194 research outputs found
Adaptation to dislodgement risk on wave-swept rocky shores in the snail Littorina saxatilis
The periwinkle Littorina saxatilis has repeatedly evolved both a small, fragile and globose "wave ecotype" confined to wave-swept shores and a large, robust and elongated "crab ecotype" found in nearby crab-rich but less-exposed shores. This phenotypic divergence is assumed to reflect, in some part, local adaptation to wave exposure, but this hypothesis has received incomplete experimental testing. Here, we report a test of the prediction that the wave ecotype has a higher capacity to resist water flow than the crab ecotype. We sampled snails along a crab-wave transect and measured their resistance to dislodgement in a high-speed water flume with water speeds that match those of breaking waves in a range of relevant field conditions. Snails from the wave environment were consistently more resistant to water flow than snails from the crab environment and high resistance was positively correlated with the surface area of the foot and the area of the outer aperture contour both relative to shell size, and to the extent of lateral shell compression. In a separate experiment, we found that snails raised in still water in a common garden showed higher resistance to water flow if originating from a wave environment than from a crab environment, and this was true both at juvenile (2 weeks) and adult (10 months) developmental stages. This result suggests genetic control of a distinct "wave adapted" phenotype, likely to be maintained under strong divergent selection between the two adjacent habitats
Cellular Effects of Bacterial N-3-Oxo-Dodecanoyl-L-Homoserine Lactone on the Sponge Suberites domuncula (Olivi, 1792): Insights into an Intimate Inter-Kingdom Dialogue.
International audienceSponges and bacteria have lived together in complex consortia for 700 million years. As filter feeders, sponges prey on bacteria. Nevertheless, some bacteria are associated with sponges in symbiotic relationships. To enable this association, sponges and bacteria are likely to have developed molecular communication systems. These may include molecules such as N-acyl-L-homoserine lactones, produced by Gram-negative bacteria also within sponges. In this study, we examined the role of N-3-oxododecanoyl-L-homoserine lactone (3-oxo-C12-HSL) on the expression of immune and apoptotic genes of the host sponge Suberites domuncula. This molecule seemed to inhibit the sponge innate immune system through a decrease of the expression of genes coding for proteins sensing the bacterial membrane: a Toll-Like Receptor and a Toll-like Receptor Associated Factor 6 and for an anti-bacterial perforin-like molecule. The expression of the pro-apoptotic caspase-like 3/7 gene decreased as well, whereas the level of mRNA of anti-apoptotic genes Bcl-2 Homolog Proteins did not change. Then, we demonstrated the differential expression of proteins in presence of this 3-oxo-C12-HSL using 3D sponge cell cultures. Proteins involved in the first steps of the endocytosis process were highlighted using the 2D electrophoresis protein separation and the MALDI-TOF/TOF protein characterization: α and β subunits of the lysosomal ATPase, a cognin, cofilins-related proteins and cytoskeleton proteins actin, α tubulin and α actinin. The genetic expression of some of these proteins was subsequently followed. We propose that the 3-oxo-C12-HSL may participate in the tolerance of the sponge apoptotic and immune systems towards the presence of bacteria. Besides, the sponge may sense the 3-oxo-C12-HSL as a molecular evidence of the bacterial presence and/or density in order to regulate the populations of symbiotic bacteria in the sponge. This study is the first report of a bacterial secreted molecule acting on sponge cells and regulating the symbiotic relationship
Shock waves in two-dimensional granular flow: effects of rough walls and polydispersity
We have studied the two-dimensional flow of balls in a small angle funnel,
when either the side walls are rough or the balls are polydisperse. As in
earlier work on monodisperse flows in smooth funnels, we observe the formation
of kinematic shock waves/density waves. We find that for rough walls the flows
are more disordered than for smooth walls and that shock waves generally
propagate more slowly. For rough wall funnel flow, we show that the shock
velocity and frequency obey simple scaling laws. These scaling laws are
consistent with those found for smooth wall flow, but here they are cleaner
since there are fewer packing-site effects and we study a wider range of
parameters. For pipe flow (parallel side walls), rough walls support many shock
waves, while smooth walls exhibit fewer or no shock waves. For funnel flows of
balls with varying sizes, we find that flows with weak polydispersity behave
qualitatively similar to monodisperse flows. For strong polydispersity, scaling
breaks down and the shock waves consist of extended areas where the funnel is
blocked completely.Comment: 11 pages, 15 figures; accepted for PR
Evidence of triggered star formation in G327.3-0.6. Dust-continuum mapping of an infrared dark cloud with P-ArT\'eMiS
Aims. Expanding HII regions and propagating shocks are common in the
environment of young high-mass star-forming complexes. They can compress a
pre-existing molecular cloud and trigger the formation of dense cores. We
investigate whether these phenomena can explain the formation of high-mass
protostars within an infrared dark cloud located at the position of G327.3-0.6
in the Galactic plane, in between two large infrared bubbles and two HII
regions. Methods: The region of G327.3-0.6 was imaged at 450 ? m with the CEA
P-ArT\'eMiS bolometer array on the Atacama Pathfinder EXperiment telescope in
Chile. APEX/LABOCA and APEX-2A, and Spitzer/IRAC and MIPS archives data were
used in this study. Results: Ten massive cores were detected in the P-ArT\'eMiS
image, embedded within the infrared dark cloud seen in absorption at both 8 and
24 ?m. Their luminosities and masses indicate that they form high-mass stars.
