Optimal low-dispersion low-dissipation LBM schemes for computational aeroacoustics

Lattice Boltmzmann Methods (LBM) have been proved to be very effective methods for computational aeroacoustics (CAA), which have been used to capture the dynamics of weak acoustic fluctuations. In this paper, we propose a strategy to reduce the dispersive and disspative errors of the two-dimensional (2D) multi-relaxation-time lattice Boltzmann method (MRT-LBM). By presenting an effective algorithm, we obtain a uniform form of the linearized Navier-Stokes equations corresponding to the MRT-LBM in wave-number space. Using the matrix perturbation theory and the equivalent modified equation approach for finite difference methods, we propose a class of minimization problems to optimize the free-parameters in the MRT-LBM. We obtain this way a dispersion-relation-preserving LBM (DRP-LBM) to circumvent the minimized dispersion error of the MRT-LBM. The dissipation relation precision is also improved.And the stability of the MRT-LBM with the small bulk viscosity is guaranteed. Von Neuman analysis of the linearized MRT-LBM is performed to validate the optimized dispersion/dissipation relations considering monochromatic wave solutions. Meanwhile, dispersion and dissipation errors of the optimized MRT-LBM are quantitatively compared with the original MRT-LBM . Finally, some numerical simulations are carried out to assess the new optimized MRT-LBM schemes.Comment: 33 page

Towards higher order lattice Boltzmann schemes

In this contribution we extend the Taylor expansion method proposed previously by one of us and establish equivalent partial differential equations of DDH lattice Boltzmann scheme at an arbitrary order of accuracy. We derive formally the associated dynamical equations for classical thermal and linear fluid models in one to three space dimensions. We use this approach to adjust relaxation parameters in order to enforce fourth order accuracy for thermal model and diffusive relaxation modes of the Stokes problem. We apply the resulting scheme for numerical computation of associated eigenmodes and compare our results with analytical references

Total hip arthroplasty through the direct anterior approach with and without the use of a traction table: a matched-control, retrospective, single-surgeon study.

Hip surgeons performing total hip arthroplasty (THA) through the direct anterior approach (DAA) commonly use a traction table to facilitate exposure. Even though performing THA through DAA without a traction table could be technically more demanding, this technique offers the advantage of intraoperative leg length comparison. Therefore, this study aimed to compare clinical outcomes, complication rates, component positioning, and leg length discrepancy (LLD) after THA through the DAA performed with or without a traction table. A single-surgeon continuous series of 75 patients who underwent DAA THA performed with a traction table was matched for gender, age, and BMI with 75 patients who underwent DAA THA performed without a traction table (male, 62; female, 88, with an average age of 68 years old). Clinical and radiological outcomes, intra- and postoperative complications, and LLD were retrospectively assessed. No statistically significant difference was detected in surgical time, hospital stay, Harris Hip Score (HHS), complication rates, and implant positioning between the two groups. Leg length restoration was significantly more accurate in the group performed without a traction table (2.4 ± 2 mm vs. 3.7 ± 3.1 mm; p value ≤ 0.05). No LLD > 10 mm was reported in the group performed without a traction table, whereas two cases (2.7%) were reported in those performed with a traction table. Performing THA through DAA without a traction table was associated with a significantly more accurate leg length restoration without a significant increase in the rates of intra- and postoperative complications

Reconstructing past terrace fields in the Pyrenees: Insights into land management and settlement from the Bronze Age to the Early Modern era at Vilalta (1650 masl, Cerdagne, France)

© Trustees of Boston University 2015. The building of a solar power station at Thémis, at 1650 masl on the south-facing slope of the Carlit massif in the eastern Pyrenees, led to an archaeological evaluation from April-June 2009. This evaluation covered a surface of 10 ha that included a medieval village as well as the surrounding agricultural land in terraces. Non-destructive archaeological methods were used for the village. A detailed study of the 6 ha of terraces began with a fieldwalking survey, mapping every visible feature, followed by systematic trial trenches. Fifty-five trenches, 11 in the village and 44 in the fields, were opened. The stratigraphies were then compared with a series of 22 radiocarbon dates and eight relative dates provided by ceramic typologies. This combination of surface and buried evidence supported our preliminary hypothesis about the dynamics of the slope. The results suggest the existence of agrarian features beginning in the Bronze Age and reveal that the field patterns were frequently transformed, both in the Medieval and Early Modern periods. The transformations in the terrace fields after the village was abandoned are as interesting as those during occupation because, contrary to the idea of a fixed, unchanging landscape after the end of the Middle Ages, they challenge the idea that mountain zones are marginal spaces by nature, or were marginalized later.Peer Reviewe

