268 research outputs found

    CAPSL and MuCAPSL, Journal of Telecommunications and Information Technology, 2002, nr 4

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    Secure communication generally begins with a connection establishment phase in which messages are exchanged by client and server protocol software to generate, share, and use secret data or keys. This message exchange is referred to as an authentication or key distribution cryptographic protocol. CAPSL is a formal language for specifying cryptographic protocols. It is also useful for addressing the correctness of the protocols on an abstract level, rather than the strength of the underlying cryptographic algorithms. We outline the design principles of CAPSL and its integrated specification and analysis environment. Protocols for secure group management are essential in applications that are concerned with confidential authenticated communication among coalition members, authenticated group decisions, or the secure administration of group membership and access control. We will also discuss our progress on designing a new extension of CAPSL for multicast protocols, called MuCAPSL

    Species-Specific and Distance-Dependent Dispersive Behaviour of Forisomes in Different Legume Species

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    Forisomes are giant fusiform protein complexes composed of sieve element occlusion (SEO) protein monomers, exclusively found in sieve elements (SEs) of legumes. Forisomes block the phloem mass flow by a Ca2+-induced conformational change (swelling and rounding). We studied the forisome reactivity in four different legume species—Medicago sativa, Pisum sativum, Trifolium pratense and Vicia faba. Depending on the species, we found direct relationships between SE diameter, forisome surface area and distance from the leaf tip, all indicative of a developmentally tuned regulation of SE diameter and forisome size. Heat-induced forisome dispersion occurred later with increasing distance from the stimulus site. T. pratense and V. faba dispersion occurred faster for forisomes with a smaller surface area. Near the stimulus site, electro potential waves (EPWs)—overlapping action (APs), and variation potentials (VPs)—were linked with high full-dispersion rates of forisomes. Distance-associated reduction of forisome reactivity was assigned to the disintegration of EPWs into APs, VPs and system potentials (SPs). Overall, APs and SPs alone were unable to induce forisome dispersion and only VPs above a critical threshold were capable of inducing forisome reactions

    Broadband Meter-Wavelength Observations of Ionospheric Scintillation

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    Intensity scintillations of cosmic radio sources are used to study astrophysical plasmas like the ionosphere, the solar wind, and the interstellar medium. Normally these observations are relatively narrow band. With Low Frequency Array (LOFAR) technology at the Kilpisj\"arvi Atmospheric Imaging Receiver Array (KAIRA) station in northern Finland we have observed scintillations over a 3 octave bandwidth. ``Parabolic arcs'', which were discovered in interstellar scintillations of pulsars, can provide precise estimates of the distance and velocity of the scattering plasma. Here we report the first observations of such arcs in the ionosphere and the first broad-band observations of arcs anywhere, raising hopes that study of the phenomenon may similarly improve the analysis of ionospheric scintillations. These observations were made of the strong natural radio source Cygnus-A and covered the entire 30-250\,MHz band of KAIRA. Well-defined parabolic arcs were seen early in the observations, before transit, and disappeared after transit although scintillations continued to be obvious during the entire observation. We show that this can be attributed to the structure of Cygnus-A. Initial results from modeling these scintillation arcs are consistent with simultaneous ionospheric soundings taken with other instruments, and indicate that scattering is most likely to be associated more with the topside ionosphere than the F-region peak altitude. Further modeling and possible extension to interferometric observations, using international LOFAR stations, are discussed.Comment: 11 pages, 17 figure

    Genome-Wide Analysis of Interchromosomal Interaction Probabilities Reveals Chained Translocations and Overrepresentation of Translocation Breakpoints in Genes in a Cutaneous T-Cell Lymphoma Cell Line

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    In classical models of tumorigenesis, the accumulation of tumor promoting chromosomal aberrations is described as a gradual process. Next-generation sequencing-based methods have recently revealed complex patterns of chromosomal aberrations, which are beyond explanation by these classical models of karyotypic evolution of tumor genomes. Thus, the term chromothripsis has been introduced to describe a phenomenon, where temporarily and spatially confined genomic instability results in dramatic chromosomal rearrangements limited to segments of one or a few chromosomes. Simultaneously arising and misrepaired DNA double-strand breaks are also the cause of another phenomenon called chromoplexy, which is characterized by the presence of chained translocations and interlinking deletion bridges involving several chromosomes. In this study, we demonstrate the genome-wide identification of chromosomal translocations based on the analysis of translocation-associated changes in spatial proximities of chromosome territories on the example of the cutaneous T-cell lymphoma cell line Se-Ax. We have used alterations of intra- and interchromosomal interaction probabilities as detected by genome-wide chromosome conformation capture (Hi-C) to infer the presence of translocations and to fine-map their breakpoints. The outcome of this analysis was subsequently compared to datasets on DNA copy number alterations and gene expression. The presence of chained translocations within the Se-Ax genome, partly connected by intervening deletion bridges, indicates a role of chromoplexy in the etiology of this cutaneous T-cell lymphoma. Notably, translocation breakpoints were significantly overrepresented in genes, which highlight gene-associated biological processes like transcription or other gene characteristics as a possible cause of the observed complex rearrangements. Given the relevance of chromosomal aberrations for basic and translational research, genome-wide high-resolution analysis of structural chromosomal aberrations will gain increasing importance

    Calcification, skeletal structure and composition of the cold-water coral Desmophyllum dianthus

