2,817 research outputs found
Thermal Diffusion and Specular Reflection, Monte Carlo-based Study on Human Skin via Pulsed Fiber Laser Energy
The aim of traditional Chinese medicine (TCM) in acupuncture is sometimes to restore and regulate energy balance by stimulating specific points along the specific meridians traced on the human body via different techniques such as mechanical pressure, moxibustion and others. Hence, physicians have struggled to improve treatment for common diseases such as migraine and headaches. Heat stimulation and some pharmacological effects from moxa have been attributed to the therapeutic efficacy of such techniques. As heat can diffuse through the tissue, skins temperature will rise in the surrounding tissue. In this work, heat diffusion on a simple, 5-layer model of human skin is presented. Based on this, and by using Monte Carlo techniques, a photon or a photon package is launched into the tissue for mimicking the propagation of such photons at two different wavelengths through the tissue. The method generally describes the scholastic nature of radiation interactions. Most of the laser energy is deposited within a volume which cross-sectional area is the size of the beam itself. As could be seen, in the epidermis layer of the model, the heat does not go deep and nearly all the heat diffusion occurs on the edges of the beam, causing losses. Heat dissipation occurs faster and goes down to 2°C in the adipose tissue since there is low water content in this region. On the contrary, there is a fast heat increase in the muscle layer, up to 6°C at the most superficial layer. Since melanin is the most important epidermal chromophore, it can be noted that light shows strong absorption via melanin, at 690nm laser wavelength. In the papillary dermis the heat decreases and spreads out to the surrounding tissue. Once it reaches the adipose tissue, the heat is not absorbed enough; therefore, it is transmitted into the muscle, where the temperature rise is higher and reaches nearly 40 °C. Finally, photodynamics in a simple 5-layer skin model were explored at two laser wavelengths: 690nm and 1069nm, where no thermal damage would be expected, given the energy level of the employed pulses. Such pulsed laser energy levels remain to be tested in living tissue
Optimum Power in a Multi-Span DWDM System Limited by Non-Linear Effects
Limitations imposed by Four-Wave Mixing (FWM), Amplified Spontaneous Emission (ASE), dispersion and Stimulated Raman Scattering (SRS) on a multi-spam DWDM system are theoretically studied. In this work, expression for the linear dispersion parameter D has been defined as a function of number of channels in order to separate FWM and SRS effects and calculates both maximum fibre length and optimum power. Additionally, our simulation results consider the effect of ASE noise from Erbium Doped Fibre Amplifiers (EDFAs). This theoretical analysis yields a set of design criteria from optimized multi-span DWDM systems
Truncated and Helix-Constrained Peptides with High Affinity and Specificity for the cFos Coiled-Coil of AP-1
Protein-based therapeutics feature large interacting surfaces. Protein folding endows structural stability to localised surface epitopes, imparting high affinity and target specificity upon interactions with binding partners. However, short synthetic peptides with sequences corresponding to such protein epitopes are unstructured in water and promiscuously bind to proteins with low affinity and specificity. Here we combine structural stability and target specificity of proteins, with low cost and rapid synthesis of small molecules, towards meeting the significant challenge of binding coiled coil proteins in transcriptional regulation. By iteratively truncating a Jun-based peptide from 37 to 22 residues, strategically incorporating i-->i+4 helix-inducing constraints, and positioning unnatural amino acids, we have produced short, water-stable, alpha-helical peptides that bind cFos. A three-dimensional NMR-derived structure for one peptide (24) confirmed a highly stable alpha-helix which was resistant to proteolytic degradation in serum. These short structured peptides are entropically pre-organized for binding with high affinity and specificity to cFos, a key component of the oncogenic transcriptional regulator Activator Protein-1 (AP-1). They competitively antagonized the cJun–cFos coiled-coil interaction. Truncating a Jun-based peptide from 37 to 22 residues decreased the binding enthalpy for cJun by ~9 kcal/mol, but this was compensated by increased conformational entropy (TDS ≤ 7.5 kcal/mol). This study demonstrates that rational design of short peptides constrained by alpha-helical cyclic pentapeptide modules is able to retain parental high helicity, as well as high affinity and specificity for cFos. These are important steps towards small antagonists of the cJun-cFos interaction that mediates gene transcription in cancer and inflammatory diseases
A simple method for detecting oncofetal chondroitin sulfate glycosaminoglycans in bladder cancer urine
