First evidence for zooplankton feeding sustaining key physiological processes in a scleractinian cold-water coral

Scleractinian cold-water corals (CWC) represent key taxa controlling deep-sea reef ecosystem functioning by providing structurally complex habitats to a high associated biodiversity, and by fuelling biogeochemical cycles via the release of organic matter. Nevertheless, our current knowledge on basic CWC properties, such as feeding ecology and key physiological processes (i.e. respiration, calcification and organic matter release), is still very limited. Here, we show evidence for the trophic significance of zooplankton, essentially sustaining levels of the investigated key physiological processes in the cosmopolitan CWC Desmophyllum dianthus (Esper 1794). Our results from laboratory studies reveal that withdrawal (for up to 3 weeks) of zooplankton food (i.e. Artemia salina) caused a significant decline in respiration (51%) and calcification (69%) rates compared with zooplankton-fed specimens. Likewise, organic matter release, in terms of total organic carbon (TOC), decreased significantly and eventually indicated TOC net uptake after prolonged zooplankton exclusion. In fed corals, zooplankton provided 1.6 times the daily metabolic C demand, while TOC release represented 7% of zooplankton-derived organic C. These findings highlight zooplankton as a nutritional source for D. dianthus, importantly sustaining respiratory metabolism, growth and organic matter release, with further implications for the role of CWC as deep-sea reef ecosystem engineersPublicado

Spatio-temporal monitoring of deep-sea communities using metabarcoding of sediment DNA and RNA

We assessed spatio-temporal patterns of diversity in deep-sea sediment communities using metabarcoding. We chose a recently developed eukaryotic marker based on the v7 region of the 18S rRNA gene. Our study was performed in a submarine canyon and its adjacent slope in the Northwestern Mediterranean Sea, sampled along a depth gradient at two different seasons. We found a total of 5,569 molecular operational taxonomic units (MOTUs), dominated by Metazoa, Alveolata and Rhizaria. Among metazoans, Nematoda, Arthropoda and Annelida were the most diverse. We found a marked heterogeneity at all scales, with important differences between layers of sediment and significant changes in community composition with zone (canyon vs slope), depth, and season. We compared the information obtained from metabarcoding DNA and RNA and found more total MOTUs and more MOTUs per sample with DNA (ca. 20% and 40% increase, respectively). Both datasets showed overall similar spatial trends, but most groups had higher MOTU richness with the DNA template, while others, such as nematodes, were more diverse in the RNA dataset. We provide metabarcoding protocols and guidelines for biomonitoring of these key communities in order to generate information applicable to management efforts

Dyfamed-benthos time series observations

In 1990, a benthic component to the DYFAMED (dynamics of fluxes in the Mediterranean) program, the DYFAMED-BENTHOS survey, was established to investigate the possible coupling of benthic to pelagic processes at a permanent station in >2700 m water depth, 52 km off Nice, France. Surface sediment was first sampled at different periods of the year to assess the importance of the biological compartment (particularly metazoan meiofauna) and its relation to seasonally varying particulate matter input to the sea floor (estimated by measuring surface sediment particle size and porosity, as well as chloroplastic pigments, organic carbon, nitrogen and calcium carbonate contents). Beginning in 1993, surface sediment was sampled at an average interval of 1.4 months for over five consecutive years using multicorers. Biogeochemical techniques such as deployments of a free-vehicle benthic respirometer and a near-bottom sediment trap, along with analyses of sediment vertical profiles for dissolved oxygen, nutrients and dissolved metals in the porewater, were developed in conjunction with more extensive biological analyses to characterize the recycling of organic matter, and ultimately increase our understanding of the oceanic carbon cycle. This article provides the scientific background and motivation for the development of the on-going DYFAMED-BENTHOS survey, the general characteristics of the benthic site, as well as a detailed description of the sampling design applied from late 1990–2000

DYFAMED-BENTHOS, a long time-series benthic survey at 2347-m depth in the northwestern Mediterranean: general introduction

In 1990, a benthic component to the DYFAMED (dynamics of fluxes in the Mediterranean) program, the DYFAMED-BENTHOS survey, was established to investigate the possible coupling of benthic to pelagic processes at a permanent station in > 2700 m water depth, 52 km off Nice, France. Surface sediment was first sampled at different periods of the year to assess the importance of the biological compartment (particularly metazoan meiofauna) and its relation to seasonally varying particulate matter input to the sea floor (estimated by measuring surface sediment particle size and porosity, as well as chloroplastic pigments, organic carbon, nitrogen and calcium carbonate contents). Beginning in 1993, surface sediment was sampled at an average interval of 1.4 months for over five consecutive years using multicorers. Biogeochemical techniques such as deployments of a free-vehicle benthic respirometer and a near-bottom sediment trap, along with analyses of sediment vertical profiles for dissolved oxygen, nutrients and dissolved metals in the porewater, were developed in conjunction with more extensive biological analyses to characterize the recycling of organic matter, and ultimately increase our understanding of the oceanic carbon cycle. This article provides the scientific background and motivation for the development of the on-going DYFAMED-BENTHOS survey, the general characteristics of the benthic site, as well as a detailed description of the sampling design applied from late 1990-2000. (C) 2002 Elsevier Science Ltd. All rights reserved