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    In the naturally acidified Comau Fjord (Chile), high densities of the cosmopolitan cold-water coral (CWC) Desmophyllum dianthus are found at or below aragonite saturation (Ωar ≀ 1). However, it is not known so far if seasonal changes in Ωar lead to seasonal differences in calcification rates and the corals’ ability to up-regulate the pH in the calcifying fluid (pHcf). In the present study, corals were sampled along both horizontal and vertical pH gradients (pHT = 7.6-7.9, Ωar = 0.76-1.45) in Comau Fjord. We compared D. dianthus’ calcification rates (buoyant weight technique) with the physico-chemical conditions in the water column (T, Ωar) in austral summer 2016/2017 and winter 2017. In order to determine the biological pHcf up-regulation of D. dianthus, the skeletal boron isotopic composition (ÎŽ11B) was measured in the upper part of the calyx between the septa, using a UV femtosecond laser ablation system connected to a multicollector inductively coupled plasma mass spectrometer (LA-MC-ICP-MS). Higher growth rates of D. dianthus were found in summer than in winter. Surprisingly, growth of D. dianthus was highest in undersaturated waters in both seasons (Ωar = 0.76 and 0.84) and cross-transplanted specimens were able to acclimatise to Ωar < 1. Therefore, the present study shows that Ωar alone is a poor predictor of D. dianthus growth. Skeletal analyses show a complex relationship between ÎŽ11B and the structure of the coral skeletons. ÎŽ11B measurements were highly variable, which may be attributed to the high calcification rates in the upper part of the coral calyx. Therefore, high resolution analyses of the skeletal composition and micro-structure will be conducted along the entire longitudinal section of D. dianthus skeletons using Raman microscopy and scanning electron microscopy (SEM). In addition, ÎŽ11B will be measured in different skeletal parts and compared to skeletal structure analyses for a reliable reconstruction of seawater pH at high temporal resolution using skeletons of D. dianthus grown under laboratory and field conditions (Comau Fjord, Chile)

    Transcriptional profiling of macaque microglia reveals an evolutionary preserved gene expression program

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    Microglia are tissue-resident macrophages of the central nervous system (CNS), and important for CNS development and homeostasis. In the adult CNS, microglia monitor environmental changes and react to tissue damage, cellular debris, and pathogens. Here, we present a gene expression profile of purified microglia isolated from the rhesus macaque, a non-human primate, that consists of 666 transcripts. The macaque microglia transcriptome was intersected with the transcriptional programs of microglia from mouse, zebrafish, and human CNS tissues, to determine (dis)similarities. This revealed an extensive overlap of 342 genes between the transcriptional profile of macaque and human microglia, and showed that the gene expression profile of zebrafish is most distant when compared to other species. Furthermore, an evolutionair core based on the overlapping gene expression signature from all four species was identified. This study presents a macaque microglia transcriptomics profile, and identifies a gene expression program in microglia that is preserved across species, underscoring their CNS-tailored tissue macrophage functions as innate immune cells with CNS-surveilling properties

    Optimized Trigger for Ultra-High-Energy Cosmic-Ray and Neutrino Observations with the Low Frequency Radio Array

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    When an ultra-high energy neutrino or cosmic ray strikes the Lunar surface a radio-frequency pulse is emitted. We plan to use the LOFAR radio telescope to detect these pulses. In this work we propose an efficient trigger implementation for LOFAR optimized for the observation of short radio pulses.Comment: Submitted to Nuclear Instruments and Methods in Physics Research Section

    What are the living conditions and health status of those who don't report their migration status? a population-based study in Chile

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    BACKGROUND: Undocumented immigrants are likely to be missing from population databases, making it impossible to identify an accurate sampling frame in migration research. No population-based data has been collected in Chile regarding the living conditions and health status of undocumented immigrants. However, the CASEN survey (Caracterizacion Socio- Economica Nacional) asked about migration status in Chile for the first time in 2006 and provides an opportunity to set the base for future analysis of available migration data. We explored the living conditions and health of self-reported immigrants and respondents who preferred not to report their migration status in this survey. METHODS: Cross-sectional secondary analysis of CASEN survey in Chile in 2006. Outcomes: any disability, illness/accident, hospitalization/surgery, cancer/chronic condition (all binary variables); and the number of medical/emergency attentions received (count variables). Covariates: Demographics (age, sex, marital status, urban/rural, ethnicity), socioeconomic status (education level, employment status and household income), and material standard of living (overcrowding, sanitation, housing quality). Weighted regression models were estimated for each health outcome, crude and adjusted by sets of covariates, in STATA 10.0. RESULTS: About 1% of the total sample reported being immigrants and 0.7% preferred not to report their migration status (Migration Status - Missing Values; MS-MV). The MS-MV lived in more deprived conditions and reported a higher rate of health problems than immigrants. Some gender differences were observed by health status among immigrants and the MS-MV but they were not statistically significant. Regressions indicated that age, sex, SES and material factors consistently affected MS-MVs’ chance of presenting poor health and these patterns were different to those found among immigrants. Great heterogeneity in both the MS-MV and the immigrants, as indicated by wide confidence intervals, prevented the identification of other significantly associated covariates. CONCLUSION: This is the first study to look at the living conditions and health of those that preferred not to respond their migration status in Chile. Respondents that do not report their migration status are vulnerable to poor health and may represent undocumented immigrants. Surveys that fail to identify these people are likely to misrepresent the experiences of immigrants and further quantitative and qualitative research is urgently required
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