On the Three-dimensional Central Moment Lattice Boltzmann Method

A three-dimensional (3D) lattice Boltzmann method based on central moments is derived. Two main elements are the local attractors in the collision term and the source terms representing the effect of external and/or self-consistent internal forces. For suitable choices of the orthogonal moment basis for the three-dimensional, twenty seven velocity (D3Q27), and, its subset, fifteen velocity (D3Q15) lattice models, attractors are expressed in terms of factorization of lower order moments as suggested in an earlier work; the corresponding source terms are specified to correctly influence lower order hydrodynamic fields, while avoiding aliasing effects for higher order moments. These are achieved by successively matching the corresponding continuous and discrete central moments at various orders, with the final expressions written in terms of raw moments via a transformation based on the binomial theorem. Furthermore, to alleviate the discrete effects with the source terms, they are treated to be temporally semi-implicit and second-order, with the implicitness subsequently removed by means of a transformation. As a result, the approach is frame-invariant by construction and its emergent dynamics describing fully 3D fluid motion in the presence of force fields is Galilean invariant. Numerical experiments for a set of benchmark problems demonstrate its accuracy.Comment: 55 pages, 8 figure

Prehistory of Transit Searches

Nowadays the more powerful method to detect extrasolar planets is the transit method. We review the planet transits which were anticipated, searched, and the first ones which were observed all through history. Indeed transits of planets in front of their star were first investigated and studied in the solar system. The first observations of sunspots were sometimes mistaken for transits of unknown planets. The first scientific observation and study of a transit in the solar system was the observation of Mercury transit by Pierre Gassendi in 1631. Because observations of Venus transits could give a way to determine the distance Sun-Earth, transits of Venus were overwhelmingly observed. Some objects which actually do not exist were searched by their hypothetical transits on the Sun, as some examples a Venus satellite and an infra-mercurial planet. We evoke the possibly first use of the hypothesis of an exoplanet transit to explain some periodic variations of the luminosity of a star, namely the star Algol, during the eighteen century. Then we review the predictions of detection of exoplanets by their transits, those predictions being sometimes ancient, and made by astronomers as well as popular science writers. However, these very interesting predictions were never published in peer-reviewed journals specialized in astronomical discoveries and results. A possible transit of the planet beta Pic b was observed in 1981. Shall we see another transit expected for the same planet during 2018? Today, some studies of transits which are connected to hypothetical extraterrestrial civilisations are published in astronomical refereed journals. Some studies which would be classified not long ago as science fiction are now considered as scientific ones.Comment: Submiited to Handbook of Exoplanets (Springer

The Gene expression Grade Index: a potential predictor of relapse for endocrine-treated breast cancer patients in the BIG 1–98 trial

