7,971 research outputs found
Post-TTM Rebound Pyrexia after Ischemia-Reperfusion Injury Results in Sterile Inflammation and Apoptosis in Cardiomyocytes
Introduction. Fever is frequently observed after acute ischemic events and is associated with poor outcome and higher mortality.
Targeted temperature management (TTM) is recommended for neuroprotection in comatose cardiac arrest survivors, but
pyrexia after rewarming is proven to be detrimental in clinical trials. However, the cellular mechanisms and kinetics of post-
TTM rebound pyrexia remain to be elucidated. Therefore, we investigated the effects of cooling and post-TTM pyrexia on the
inflammatory response and apoptosis in a cardiomyocyte ischemia-reperfusion (IR) injury model. Methods. HL-1
cardiomyocytes were divided into the following groups to investigate the effect of oxygen-glucose deprivation/reperfusion
(OGD/R), hypothermia (33.5°C), and pyrexia (40°C): normoxia controls maintained at 37°C and warmed to 40°C, OGD/R
groups maintained at 37°C and cooled to 33.5°C for 24 h with rewarming to 37°C, and OGD/R pyrexia groups further warmed
from 37 to 40°C. Caspase-3 and RBM3 were assessed by Western blot and TNF-α, IL-6, IL-1β, SOCS3, iNOS, and RBM3
transcriptions by RT-qPCR. Results. OGD-induced oxidative stress (iNOS) in cardiomyocytes was attenuated post-TTM by
cooling. Cytokine transcriptions were suppressed by OGD, while reperfusion induced significant TNF-α transcription that was
exacerbated by cooling. Significant inductions of TNF-α, IL-6, IL-1β, and SOCS3 were observed in noncooled, but not in cooled
and rewarmed, OGD/R-injured cardiomyocytes. Further warming to pyrexia induced a sterile inflammatory response in
OGD/R-injured groups that was attenuated by previous cooling, but no inflammation was observed in pyrexic normoxia groups.
Moreover, cytoprotective RBM3 expression was induced by cooling but suppressed by pyrexia, correlating with apoptotic
caspase-3 activation. Conclusion. Our findings show that maintaining a period of post-TTM “therapeutic normothermia” is
effective in preventing secondary apoptosis-driven myocardial cell death, thus minimizing the infarct area and further release of
mediators of the innate sterile inflammatory response after acute IR injury
Molecular epidemiology and antimicrobial resistance of Clostridioides difficile detected in chicken, soil and human samples from Zimbabwe
Background: Clostridioides difficile is the major cause of infectious nosocomial diarrhoea in industrialized nations. Data on the occurrence of C. difficile in Africa, ribotype (RT) distribution, antimicrobial susceptibility patterns and potential zoonotic transmission are scarce. Methods: 80 Zimbabwean C. difficile isolates from different sources (chicken [n = 30], soil [n = 21] and humans [n = 29]) were investigated using ribotyping, toxin gene detection, resistance testing, multiple-locus variable-number tandem repeat analysis (MLVA), and whole genome sequencing (WGS). Results: Among chicken isolates, the most common RTs were RT103 (6/30), RT025 (5/30) and RT070 (4/30). Within soil samples, RT025 and RT056 were most common (3/21 each). In contrast, the non-toxigenic RT084 was most frequently found in human isolates (4/29). Toxin genes were detected in only 19/29 human isolates. Susceptibility testing showed no resistance against metronidazole and vancomycin, and resistance against macrolides and rifampicin was scarce (3/80 and 2/80, respectively); however, 26/80 isolates showed moxifloxacin resistance. MLVA and WGS of strains with identical RTs stemming from different sources revealed clustering of RT025 and RT084 isolates from human und non-human samples. Conclusion: No "hypervirulent” strains were found. The detected clusters between human, chicken and soil isolates indicate ongoing transmission between humans and environmental sources and might point towards a zoonotic potential
Cooper pair sizes in 11Li and in superfluid nuclei: a puzzle?
