Longevity of Azotobacter cysts and a model for optimization of cyst density in liquid bioinoculants

Species of Azotobacter are known to form heat and desiccation-resistant cysts that have a long life span. Recently this property has been used to prepare nitrogen-fixing liquid bioinoculants useful for a variety of crops. The survival of Azotobacter cysts were determined in a liquid medium in order to estimate the shelf-life of a liquid cyst bioinoculant. A negative exponential model was fitted to the survivorship curve. The death rate increased with the initial density of cysts and ranged from 0.02 to 0.05 per month. The nitrogen-fixing ability dropped after two years. It was concluded that the shelf-life of cyst bioinoculants should be decided by the nitrogen-fixing ability rather than cyst survival. Based on the derived kinetics a model for optimization of cyst density in Azotobacter cyst-based liquid bioinoculants is proposed

Surface ozone scenario at Pune and Delhi during the decade of 1990s

Data on surface ozone concentration compiled for a 10-year period from 1990 to 1999 for Pune and Delhi are analyzed in terms of its frequency distribution, annual trend, diurnal variation and its relation with various meteorological and chemical parameters. It is found that the surface ozone concentration range showing highest frequency of occurrence at Pune is 0-5 ppb during winter and post-monsoon seasons and 15-20 ppb and 5-10 ppb during summer and monsoon seasons, respectively. It is 0-5 ppb at Delhi during all the seasons. The surface ozone concentration has shown a decreasing trend at Pune during the observational period with an average rate of decrease of 1.54 ppb/year. On the other hand, there is no trend whatsoever in the variation of surface ozone concentration at Delhi. Minimum value of surface ozone occurs before sunrise and maximum in the afternoon hours. Regression analyses of surface ozone with maximum temperature (r = 0.46 for Pune and 0.51 for Delhi, significant at more than 0.1) and NO 2 at respective locations indicate that surface ozone at these locations is mainly produced by photochemistry. Transport mechanism is also understood to have contributed significantly to the total concentration of ozone. Inverse relationship obtained between surface ozone concentration and relative humidity indicates that major photochemical paths for removal of ozone become effective when humidity increases at these locations

Biological Consequences of Tightly Bent DNA: The Other Life of a Macromolecular Celebrity

The mechanical properties of DNA play a critical role in many biological functions. For example, DNA packing in viruses involves confining the viral genome in a volume (the viral capsid) with dimensions that are comparable to the DNA persistence length. Similarly, eukaryotic DNA is packed in DNA-protein complexes (nucleosomes) in which DNA is tightly bent around protein spools. DNA is also tightly bent by many proteins that regulate transcription, resulting in a variation in gene expression that is amenable to quantitative analysis. In these cases, DNA loops are formed with lengths that are comparable to or smaller than the DNA persistence length. The aim of this review is to describe the physical forces associated with tightly bent DNA in all of these settings and to explore the biological consequences of such bending, as increasingly accessible by single-molecule techniques.Comment: 24 pages, 9 figure

Effect of an extract of Centella asiatica on the biodistribution of sodium pertechnetate (Na^99mTcO₄) and on the fixation of radioactivity on blood constituents

This study evaluates the effects of an acute treatment with a Centella asiatica (CA) extract on the biodistribution of the radiopharmaceutical Na99mTcO4 and on the fixation of technetium-99m on blood constituents. Wistar rats were treated with CA extract and, 1 hour after, Na99mTcO4 was administered; organs/tissues were withdrawn and weighted. The radioactivity was counted to calculate the percentage of activity per gram (%ATI/g). Also, blood samples were withdrawn, plasma (P), blood cells (BC), insoluble fraction (IF) and soluble fractions of P and BC were isolated and the radioactivity was counted to calculate the percentage of activity (%ATI). Data indicated that the acute treatment with CA extract changed significantly (p99mTcO4 and the fixation of the technetium-99m on blood constituents in an acute treatment