<p>Abstract</p> <p>Background</p> <p>We have previously shown that the Gene expression Grade Index (GGI) was able to identify two subtypes of estrogen receptor (ER)-positive tumors that were associated with statistically distinct clinical outcomes in both untreated and tamoxifen-treated patients. Here, we aim to investigate the ability of the GGI to predict relapses in postmenopausal women who were treated with tamoxifen (T) or letrozole (L) within the BIG 1–98 trial.</p> <p>Methods</p> <p>We generated gene expression profiles (Affymetrix) and computed the GGI for a matched, case-control sample of patients enrolled in the BIG 1–98 trial from the two hospitals where frozen samples were available. All relapses (cases) were identified from patients randomized to receive monotherapy or from the switching treatment arms for whom relapse occurred before the switch. Each case was randomly matched with four controls based upon nodal status and treatment (T or L). The prognostic value of GGI was assessed as a continuous predictor and divided at the median. Predictive accuracy of GGI was estimated using time-dependent area under the curve (AUC) of the ROC curves.</p> <p>Results</p> <p>Frozen samples were analyzable for 48 patients (10 cases and 38 controls). Seven of the 10 cases had been assigned to receive L. Cases and controls were comparable with respect to menopausal and nodal status, local and chemotherapy, and HER2 positivity. Cases were slightly older than controls and had a larger proportion of large, poorly differentiated ER+/PgR- tumors. The GGI was significantly and linearly related to risk of relapse: each 10-unit increase in GGI resulted in an increase of approximately 11% in the hazard rate (p = 0.02). Within the subgroups of patients with node-positive disease or who were treated with L, the hazard of relapse was significantly greater for patients with GGI at or above the median. AUC reached a maximum of 78% at 27 months.</p> <p>Conclusion</p> <p>This analysis supports the GGI as a good predictor of relapse for ER-positive patients, even among patients who receive L. Validation of these results, in a larger series from BIG 1–98, is planned using the simplified GGI represented by a smaller set of genes and tested by qRT-PCR on paraffin-embedded tissues.</p

Efficient and accurate simulations of deformable particles immersed in a fluid using a combined immersed boundary lattice Boltzmann finite element method

The deformation of an initially spherical capsule, freely suspended in simple shear flow, can be computed analytically in the limit of small deformations [D. Barthes-Biesel, J. M. Rallison, The Time-Dependent Deformation of a Capsule Freely Suspended in a Linear Shear Flow, J. Fluid Mech. 113 (1981) 251-267]. Those analytic approximations are used to study the influence of the mesh tessellation method, the spatial resolution, and the discrete delta function of the immersed boundary method on the numerical results obtained by a coupled immersed boundary lattice Boltzmann finite element method. For the description of the capsule membrane, a finite element method and the Skalak constitutive model [R. Skalak et al., Strain Energy Function of Red Blood Cell Membranes, Biophys. J. 13 (1973) 245-264] have been employed. Our primary goal is the investigation of the presented model for small resolutions to provide a sound basis for efficient but accurate simulations of multiple deformable particles immersed in a fluid. We come to the conclusion that details of the membrane mesh, as tessellation method and resolution, play only a minor role. The hydrodynamic resolution, i.e., the width of the discrete delta function, can significantly influence the accuracy of the simulations. The discretization of the delta function introduces an artificial length scale, which effectively changes the radius and the deformability of the capsule. We discuss possibilities of reducing the computing time of simulations of deformable objects immersed in a fluid while maintaining high accuracy.Comment: 23 pages, 14 figures, 3 table

Cytoplasmic PML promotes TGF-β-associated epithelial–mesenchymal transition and invasion in prostate cancer

Epithelial–mesenchymal transition (EMT) is a key event that is involved in the invasion and dissemination of cancer cells. Although typically considered as having tumour-suppressive properties, transforming growth factor (TGF)-β signalling is altered during cancer and has been associated with the invasion of cancer cells and metastasis. In this study, we report a previously unknown role for the cytoplasmic promyelocytic leukaemia (cPML) tumour suppressor in TGF-β signalling-induced regulation of prostate cancer-associated EMT and invasion. We demonstrate that cPML promotes a mesenchymal phenotype and increases the invasiveness of prostate cancer cells. This event is associated with activation of TGF-β canonical signalling pathway through the induction of Sma and Mad related family 2 and 3 (SMAD2 and SMAD3) phosphorylation. Furthermore, the cytoplasmic localization of promyelocytic leukaemia (PML) is mediated by its nuclear export in a chromosomal maintenance 1 (CRM1)-dependent manner. This was clinically tested in prostate cancer tissue and shown that cytoplasmic PML and CRM1 co-expression correlates with reduced disease-specific survival. In summary, we provide evidence of dysfunctional TGF-β signalling occurring at an early stage in prostate cancer. We show that this disease pathway is mediated by cPML and CRM1 and results in a more aggressive cancer cell phenotype. We propose that the targeting of this pathway could be therapeutically exploited for clinical benefit