We point out a strong influence of the pairing force on the size of the two
neutron Cooper pair in Li, and to a lesser extent also in He. It
seems that these are quite unique situations, since Cooper pair sizes of stable
superfluid nuclei are very little influenced by the intensity of pairing, as
recently reported. We explore the difference between Li and heavier
superfulid nuclei, and discuss reasons for the exceptional situation in
Li.Comment: 9 pages. To be published in J. of Phys. G special issue on Open
Problems in Nuclear Structure (OPeNST
Antigen-Specific vs. Neutralizing Antibodies Against Conditioned Media of Patients With Clostridioides difficile Infection: A Prospective Exploratory Study
The immunological response against Clostridioides difficile (C. difficile) is crucial for an
improved understanding of disease mechanisms and the development of novel therapeutic
strategies. From April 2014 to February 2015, adult patients with C. difficile infection (CDI)
were recruited, and the clinical course and treatment response were carefully monitored.
On day 1, 3, and 6 after diagnosis, patient plasma samples were screened for anti-GDH
(glutamate dehydrogenase), anti-TcdA, anti-TcdB, and anti-CWP84 (cell-wall protein 84)
antibodies by ELISA. Additionally, neutralization assays of toxins from conditioned media
of clinical isolates (RT010, RT014, and RT027) were performed. Most patients with CDI
(n=46) had antibodies against GDH (85%) and CWP84 (61%), but only few had antibodies
against TcdA (11%) and TcdB (28%). We found patients with neutralizing antibodies against
C. difficile toxins (conditioned media) produced by RT027 (26%). A subgroup of these
samples could neutralize both toxins from RT027 and RT014 [11%, (5/46)]; however, no
single sample neutralized only RT014. Overall, neutralizing antibody titers were low (≤1:16).
In a one week follow-up of acute infection, we never observed an early booster effect
with seroconversion or antibody increases, irrespective of disease severity. No correlation
was found between the presence of antigen-specific (ELISA) or neutralizing antibodies
and the clinical course of disease. Anti-TcdB but not anti-TcdA antibodies correlated with
the occurrence of neutralizing antibodies. In conclusion, natural antibody titers against C.
difficile toxins were absent or low and were not associated with disease severity. The
correlation between the anti-TcdB with toxin neutralization confirms the importance of
TcdB for virulence of CDI. Alternative sensitization strategies, e.g., through vaccine
development, are required to overcome the regular low-titer antibody production following
natural intestinal C. difficile exposure
The Effects of Targeted Temperature Management on Oxygen-Glucose Deprivation/Reperfusion-Induced Injury and DAMP Release in Murine Primary Cardiomyocytes
Introduction. Ischemia/Reperfusion (I/R) is a primary cause of myocardial injury after acute myocardial infarction resulting in the release of damage-associated molecular patterns (DAMPs), which can induce a sterile inflammatory response in the myocardial penumbra. Targeted temperature management (TTM) after I/R has been established for neuroprotection, but the cardioprotective effect remains to be elucidated. Therefore, we investigated the effect of TTM on cell viability, immune response, and DAMP release during oxygen-glucose deprivation/reperfusion (OGD/R) in murine primary cardiomyocytes. Methods. Primary cardiomyocytes from P1-3 mice were exposed to 2, 4, or 6 hours OGD (0.2% oxygen in medium without glucose and serum) followed by 6, 12, or 24 hours simulated reperfusion (21% oxygen in complete medium). TTM at 33.5°C was initiated intra-OGD, and a control group was maintained at 37°C normoxia. Necrosis was assessed by lactate dehydrogenase (LDH) release and apoptosis by caspase-3 activation. OGD-induced DAMP secretions were assessed by Western blotting. Inducible nitric oxide synthase (iNOS), cytokines, and antiapoptotic RBM3 and CIRBP gene expressions were measured by quantitative polymerase chain reaction. Results. Increasing duration of OGD resulted in a transition from apoptotic programmed cell death to necrosis, as observed by decreasing caspase-3 cleavage and increasing LDH release. DAMP release and iNOS expression correlated with increasing necrosis and were effectively attenuated by TTM initiated during OGD. Moreover, TTM induced expression of antiapoptotic RBM3 and CIRBP. Conclusion. TTM protects the myocardium by attenuating cardiomyocyte necrosis induced by OGD and caspase-3 activation, possibly via induction of antiapoptotic RBM3 and CIRBP expressions, during reperfusion. OGD induces increased Hsp70 and CIRBP releases, but HMGB-1 is the dominant mediator of inflammation secreted by cardiomyocytes after prolonged exposure. TTM has the potential to attenuate DAMP release
Discrimination between hypervirulent and non-hypervirulent ribotypes of Clostridioides difficile by MALDI-TOF mass spectrometry and machine learning
Hypervirulent ribotypes (HVRTs) of Clostridioides difcile such as ribotype (RT) 027 are epidemiologically important.