Assessing the conservation value of waterbodies: the example of the Loire floodplain (France)

In recent decades, two of the main management tools used to stem biodiversity erosion have been biodiversity monitoring and the conservation of natural areas. However, socio-economic pressure means that it is not usually possible to preserve the entire landscape, and so the rational prioritisation of sites has become a crucial issue. In this context, and because floodplains are one of the most threatened ecosystems, we propose a statistical strategy for evaluating conservation value, and used it to prioritise 46 waterbodies in the Loire floodplain (France). We began by determining a synthetic conservation index of fish communities (Q) for each waterbody. This synthetic index includes a conservation status index, an origin index, a rarity index and a richness index. We divided the waterbodies into 6 clusters with distinct structures of the basic indices. One of these clusters, with high Q median value, indicated that 4 waterbodies are important for fish biodiversity conservation. Conversely, two clusters with low Q median values included 11 waterbodies where restoration is called for. The results picked out high connectivity levels and low abundance of aquatic vegetation as the two main environmental characteristics of waterbodies with high conservation value. In addition, assessing the biodiversity and conservation value of territories using our multi-index approach plus an a posteriori hierarchical classification methodology reveals two major interests: (i) a possible geographical extension and (ii) a multi-taxa adaptation

Assessing the impact of environmental factors influencing the spatio-temporal distribution of Johnius belangerii (Cuvier, 1830) Belanger's croaker along Mumbai, Northwest Coast of India

903-907The aim of this study was to assess the impact of environmental factors influencing the spatio-temporal distribution of Johnius belangerii. Fishery independent fortnightly resource surveys were conducted in Mumbai waters from September, 2017 to May, 2018 to determine the effect of environmental variables on spatio-temporal distribution. A Generalized Additive Modelling (GAM) approach showed that distribution and abundance of J. belangerii varied spatio-temporally, and environmental factors were found to be influential. GAM models demonstrated that higher catch was located in waters of Sea Surface Temperature (SST) from 25.1 - 31.1  °C with Sea Bottom Temperature (SBT) values ranging from 26-31 °C and salinity of more than 34 0/00. Correlation of environment variables with Catch per Unit Effort (CPUE) suggests significant relationship with SST (0.81), SBT (0.85) and Sea Bottom Chlorophyll-a (0.73). The result of this study will be helpful for clearly understanding the intricacies of spatial distributions of fish in relation to changing habitat condition which will be useful in the sustainable management of aquatic resources

Controls on the composition and lability of dissolved organic matter in Siberia's Kolyma River basin

High-latitude northern rivers export globally significant quantities of dissolved organic carbon (DOC) to the Arctic Ocean. Climate change, and its associated impacts on hydrology and potential mobilization of ancient organic matter from permafrost, is likely to modify the flux, composition, and thus biogeochemical cycling and fate of exported DOC in the Arctic. This study examined DOC concentration and the composition of dissolved organic matter (DOM) across the hydrograph in Siberia's Kolyma River, with a particular focus on the spring freshet period when the majority of the annual DOC load is exported. The composition of DOM within the Kolyma basin was characterized using absorbance-derived measurements (absorbance coefficienta330, specific UV absorbance (SUVA254), and spectral slope ratio SR) and fluorescence spectroscopy (fluorescence index and excitation-emission matrices (EEMs)), including parallel factor analyses of EEMs. Increased surface runoff during the spring freshet led to DOM optical properties indicative of terrestrial soil inputs with high humic-like fluorescence, SUVA254, and low SRand fluorescence index (FI). Under-ice waters, in contrast, displayed opposing trends in optical properties representing less aromatic, lower molecular weight DOM. We demonstrate that substantial losses of DOC can occur via biological (∼30% over 28 days) and photochemical pathways (>29% over 14 days), particularly in samples collected during the spring freshet. The emerging view is therefore that of a more dynamic and labile carbon pool than previously thought, where DOM composition plays a fundamental role in controlling the fate and removal of DOC at a pan-Arctic scale

