Constitutive expression of clathrin hub hinders elicitor-induced clathrin-mediated endocytosis and defense gene expression in plant cells

AbstractEndocytosis has been recently implicated in the signaling network associated with the recognition of microbes by plants. In a previous study, we showed that the elicitor cryptogein was able to induce clathrin-mediated endocytosis (CME) in tobacco suspension cells. Herein, we investigate further the induced CME by means of a GFP-tagged clathrin light chain and a CME inhibitor, the hub domain of clathrin heavy chain. Hub constitutive expression does affect neither cell growth nor constitutive endocytosis but abolishes cryptogein-induced CME. Such an inhibition has no impact on early events in the cryptogein signaling pathway but reduces the expression of defense-associated genes

Ionized nebulae surrounding brightest cluster galaxies

We present IFU observations of six emission-line nebulae that surround the central galaxy of cool core clusters. Qualitatively similar nebulae are observed in cool core clusters even when the dynamics and possibly formation and excitation source are different. Evidence for a nearby secondary galaxy disturbing a nebula, as well as AGN and starburst driven outflows are presented as possible formation mechanisms. One nebula has a rotation velocity of the same amplitude as the underlying molecular reservoir, which implies that the excitation or formation of a nebula does not require any disturbance of the molecular reservoir within the central galaxy. Bulk flows and velocity shears of a few hundred km/s are seen across all nebulae. The majority lack any ordered rotation, their configurations are not stable so the nebulae must be constantly reshaping, dispersing and reforming. The dimmer nebulae are co-spatial with dust features whilst the more luminous are not. Significant variation in the ionization state of the gas is seen in all nebulae through the non-uniform [NII]/H_alpha ratio. There is no correlation between the line ratio and H_alpha surface brightness, but regions with excess blue or UV light have lower line ratios. This implies that UV from massive, young stars act in combination with an underlying heating source that produces the observed low-ionization spectra.Comment: 12 pages, accepted for publication in MNRA

The XMM-Newton Wide-Field Survey in the COSMOS field (XMM-COSMOS): demography and multiwavelength properties of obscured and unobscured luminous AGN

We report the final optical identifications of the medium-depth (~60 ksec), contiguous (2 deg^2) XMM-Newton survey of the COSMOS field. XMM-Newton has detected ~800 X-ray sources down to limiting fluxes of ~5x10^{-16}, ~3x10^{-15}, and ~7x10^{-15} erg/cm2/s in the 0.5-2 keV, 2-10 keV and 5-10 keV bands, respectively. The work is complemented by an extensive collection of multi-wavelength data from 24 micron to UV, available from the COSMOS survey, for each of the X-ray sources, including spectroscopic redshifts for ~50% of the sample, and high-quality photometric redshifts for the rest. The XMM and multiwavelength flux limits are well matched: 1760 (98%) of the X-ray sources have optical counterparts, 1711 (~95%) have IRAC counterparts, and 1394 (~78%) have MIPS 24micron detections. Thanks to the redshift completeness (almost 100%) we were able to constrain the high-luminosity tail of the X-ray luminosity function confirming that the peak of the number density of logL_X>44.5 AGN is at z~2. Spectroscopically-identified obscured and unobscured AGN, as well as normal and starforming galaxies, present well-defined optical and infrared properties. We devised a robust method to identify a sample of ~150 high redshift (z>1), obscured AGN candidates for which optical spectroscopy is not available. We were able to determine that the fraction of the obscured AGN population at the highest (L_X>10^{44} erg s^{-1}) X-ray luminosity is ~15-30% when selection effects are taken into account, providing an important observational constraint for X-ray background synthesis. We studied in detail the optical spectrum and the overall spectral energy distribution of a prototypical Type 2 QSO, caught in a stage transitioning from being starburst dominated to AGN dominated, which was possible to isolate only thanks to the combination of X-ray and infrared observations.Comment: ApJ, in press. 59 pages, 14 figures, 2 Tables. A few typos corrected and a reference added. Table 2 is also available at http://www.mpe.mpg.de/XMMCosmos/xmm53_release ; a version of the paper in ApJ format (27 pages) is available at http://www.mpe.mpg.de/XMMCosmos/xmm53_release/brusa_xmmcosmos_optid.pd

Acclimation to short-term low temperatures in two Eucalyptus globulus clones with contrasting drought resistance

We tested the hypothesis that Eucalyptus globulus Labill. genotypes that are more resistant to dry environments might also exhibit higher cold tolerances than drought-sensitive plants. The effect of low temperatures was evaluated in acclimated and unacclimated ramets of a drought-resistant clone (CN5) and a drought-sensitive clone (ST51) of E. globulus. We studied the plants’ response via leaf gas exchanges, leaf water and osmotic potentials, concentrations of soluble sugars, several antioxidant enzymes and leaf electrolyte leakage. Progressively lowering air temperatures (from 24/16 to 10/ 2 C, day/night) led to acclimation of both clones. Acclimated ramets exhibited higher photosynthetic rates, stomatal conductances and lower membrane relative injuries when compared to unacclimated ramets. Moreover, low temperatures led to significant increases of soluble sugars and antioxidant enzymes activity (glutathione reductase, ascorbate peroxidase and superoxide dismutases) of both clones in comparison to plants grown at control temperature (24/16 C). On the other hand, none of the clones, either acclimated or not, exhibited signs of photoinhibition under low temperatures and moderate light. The main differences in the responses to low temperatures between the two clones resulted mainly from differences in carbon metabolism, including a higher accumulation of soluble sugars in the drought-resistant clone CN5 as well as a higher capacity for osmotic regulation, as compared to the droughtsensitive clone ST51. Although membrane injury data suggested that both clones had the same inherent freezing tolerance before and after cold acclimation, the results also support the hypothesis that the droughtresistant clone had a greater cold tolerance at intermediate levels of acclimation than the drought-sensitive clone. A higher capacity to acclimate in a short period can allow a clone to maintain an undamaged leaf surface area along sudden frost events, increasing growt