This study evaluated whether MALDI-TOF can distinguish between strains of HVRTs and non-HVRTs commonly found
in Europe. Obtained spectra of clinical C. difcile isolates (training set, 157 isolates) covering epidemiologically relevant
HVRTs and non-HVRTs found in Europe were used as an input for diferent machine learning (ML) models. Another 83
isolates were used as a validation set. Direct comparison of MALDI-TOF spectra obtained from HVRTs and non-HVRTs
did not allow to discriminate between these two groups, while using these spectra with certain ML models could diferentiate HVRTs from non-HVRTs with an accuracy >95% and allowed for a sub-clustering of three HVRT subgroups (RT027/
RT176, RT023, RT045/078/126/127). MALDI-TOF combined with ML represents a reliable tool for rapid identifcation of
major European HVRTs
Visual parameter optimisation for biomedical image processing
Background: Biomedical image processing methods require users to optimise input parameters to ensure high quality
output. This presents two challenges. First, it is difficult to optimise multiple input parameters for multiple
input images. Second, it is difficult to achieve an understanding of underlying algorithms, in particular, relationships
between input and output.
Results: We present a visualisation method that transforms users’ ability to understand algorithm behaviour by
integrating input and output, and by supporting exploration of their relationships. We discuss its application to a
colour deconvolution technique for stained histology images and show how it enabled a domain expert to
identify suitable parameter values for the deconvolution of two types of images, and metrics to quantify
deconvolution performance. It also enabled a breakthrough in understanding by invalidating an underlying
assumption about the algorithm.
Conclusions: The visualisation method presented here provides analysis capability for multiple inputs and outputs
in biomedical image processing that is not supported by previous analysis software. The analysis supported by our
method is not feasible with conventional trial-and-error approaches
Thermodynamic properties of a small superconducting grain
The reduced BCS Hamiltonian for a metallic grain with a finite number of
electrons is considered. The crossover between the ultrasmall regime, in which
the level spacing, , is larger than the bulk superconducting gap, ,
and the small regime, where , is investigated analytically
and numerically. The condensation energy, spin magnetization and tunneling peak
spectrum are calculated analytically in the ultrasmall regime, using an
approximation controlled by as small parameter, where is the
number of interacting electron pairs. The condensation energy in this regime is
perturbative in the coupling constant , and is proportional to . We find that also in a large regime with
, in which pairing correlations are already rather well developed,
the perturbative part of the condensation energy is larger than the singular,
BCS, part. The condition for the condensation energy to be well approximated by
the BCS result is found to be roughly . We show how
the condensation energy can, in principle, be extracted from a measurement of
the spin magnetization curve, and find a re-entrant susceptibility at zero
temperature as a function of magnetic field, which can serve as a sensitive
probe for the existence of superconducting correlations in ultrasmall grains.
Numerical results are presented which suggest that in the large limit the
1/N correction to the BCS result for the condensation energy is larger than
.Comment: 17 pages, 7 figures, Submitted to Phys. Rev.
Spectral evolution of Fermi/GBM short Gamma-Ray Bursts
We study the spectral evolution of 13 short duration Gamma Ray Bursts (GRBs)
detected by the Gamma Burst Monitor (GBM) on board Fermi. We study spectra
resolved in time at the level of 2-512 ms in the 8 keV-35 MeV energy range. We
find a strong correlation between the observed peak energy Ep and the flux P
within individual short GRBs. The slope of the Ep P^s correlation for
individual bursts ranges between ~0.4 and ~1. There is no correlation between
the low energy spectral index and the peak energy or the flux. Our results show
that in our 13 short GRBs Ep evolves in time tracking the flux. This behavior
is similar to what found in the population of long GRBs and it is in agreement
with the evidence that long GRBs and (the still few) short GRBs with measured
redshifts follow the same rest frame Ep-Liso correlation. Its origin is most
likely to be found in the radiative mechanism that has to be the same in both
classes of GRBs.Comment: 5 pages, 1 table, 3 figures. Accepted by MNRA
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