The kinematical study of the region suggests that the infrared bubbles expand
toward the infrared dark cloud. Conclusions: Under the influence of expanding
bubbles, star formation occurs in the infrared dark areas at the border of HII
regions and infrared bubbles.Comment: 4 page
Aquatic community response to volcanic eruptions on the Ecuadorian Andean flank: evidence from the palaeoecological record
Aquatic ecosystems in the tropical Andes are under increasing pressure from human modification of the landscape (deforestation and dams) and climatic change (increase of extreme events and 1.5 °C on average temperatures are projected for AD 2100). However, the resilience of these ecosystems to perturbations is poorly understood. Here we use a multi-proxy palaeoecological approach to assess the response of aquatic ecosystems to a major mechanism for natural disturbance, volcanic ash deposition. Specifically, we present data from two Neotropical lakes located on the eastern Andean flank of Ecuador. Laguna Pindo (1°27.132′S–78°04.847′W) is a tectonically formed closed basin surrounded by a dense mid-elevation forest, whereas Laguna Baños (0°19.328′S–78°09.175′W) is a glacially formed lake with an inflow and outflow in high Andean Páramo grasslands. In each lake we examined the dynamics of chironomids and other aquatic and semi-aquatic organisms to explore the effect of thick (> 5 cm) volcanic deposits on the aquatic communities in these two systems with different catchment features. In both lakes past volcanic ash deposition was evident from four large tephras dated to c.850 cal year BP (Pindo), and 4600, 3600 and 1500 cal year BP (Baños). Examination of the chironomid and aquatic assemblages before and after the ash depositions revealed no shift in composition at Pindo, but a major change at Baños occurred after the last event around 1500 cal year BP. Chironomids at Baños changed from an assemblage dominated by Pseudochironomus and Polypedilum nubifer-type to Cricotopus/Paratrichocladius type-II, and such a dominance lasted for approximately 380 years. We suggest that, despite potential changes in the water chemistry, the major effect on the chironomid community resulted from the thickness of the tephra being deposited, which acted to shallow the water body beyond a depth threshold. Changes in the aquatic flora and fauna at the base of the trophic chain can promote cascade effects that may deteriorate the ecosystem, especially when already influenced by human activities, such as deforestation and dams, which is frequent in the high Andes
Grain Dynamics in a Two-dimensional Granular Flow
We have used particle tracking methods to study the dynamics of individual
balls comprising a granular flow in a small-angle two-dimensional funnel. We
statistically analyze many ball trajectories to examine the mechanisms of shock
propagation. In particular, we study the creation of, and interactions between,
shock waves. We also investigate the role of granular temperature and draw
parallels to traffic flow dynamics.Comment: 17 pages, 24 figures. To appear in Phys.Rev.E. High res./color
figures etc. on http://www.nbi.dk/CATS/Granular/GrainDyn.htm
Unveiling Far-Infrared Counterparts of Bright Submillimeter Galaxies Using PACS Imaging
We present a search for Herschel-PACS counterparts of dust-obscured,
high-redshift objects previously selected at submillimeter and millimeter
wavelengths in the Great Observatories Origins Deep Survey North field. We
detect 22 of 56 submillimeter galaxies (39%) with a SNR of >=3 at 100 micron
down to 3.0 mJy, and/or at 160 micron down to 5.7 mJy. The fraction of SMGs
seen at 160 micron is higher than that at 100 micron. About 50% of
radio-identified SMGs are associated with PACS sources. We find a trend between
the SCUBA/PACS flux ratio and redshift, suggesting that these flux ratios could
be used as a coarse redshift indicator. PACS undetected submm/mm selected
sources tend to lie at higher redshifts than the PACS detected ones. A total of
12 sources (21% of our SMG sample) remain unidentified and the fact that they
are blank fields at Herschel-PACS and VLA 20 cm wavelength may imply higher
redshifts for them than for the average SMG population (e.g., z>3-4). The
Herschel-PACS imaging of these dust-obscured starbursts at high-redshifts
suggests that their far-infrared spectral energy distributions have
significantly different shapes than template libraries of local infrared
galaxies.Comment: 6 pages, 4 figures. ApJ Letters in pres
Statistical Computing on Non-Linear Spaces for Computational Anatomy
International audienceComputational anatomy is an emerging discipline that aims at analyzing and modeling the individual anatomy of organs and their biological variability across a population. However, understanding and modeling the shape of organs is made difficult by the absence of physical models for comparing different subjects, the complexity of shapes, and the high number of degrees of freedom implied. Moreover, the geometric nature of the anatomical features usually extracted raises the need for statistics on objects like curves, surfaces and deformations that do not belong to standard Euclidean spaces. We explain in this chapter how the Riemannian structure can provide a powerful framework to build generic statistical computing tools. We show that few computational tools derive for each Riemannian metric can be used in practice as the basic atoms to build more complex generic algorithms such as interpolation, filtering and anisotropic diffusion on fields of geometric features. This computational framework is illustrated with the analysis of the shape of the scoliotic spine and the modeling of the brain variability from sulcal lines where the results suggest new anatomical findings
Cracking Piles of Brittle Grains
A model which accounts for cracking avalanches in piles of grains subject to
external load is introduced and numerically simulated. The stress is
stochastically transferred from higher layers to lower ones. Cracked areas
exhibit various morphologies, depending on the degree of randomness in the
packing and on the ductility of the grains. The external force necessary to
continue the cracking process is constant in wide range of values of the
fraction of already cracked grains. If the grains are very brittle, the force
fluctuations become periodic in early stages of cracking. Distribution of
cracking avalanches obeys a power law with exponent .Comment: RevTeX, 6 pages, 7 postscript figures, submitted to Phys. Rev.
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