Monitoring egg fertility, embryonic morbidity, and mortality in an oviparous elasmobranch using ultrasonography

Ultrasonography is widely used to monitor pregnancy in viviparous species, but it is underutilized as a tool to characterize embryonic development in oviparous species. Currently, a multi-institutional effort is underway to re-wild the endangered zebra shark (Stegostoma tigrinum) to locations where this species was previously extirpated by leveraging the reproductive efforts of aquarium sharks as a source of brood stock. Zebra sharks are oviparous and fecund, but a large percentage of their yolked eggs do not result in hatchlings. Therefore, ultrasonography represents a potential tool for distinguishing fertile eggs with developing embryos from degrading eggs, and to diagnose changes in early embryonic development predictive of poor outcomes. The objectives of the current study were to use ultrasonography to assess egg fertility, monitor early embryonic development, and identify morphological indicators that may be predictive of early embryonic mortality. Freshly laid eggs from four female zebra sharks were collected and inventoried daily at Aquarium of the Pacific. Eggs were incubated undisturbed for 2 to 4 weeks and subsequently examined weekly via ultrasound to assess fertility and monitor embryo development. Among 120 fertile eggs, embryos were identified as early as 8 days post-oviposition, with average (±SD) time to first observation at 30 ± 7 days. Morphological and behavioral abnormalities were observed for most embryos (n = 84, 70%) as early as 16 days and up to 95 days post-oviposition. Common abnormalities included: bent or curled tails, vesicle(s) at the base of the yolk stalk, and slow or weak movement. Only one embryo survived to hatch during the study and was genetically-confirmed parthenogenetic, suggesting hatching success for parthenotes is low (<1%). Ultrasonography was demonstrated to be an effective and non-invasive method to determine egg fertility, identify embryos with developmental abnormalities, and monitor embryo growth

Precision photometric redshift calibration for galaxy-galaxy weak lensing

Accurate photometric redshifts are among the key requirements for precision weak lensing measurements. Both the large size of the Sloan Digital Sky Survey (SDSS) and the existence of large spectroscopic redshift samples that are flux-limited beyond its depth have made it the optimal data source for developing methods to properly calibrate photometric redshifts for lensing. Here, we focus on galaxy-galaxy lensing in a survey with spectroscopic lens redshifts, as in the SDSS. We develop statistics that quantify the effect of source redshift errors on the lensing calibration and on the weighting scheme, and show how they can be used in the presence of redshift failure and sampling variance. We then demonstrate their use with 2838 source galaxies with spectroscopy from DEEP2 and zCOSMOS, evaluating several public photometric redshift algorithms, in two cases including a full p(z) for each object, and find lensing calibration biases as low as <1 per cent (due to fortuitous cancellation of two types of bias) or as high as 20 per cent for methods in active use (despite the small mean photoz bias of these algorithms). Our work demonstrates that lensing-specific statistics must be used to reliably calibrate the lensing signal, due to asymmetric effects of (frequently non-Gaussian) photoz errors. We also demonstrate that large-scale structure (LSS) can strongly impact the photoz calibration and its error estimation, due to a correlation between the LSS and the photoz errors, and argue that at least two independent degree-scale spectroscopic samples are needed to suppress its effects. Given the size of our spectroscopic sample, we can reduce the galaxy-galaxy lensing calibration error well below current SDSS statistical error

Precision photometric redshift calibration for galaxy–galaxy weak lensing

Accurate photometric redshifts are among the key requirements for precision weak lensing measurements. Both the large size of the Sloan Digital Sky Survey (SDSS) and the existence of large spectroscopic redshift samples that are flux-limited beyond its depth have made it the optimal data source for developing methods to properly calibrate photometric redshifts for lensing. Here, we focus on galaxy–galaxy lensing in a survey with spectroscopic lens redshifts, as in the SDSS. We develop statistics that quantify the effect of source redshift errors on the lensing calibration and on the weighting scheme, and show how they can be used in the presence of redshift failure and sampling variance. We then demonstrate their use with 2838 source galaxies with spectroscopy from DEEP2 and zCOSMOS, evaluating several public photometric redshift algorithms, in two cases including a full p(z) for each object, and find lensing calibration biases as low as <1 per cent (due to fortuitous cancellation of two types of bias) or as high as 20 per cent for methods in active use (despite the small mean photoz bias of these algorithms). Our work demonstrates that lensing-specific statistics must be used to reliably calibrate the lensing signal, due to asymmetric effects of (frequently non-Gaussian) photoz errors. We also demonstrate that large-scale structure (LSS) can strongly impact the photoz calibration and its error estimation, due to a correlation between the LSS and the photoz errors, and argue that at least two independent degree-scale spectroscopic samples are needed to suppress its effects. Given the size of our spectroscopic sample, we can reduce the galaxy–galaxy lensing calibration error well below current SDSS statistical errors