Ozone exchange within and above an irrigated Californian orchard

In this study, the canopy effects on the vertical ozone exchange within and above Californian orchard are investigated. We examined the comprehensive dataset obtained from the Canopy Horizontal Array Turbulence Study (CHATS). CHATS typifies a rural central Californian site, with O3 mixing ratios of less than 60 ppb and moderate NOx mixing ratios. The CHATS campaign covered a complete irrigation cycle, with our analysis including periods before and after irrigation. Lower O3 mixing ratios were found following irrigation, together with increased wind speeds, decreased air temperatures and increased specific humidity. Friction velocity, sensible heat and gas fluxes above the canopy were estimated using variations on the flux-gradient method, including a method which accounts for the roughness sublayer (RSL). These methods were compared to fluxes derived from observed eddy diffusivities of heat and friction velocity. We found that the use of the RSL parameterization, which accounts for the canopy-induced turbulent mixing above the canopy, resulted in a stronger momentum, heat, and ozone exchange fluxes above this orchard, compared to the method which omits the RSL. This was quantified by the increased friction velocity, heat flux and ozone deposition flux of up to 12, 29, and 35% at 2.5 m above the canopy, respectively. Within the canopy, vertical fluxes, as derived from local gradients and eddy diffusivity of heat, were compared to fluxes calculated using the Lagrangian inverse theory. Both methods showed a presence of vertical flux divergence of friction velocity, heat and ozone, suggesting that turbulent mixing was inefficient in homogenizing the effects driven by local sources and sinks on vertical exchange of those quantities. This weak mixing within the canopy was also corroborated in the eddy diffusivities of friction velocity and heat, which were calculated directly from the observations. Finally, the influence of water stress on the O3 budget was examined by comparing the results prior and after the irrigation. Although the analysis is limited to the local conditions, our in situ measurements indicated differences in the O3 mixing ratio prior and after irrigation during CHATS. We attribute these O3 mixing ratio changes to enhanced biological emission of volatile organic compounds (VOCs), driven by water stress

On the segregation of chemical species in a clear boundary layer over heterogeneous land surfaces

Using a Large-Eddy Simulation model, we have systematically studied the inability of boundary layer turbulence to efficiently mix reactive species. This creates regions where the species are accumulated in a correlated or anti-correlated way, thereby modifying the mean reactivity. We quantify this modification by the intensity of segregation, <i>I</i><sub>S</sub>, and analyse the driving mechanisms: heterogeneity of the surface moisture and heat fluxes, various background wind patterns and non-uniform isoprene emissions. The heterogeneous surface conditions are characterized by cool and wet forested patches with high isoprene emissions, alternated with warm and dry patches that represents pasture with relatively low isoprene emissions. For typical conditions in the Amazon rain forest, applying homogeneous surface forcings and in the absence of free tropospheric NO<sub>x</sub>, the isoprene-OH reaction rate is altered by less than 10%. This is substantially smaller than the previously assumed <i>I</i><sub>S</sub> of 50% in recent large-scale model analyses of tropical rain forest chemistry. Spatial heterogeneous surface emissions enhance the segregation of species, leading to alterations of the chemical reaction rates up to 20%. The intensities of segregation are enhanced when the background wind direction is parallel to the borders between the patches and reduced in the case of a perpendicular wind direction. The effects of segregation on trace gas concentrations vary per species. For the highly reactive OH, the differences in concentration averaged over the boundary layer are less than 2% compared to homogeneous surface conditions, while the isoprene concentration is increased by as much as 12% due to the reduced chemical reaction rates. These processes take place at the sub-grid scale of chemistry transport models and therefore need to be parameterized

Two perspectives on the coupled carbon, water and energy exchange in the planetary boundary layer

Understanding the interactions between the land surface and the atmosphere is key to modelling boundary-layer meteorology and cloud formation, as well as carbon cycling and crop yield. In this study we explore these interactions in the exchange of water, heat and CO2 in a cropland-atmosphere system at the diurnal and local scale. To that end, we couple an atmospheric mixed-layer model (MXL) to two land-surface schemes developed from two different perspectives: while one land-surface scheme (A-g(s)) simulates vegetation from an atmospheric point of view, the other (GECROS) simulates vegetation from a carbon-storage point of view. We calculate surface fluxes of heat, moisture and carbon, as well as the resulting atmospheric state and boundary-layer dynamics, over a maize field in the Netherlands, on a day for which we have a rich set of observations available. Particular emphasis is placed on understanding the role of upper-atmosphere conditions like subsidence in comparison to the role of surface forcings like soil moisture. We show that the atmospheric-oriented model (MXL-A-g(s)) outperforms the carbon storage-oriented model (MXL-GECROS) on this diurnal scale. We find this performance is partly due to the difference of scales at which the models were made to run. Most importantly, this performance strongly depends on the sensitivity of the modelled stomatal conductance to water stress, which is implemented differently in each model. This sensitivity also influences the magnitude of the surface fluxes of CO2, water and heat (surface control) and subsequently impacts the boundary-layer growth and entrainment fluxes (upper atmosphere control), which alter the atmospheric state. These findings suggest that observed CO2 mole fractions in the boundary layer can reflect strong influences of both the surface and upper-atmosphere conditions, and the interpretation of CO2 mole fraction variations depends on the assumed land-surface coupling. We illustrate this with a sensitivity analysis where high subsidence and soil moisture depletion, typical for periods of drought, have competing and opposite effects on the boundary-layer height h. The resulting net decrease in h induces a change of 12 ppm in the late-afternoon CO2 mole fraction. Also, the effect of such high subsidence and soil moisture depletion on the surface Bowen ratio are of the same magnitude. Thus, correctly including such two-way land-surface interactions on the diurnal scale can potentially improve our understanding and interpretation of observed variations in atmospheric CO2, as well as improve crop yield forecasts by better describing the water loss and carbon gain

A comparison of HONO budgets for two measurement heights at a field station within the boreal forest in Finland

Peer reviewe

The summertime Boreal forest field measurement intensive (HUMPPA-COPEC-2010): an overview of meteorological and chemical influences

This paper describes the background, instrumentation, goals, and the regional influences on the HUMPPA-COPEC intensive field measurement campaign, conducted at the Boreal forest research station SMEAR II (Station for Measuring Ecosystem-Atmosphere Relation) in Hyytiälä, Finland from 12 July–12 August 2010. The prevailing meteorological conditions during the campaign are examined and contrasted with those of the past six years. Back trajectory analyses show that meteorological conditions at the site in 2010 were characterized by a higher proportion of southerly flow than in the other years studied. As a result the summer of 2010 was anomalously warm and high in ozone making the campaign relevant for the analysis of possible future climates. A comprehensive land use analysis, provided on both 5 and 50 km scales, shows that the main vegetation types surrounding the site on both the regional and local scales are: coniferous forest (Scots pine and/or Norway spruce); mixed forest (Birch and conifers); and woodland scrub (e.g. Willows, Aspen); indicating that the campaign results can be taken as representative of the Boreal forest ecosystem. In addition to the influence of biogenic emissions, the measurement site was occasionally impacted by sources other than vegetation. Specific tracers have been used here to identify the time periods when such sources have impacted the site namely: biomass burning (acetonitrile and CO), urban anthropogenic pollution (pentane and SO<sub>2</sub>) and the nearby Korkeakoski sawmill (enantiomeric ratio of chiral monoterpenes). None of these sources dominated the study period, allowing the Boreal forest summertime emissions to be assessed and contrasted with various other source signatures