Ocean Acidification: An Emerging Threat to our Marine Environment

This report aims to provide a concise overview of the present state of scientific knowledge of ocean acidification and its likely impacts on organisms and ocean ecosystems. This is particularly relevant in the context of the possible implications and ramifications of ocean acidification for Irish marine areas. Discussion on how mankind’s CO2 emissions are changing ocean chemistry; consequences of ocean acidification; ocean acidification as an emerging cause for concern; international policy drivers, strategies and necessary actions; and research and information needs are presented. Ireland’s marine location and extensive marine resources in our shelf seas, Atlantic waters and habitats of the west coast mean we are uniquely positioned to contribute to international scientific efforts to monitor and understand the impacts of ocean acidification. Monitoring and research of key biological, chemical and physical factors in these regions will allow us to determine the current status of Irish Marine waters, the rate of change in the carbonate cycle and the influence of this change on natural communities and ecosystems. The Marine Institute’s SSTI funded Sea Change programme includes a Rapid Climate Change programme. Under this, a two year collaborative project between NUI Galway and Marine Institute ‘Impacts of increased atmospheric CO2 on ocean chemistry and ecosystems’ is developing capabilities for measuring pCO2 fluxes, inorganic carbon chemistry and pH and is initiating baseline measurements of these parameters in coastal and offshore waters. This report summarises the issues and state of knowledge and communicates ongoing monitoring and research needs into acidification.Funder: Marine Institut

Benthic fluxes of oxygen and nutrients in sublittoral fine sands in a north-western Mediterranean coastal area

[EN] Traditionally, benthic metabolism in sublittoral permeable sands have not been widely studied, although these sands can have a direct and transcendental impact in coastal ecosystems. This study aims to determine oxygen and nutrient fluxes at the sediment-water interface and the study of possible interactions among environmental variables and the benthic metabolism in well-sorted fine sands. Eight sampling campaigns were carried out over the annual cycle in the eastern coast of Spain (NW Mediterranean) at 9 m depth station with permeable bottoms. Water column and sediment samples were collected in order to determine physico-chemical and biological variables. Moreover, in situ incubations were performed to estimate the exchange of dissolved solutes in the sediment-water interface using dark and light benthic chambers. Biochemical compounds at the sediment surface ranged between 160 and 744 mu g g(-1) for proteins, 296 and 702 mu g g(-1) for carbohydrates, and between 327 and 1224 [mu g C g(-1) for biopolymeric carbon. Chloroplastic pigment equivalents in sediments were mainly composed by chlorophyll a (1.81-2.89 mu g g(-1)). These sedimentary organic descriptors indicated oligotrophic conditions according to the biochemical approach used. In this sense, the most abundant species in the macrobenthic community were sensitive to organic enrichment. In dark conditions, benthic fluxes behaved as a sink of oxygen and a source of nutrients. Oxygen fluxes (between -26,610 and -10,635 mu mol m(-2) d(-1)) were related with labile organic fraction (r= -0.86, p < 0.01 with biopolymeric carbon; r= -0.91, p < 0.01 with chloroplastic pigment equivalents). Daily fluxes of dissolved oxygen, that were obtained by adding light and dark fluxes, were only positive in spring campaigns (6966 mu mol m(-2) d(-1)) owing to the highest incident irradiance levels (r=0.98, p < 0.01) that stimulate microphytobenthic primary production. Microphytobenthos played an important role on benthic metabolism and was the main primary producer in this coastal ecosystem. However, an average annual uptake of 31 mmol m-2 d(-1) of oxygen and a release of DIN and Si(OH)(4) (329 and 68 mmol m(-2) d(-1) respectively) were estimated in these bottoms, which means heterotrophic conditions. (C) 2015 Elsevier Ltd. All rights reserved.We are grateful for the valuable comments of anonymous reviewers on previous version of the manuscript. This research was supported by the Conselleria d'Educacio (Generalitat Valenciana).Sospedra, J.; Falco, S.; Morata, T.; Gadea, I.; Rodilla, M. (2015). Benthic fluxes of oxygen and nutrients in sublittoral fine sands in a north-western Mediterranean coastal area. Continental Shelf Research. 97:32-42. doi:10.1016/j.csr.2015.02.002S32429

Microphytobenthos of Arctic Kongsfjorden (Svalbard, Norway): biomass and potential primary production along the shore line

