driver's seat is clearly the safest seating position, urban areas seem to originate less serious accidents than rural areas, and women tend to be more likely to suffer serious or fatal injuries than men

Quantum Many-Body Dynamics of Coupled Double-Well Superlattices

We propose a method for controllable generation of non-local entangled pairs using spinor atoms loaded in an optical superlattice. Our scheme iteratively increases the distance between entangled atoms by controlling the coupling between the double wells. When implemented in a finite linear chain of 2N atoms, it creates a triplet valence bond state with large persistency of entanglement (of the order of N). We also study the non-equilibrium dynamics of the one-dimensional ferromagnetic Heisenberg Hamiltonian and show that the time evolution of a state of decoupled triplets on each double well leads to the formation of a highly entangled state where short-distance antiferromagnetic correlations coexist with longer-distance ferromagnetic ones. We present methods for detection and characterization of the various dynamically generated states. These ideas are a step forward towards the use of atoms trapped by light as quantum information processors and quantum simulators.Comment: 13 pages, 10 figures, references adde

An Electrochemical Outlook on Tamoxifen Biotransformation: Current and Future Prospects

Tamoxifen is a nonsteroidal antiestrogen that is currently and widely used in the treatment of breast cancer in all of its stages, in adjuvant therapy as a long-term suppressant of tumor recurrence and also as a chemopreventive agent in women that are in high risk of developing this type of estrogen-dependent cancer. From a toxicological and (bio)analytical point of view the knowledge of the metabolic pathways of a drug is found to be extremely important. So, in the present work the most important tamoxifen biotransformation steps were reviewed in the light of recent pharmacological data. This overview also includes the current controversy concerning tamoxifen DNA-damaging (genotoxic) versus non-genotoxic mechanisms. A special focus will be given to the putative application of electrochemical methods as a modern and reliable analytical tool for determination of tamoxifen and its metabolites. Moreover, the potential of DNA electrochemical sensors for detection of structural damage to DNA as a basis for toxicity screening is highlighted. Future prospects looking for the importance of developing new analytical methodologies are also discussed.info:eu-repo/semantics/publishedVersio

Geographic variation in phenology behavior and response to drought of cork oak populations is crucial to cope with climate change

Cork oak is widely distributed in the Western Mediterranean region, spanning a range of different environmental conditions, and frequently dominating open woodlands of high conservation and socioeconomic value. Cork oak woodlands spread-out for over 715000 ha in Portugal, covering 21% of the national forested area and 30% of the world’s cork producing area. Cork oak is well adapted to the seasonal drought of Mediterranean climate, following several decades of warming- up and frequent drought years. However, since the 70's, maximum and minimum temperatures have risen in Portugal about 0.5 ºC each decade, corresponding to twice the average world temperature increment. In addition, since longer, more frequent, and more intense drought periods are expected, stress caused by the expansion of arid and semi-arid climate throughout the country will affect the species distribution. Consequently, not only established stands may be prone to tree mortality, but also the current reforestation effort may be jeopardized by low survival rates attributed to the use of unsuitable genetic material. It is expected that, through genetic adaptation and/or phenotypic plasticity, cork oak populations may have developed significant differences in fitness and the traits related to it. In this context, provenance trials are the best resource of material to assess the variability between and within populations from seed sources sampled in a wide range of locations (stands) covering the geographical distribution of the species. This will enable to assess the levels and patterns of genetic variation for growth and traits determining adaptation to a specific environment, hence providing crucial information to select appropriate seed sources for planting, as well as to develop sustainable breeding and gene conservation programs. In 1998, multi-site provenance trials were established at three locations in Portugal, as a part of the “European Network for the Evaluation of Genetic Resources of Cork Oak for Appropriate Use in Breeding and Gene Conservation Strategies”. Results from these field trials at 7 years from planting pointed out that seed origin must be considered in reforestation programs, since survival, growth and adaptive traits (phenology, water use efficiency - wue) showed significant differences among populations. Responses to drought (a major limitation to cork oak regeneration) of four contrasting populations, selected according to their field performance for growth, phenology and wue, were further studied under controlled-environment conditions where drought stress was induced. In addition, morphological (total height, root/shoot biomass), physiological (wue, water potential, relative water content and gas exchange) and biochemical (maximum quantum yield of PSII) traits were assessed in 6-month seedlings produced from acorns collected in the stands representing the four contrasting provenances. Results from the controlled experiment provided an indication that drought adaptation was mainly related to early stomatal closure and root investment, with these traits showing significant differences between the studied populations. We have also observed significant differences in growth rhythm, as well as dissimilar temporal drought responses, in the populations under study. In conclusion, both field trials and controlled environment showed consistent results and indicated an important influence of geographic origin on growth performance and wue.projeto PTDC/AGR-AAM/104364/200