On impact and volcanism across the Cretaceous-Paleogene boundary

The cause of the end-Cretaceous mass extinction is vigorously debated, owing to the occurrence of a very large bolide impact and flood basalt volcanism near the boundary. Disentangling their relative importance is complicated by uncertainty regarding kill mechanisms and the relative timing of volcanogenic outgassing, impact, and extinction. We used carbon cycle modeling and paleotemperature records to constrain the timing of volcanogenic outgassing. We found support for major outgassing beginning and ending distinctly before the impact, with only the impact coinciding with mass extinction and biologically amplified carbon cycle change. Our models show that these extinction-related carbon cycle changes would have allowed the ocean to absorb massive amounts of carbon dioxide, thus limiting the global warming otherwise expected from postextinction volcanism

Replication Data for: Experimentally determined trace element partition coefficients between hibonite, melilite, spinel, and silicate melts.

This article provides new data on mineral/melt partitioning in systems relevant to the evolution of chondrites, Calcium Aluminum-Rich Inclusions (CAI) in chondrites and related meteorites. The data set includes experimentally determined mineral/melt partition coefficients between hibonite (CaAl12O19), melilite (Ca2(Al,Mg)2SiO7), spinel (MgAl2O4) and silicate melts for a wide range of trace elements: Sc, Ti, V, Cr, Co, Ni, Cu, Zn, Ga, Ge, Rb, Sr, Y, Zr, Nb, Rh, Cs, Ba, La, Ce, r, Nd, Sm, Eu, Gd, Tb, Dy, Ho, Er, Tm, Yb, Lu, Hf, Ta, W, Pb, Th and U. The experiments were performed at high temperatures (1350 °C < T < 1550 °C) and ambient pressure. The experimental run products were analyzed using electron microprobe (EMPA) and laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS). The partition coefficients for 38 trace elements were calculated from the LA-ICP-MS data. TRR 170 no. 5

A sensitive and simple targeted proteomics approach to quantify transcription factor and membrane proteins of the unfolded protein response pathway in glioblastoma cells

Many cellular events are driven by changes in protein expression, measurable by mass spectrometry or antibody-based assays. However, using conventional technology, the analysis of transcription factor or membrane receptor expression is often limited by an insufficient sensitivity and specificity. To overcome this limitation, we have developed a high-resolution targeted proteomics strategy, which allows quantification down to the lower attomol range in a straightforward way without any prior enrichment or fractionation approaches. The method applies isotope-labeled peptide standards for quantification of the protein of interest. As proof of principle, we applied the improved workflow to proteins of the unfolded protein response (UPR), a signaling pathway of great clinical importance, and could for the first time detect and quantify all major UPR receptors, transducers and effectors that are not readily detectable via antibody-based-, SRM- or conventional PRM assays. As transcription and translation is central to the regulation of UPR, quantification and determination of protein copy numbers in the cell is important for our understanding of the signaling process as well as how pharmacologic modulation of these pathways impacts on the signaling. These questions can be answered using our newly established workflow as exemplified in an experiment using UPR perturbation in a glioblastoma cell lines

Finnish and Swedish law on mining in light of collaborative governance

Today, access to minerals and the development of mines are both closely linked to combating climate change, enabling developments in transitions of energy and transportation systems. New mineral extraction projects are highly contested, and the mining sector has been struggling with both environmental and social governance, as well as the legitimacy of mineral exploration and mining activities. Collaborative governance aims to address these challenges by suggesting deeper, more interactive modes of engagement for planning and decision-making procedures. It calls for co-operative relations and deliberative approaches to environmental governance. This article comparatively explores relationships between collaborative governance and legislation on mining in Finland and Sweden. It argues that Finnish and Swedish mining-related laws and, in particular, land use planning and environmental impact assessment laws, have collaborative objectives and support the use of interactive and co-operative planning modes. However, corresponding legislation does not require broad consensus on critical decisions, and format and quality of collaborative processes can significantly differ case-by-case within the minimum legal requirements. This article identifies timing of statutory participation as a key factor for successful collaborative practices, and suggests changes to mining laws in this regard. It cautions that a unilateral focus on procedure means a risk of disregarding the close interplay between the procedural and substantive sides of regulatory frameworks – sides that are crucial for successful outcomes of collaborative processes. Validerad;2021;Nivå 1;2021-02-22 (alebob);Finansiär: Academy of Finland (313013+, 313304, 333368)</p

On impact and volcanism across the Cretaceous-Paleogene boundary.

The cause of the end-Cretaceous mass extinction is vigorously debated, owing to the occurrence of a very large bolide impact and flood basalt volcanism near the boundary. Disentangling their relative importance is complicated by uncertainty regarding kill mechanisms and the relative timing of volcanogenic outgassing, impact, and extinction. We used carbon cycle modeling and paleotemperature records to constrain the timing of volcanogenic outgassing. We found support for major outgassing beginning and ending distinctly before the impact, with only the impact coinciding with mass extinction and biologically amplified carbon cycle change. Our models show that these extinction-related carbon cycle changes would have allowed the ocean to absorb massive amounts of carbon dioxide, thus limiting the global warming otherwise expected from postextinction volcanism

Database search engines : paradigms, challenges and solutions

The first step in identifying proteins from mass spectrometry based shotgun proteomics data is to infer peptides from tandem mass spectra, a task generally achieved using database search engines. In this chapter, the basic principles of database search engines are introduced with a focus on open source software, and the use of database search engines is demonstrated using the freely available SearchGUI interface. This chapter also discusses how to tackle general issues related to sequence database searching and shows how to minimize their impact