During summer 2007, Arctic microphytobenthic potential primary production was measured at several stations around the coastline of Kongsfjorden (Svalbard, Norway) at ?5 m water depth and at two stations at five different water depths (5, 10, 15, 20, 30 m). Oxygen planar optode sensor spots were used ex situ to determine oxygen exchange in the overlying water of intact sediment cores under controlled light (ca. 100 ?mol photons m?2 s?1) and temperature (2–4°C) conditions. Patches of microalgae (mainly diatoms) covering sandy sediments at water depths down to 30 m showed high biomass of up to 317 mg chl a m?2. In spite of increasing water depth, no significant trend in “photoautotrophic active biomass” (chl a, ratio living/dead cells, cell sizes) and, thus, in primary production was measured at both stations. All sites from ?5 to 30 m water depth exhibited variable rates of net production from ?19 to +40 mg O2 m?2 h?1 (?168 to +360 mg C m?2 day?1) and gross production of about 2–62 mg O2 m?2 h?1 (17–554 mg C m?2 day?1), which is comparable to other polar as well as temperate regions. No relation between photoautotrophic biomass and gross/net production values was found. Microphytobenthos demonstrated significant rates of primary production that is comparable to pelagic production of Kongsfjorden and, hence, emphasised the importance as C source for the zoobenthos

Incidental nutrient transfers: Assessing critical times in agricultural catchments using high-resolution data

AbstractManaging incidental losses associated with liquid slurry applications during closed periods has significant cost and policy implications and the environmental data required to review such a measure are difficult to capture due to storm dependencies. Over four years (2010–2014) in five intensive agricultural catchments, this study used high-resolution total and total reactive phosphorus (TP and TRP), total oxidised nitrogen (TON) and suspended sediment (SS) concentrations with river discharge data to investigate the magnitude and timing of nutrient losses. A large dataset of storm events (defined as 90th percentile discharges), and associated flow-weighted mean (FWM) nutrient concentrations and TP/SS ratios, was used to indicate when losses were indicative of residual or incidental nutrient transfers. The beginning of the slurry closed period was reflective of incidental and residual transfers with high storm FWM P (TP and TRP) concentrations, with some catchments also showing elevated storm TP:SS ratios. This pattern diminished at the end of the closed period in all catchments. Total oxidised N behaved similarly to P during storms in the poorly drained catchments and revealed a long lag time in other catchments. Low storm FWM P concentrations and TP:SS ratios during the weeks following the closed period suggests that nutrients either weren't applied during this time (best times chosen) or that they were applied to less risky areas (best places chosen). For other periods such as late autumn and during wet summers, where storm FWM P concentrations and TP:SS ratios were high, it is recommended that an augmentation of farmer knowledge of soil drainage characteristics with local and detailed current and forecast soil moisture conditions will help to strengthen existing regulatory frameworks to avoid storm driven incidental nutrient transfers

Living on Cold Substrata: New Insights and Approaches in the Study of Microphytobenthos Ecophysiology and Ecology in Kongsfjorden

Organisms in shallow waters at high latitudes are under pressure due to climate change. These areas are typically inhabited by microphytobenthos (MPB) communities, composed mainly of diatoms. Only sparse information is available on the ecophysiology and acclimation processes within MPBs from Arctic regions. The physico-chemical environment and the ecology and ecophysiology of benthic diatoms in Kongsfjorden (Svalbard, Norway) are addressed in this review. MPB biofilms cover extensive areas of sediment. They show high rates of primary production, stabilise sediment surfaces against erosion under hydrodynamic forces,and affect the exchange of oxygen and nutrients across the sediment-water interface. Additionally, this phototrophic community represents a key component in the functioning of the Kongsfjorden trophic web, particularly as a major food source for benthic suspension- or deposit-feeders. MPB in Kongsfjorden is confronted with pronounced seasonal variations in solar radiation, low temperatures, and hyposaline (meltwater) conditions in summer, as well as long periods of ice and snow cover in winter. From the few data available, it seems that these organisms can easily cope with these environmental extremes. The underlying physiological mechanisms that allow growth and photosynthesis to continue under widely varying abiotic parameters, along with vertical migration and heterotrophy, and biochemical features such as a pronounced fatty-acid metabolism and silicate incorporation are discussed. Existing gaps in our knowledge of benthic diatoms in Kongsfjorden, such as the chemical ecology of biotic interactions, need to be filled. In addition, since many of the underlying molecular acclimation mechanisms are poorly understood, modern approaches based on transcriptomics, proteomics, and/or metabolomics, in conjunction with cell biological and biochemical techniques, are urgently needed. Climate change models for the Arctic predict other multifactorial stressors, such as an increase in precipitation and permafrost thawing, with consequences for the shallow-water regions. Both precipitation and permafrost thawing are likely to increase nutrient-enriched, turbid freshwater runoff and may locally counteract the expected increase in coastal radiation availability. So far, complex interactions among factors, as well as the full genetic diversity and physiological plasticity of Arctic benthic diatoms, have only rarely been considered. The limited existing information is described and discussed in this review