Variation of organic matter quantity and quality in streams at Critical Zone Observatory watersheds

The quantity and chemical composition of dissolved organic matter (DOM) in surface waters influence ecosystem processes and anthropogenic use of freshwater. However, despite the importance of understanding spatial and temporal patterns in DOM, measures of DOM quality are not routinely included as part of large-scale ecosystem monitoring programs and variations in analytical procedures can introduce artifacts. In this study, we used consistent sampling and analytical methods to meet the objective of defining variability in DOM quantity and quality and other measures of water quality in streamflow issuing from small forested watersheds located within five Critical Zone Observatory sites representing contrasting environmental conditions. Results show distinct separations among sites as a function of water quality constituents. Relationships among rates of atmospheric deposition, water quality conditions, and stream DOM quantity and quality are consistent with the notion that areas with relatively high rates of atmospheric nitrogen and sulfur deposition and high concentrations of divalent cations result in selective transport of DOM derived from microbial sources, including in-stream microbial phototrophs. We suggest that the critical zone as a whole strongly influences the origin, composition, and fate of DOM in streams. This study highlights the value of consistent DOM characterization methods included as part of long-term monitoring programs for improving our understanding of interactions among ecosystem processes as controls on DOM biogeochemistry

Third revision of the global surface seawater dimethyl sulfide climatology (DMS-Rev3)

This is the final version. Available on open access from Copernicus Publications via the DOI in this recordCode and data availability: ​​​​​​​The data used for creating the climatology, along with the algorithm, can be found in the online repository: https://doi.org/10.17632/hyn62spny2.1 (Mahajan, 2021).This paper presents an updated estimation of the bottom-up global surface seawater dimethyl sulfide (DMS) climatology. This update, called DMS-Rev3, is the third of its kind and includes five significant changes from the last climatology, L11 (Lana et al., 2011), that was released about a decade ago. The first change is the inclusion of new observations that have become available over the last decade, creating a database of 873 539 observations leading to an ∼18-fold increase in raw data as compared to the last estimation. The second is significant improvements in data handling, processing, and filtering, to avoid biases due to different observation frequencies which result from different measurement techniques. Thirdly, we incorporate the dynamic seasonal changes observed in the geographic boundaries of the ocean biogeochemical provinces. The fourth change involves the refinement of the interpolation algorithm used to fill in the missing data. Lastly, an upgraded smoothing algorithm based on observed DMS variability length scales (VLS) helps to reproduce a more realistic distribution of the DMS concentration data. The results show that DMS-Rev3 estimates the global annual mean DMS concentration to be ∼2.26 nM (2.39 nM without a sea-ice mask), i.e., about 4 % lower than the previous bottom-up L11 climatology. However, significant regional differences of more than 100 % as compared to L11 are observed. The global sea-to-air flux of DMS is estimated at ∼27.1 TgS yr-1, which is about 4 % lower than L11, although, like the DMS distribution, large regional differences were observed. The largest changes are observed in high concentration regions such as the polar oceans, although oceanic regions that were under-sampled in the past also show large differences between revisions of the climatology. Finally, DMS-Rev3 reduces the previously observed patchiness in high productivity regions. Copyright

ISSCR standards for the use of human stem cells in basic research.

The laboratory culture of human stem cells seeks to capture a cellular state as an in vitro surrogate of a biological system. For the results and outputs from this research to be accurate, meaningful, and durable, standards that ensure reproducibility and reliability of the data should be applied. Although such standards have been previously proposed for repositories and distribution centers, no widely accepted best practices exist for laboratory research with human pluripotent and tissue stem cells. To fill that void, the International Society for Stem Cell Research has developed a set of recommendations, including reporting criteria, for scientists in basic research laboratories. These criteria are designed to be technically and financially feasible and, when implemented, enhance the reproducibility and rigor of stem cell research