Proteoglycans in bladder tumors are modified with a distinct oncofetal chondroitin sulfate (ofCS) glycosaminoglycan that is normally restricted to placental trophoblast cells. This ofCS-modification can be detected in bladder tumors by the malarial VAR2CSA protein, which in malaria pathogenesis mediates adherence of parasite-infected erythrocytes within the placenta. In bladder cancer, proteoglycans are constantly shed into the urine, and therefore have the potential to be used for detection of disease. In this study we investigated whether recombinant VAR2CSA (rVAR2) protein could be used to detect ofCS-modified proteoglycans (ofCSPGs) in the urine of bladder cancer patients as an indication of disease presence. We show that ofCSPGs in bladder cancer urine can be immobilized on cationic nitrocellulose membranes and subsequently probed for ofCS content by rVAR2 protein in a custom-made dot-blot assay. Patients with high-grade bladder tumors displayed a marked increase in urinary ofCSPGs as compared to healthy individuals. Urine ofCSPGs decreased significantly after complete tumor resection compared to matched urine collected preoperatively from patients with bladder cancer. Moreover, ofCSPGs in urine correlated with tumor size of bladder cancer patients. These findings demonstrate that rVAR2 can be utilized in a simple biochemical assay to detect cancer-specific ofCS-modifications in the urine of bladder cancer patients, which may be further developed as a noninvasive approach to detect and monitor the disease
Characterizing, modelling and understanding the climate variability of the deep water formation in the North-Western Mediterranean Sea
Observing, modelling and understanding the climate-scale variability of the deep water formation (DWF) in the North-Western Mediterranean Sea remains today very challenging. In this study, we first characterize the interannual variability of this phenomenon by a thorough reanalysis of observations in order to establish reference time series. These quantitative indicators include 31 observed years for the yearly maximum mixed layer depth over the period 1980–2013 and a detailed multi-indicator description of the period 2007–2013. Then a 1980–2013 hindcast simulation is performed with a fully-coupled regional climate system model including the high-resolution representation of the regional atmosphere, ocean, land-surface and rivers. The simulation reproduces quantitatively well the mean behaviour and the large interannual variability of the DWF phenomenon. The model shows convection deeper than 1000 m in 2/3 of the modelled winters, a mean DWF rate equal to 0.35 Sv with maximum values of 1.7 (resp. 1.6) Sv in 2013 (resp. 2005). Using the model results, the winter-integrated buoyancy loss over the Gulf of Lions is identified as the primary driving factor of the DWF interannual variability and explains, alone, around 50 % of its variance. It is itself explained by the occurrence of few stormy days during winter. At daily scale, the Atlantic ridge weather regime is identified as favourable to strong buoyancy losses and therefore DWF, whereas the positive phase of the North Atlantic oscillation is unfavourable. The driving role of the vertical stratification in autumn, a measure of the water column inhibition to mixing, has also been analyzed. Combining both driving factors allows to explain more than 70 % of the interannual variance of the phenomenon and in particular the occurrence of the five strongest convective years of the model (1981, 1999, 2005, 2009, 2013). The model simulates qualitatively well the trends in the deep waters (warming, saltening, increase in the dense water volume, increase in the bottom water density) despite an underestimation of the salinity and density trends. These deep trends come from a heat and salt accumulation during the 1980s and the 1990s in the surface and intermediate layers of the Gulf of Lions before being transferred stepwise towards the deep layers when very convective years occur in 1999 and later. The salinity increase in the near Atlantic Ocean surface layers seems to be the external forcing that finally leads to these deep trends. In the future, our results may allow to better understand the behaviour of the DWF phenomenon in Mediterranean Sea simulations in hindcast, forecast, reanalysis or future climate change scenario modes. The robustness of the obtained results must be however confirmed in multi-model studies
Magnetic state of plutonium ion in metallic Pu and its compounds
By LDA+U method with spin-orbit coupling (LDA+U+SO) the magnetic state and
electronic structure have been investigated for plutonium in \delta and \alpha
phases and for Pu compounds: PuN, PuCoGa5, PuRh2, PuSi2, PuTe, and PuSb. For
metallic plutonium in both phases in agreement with experiment a nonmagnetic
ground state was found with Pu ions in f^6 configuration with zero values of
spin, orbital, and total moments. This result is determined by a strong
spin-orbit coupling in 5f shell that gives in LDA calculation a pronounced
splitting of 5f states on f^{5/2} and f^{7/2} subbands. A Fermi level is in a
pseudogap between them, so that f^{5/2} subshell is already nearly completely
filled with six electrons before Coulomb correlation effects were taken into
account. The competition between spin-orbit coupling and exchange (Hund)
interaction (favoring magnetic ground state) in 5f shell is so delicately
balanced, that a small increase (less than 15%) of exchange interaction
parameter value from J_H=0.48eV obtained in constrain LDA calculation would
result in a magnetic ground state with nonzero spin and orbital moment values.
For Pu compounds investigated in the present work, predominantly f^6
configuration with nonzero magnetic moments was found in PuCoGa5, PuSi2, and
PuTe, while PuN, PuRh2, and PuSb have f^5 configuration with sizeable magnetic
moment values. Whereas pure jj coupling scheme was found to be valid for
metallic plutonium, intermediate coupling scheme is needed to describe 5f shell
in Pu compounds. The results of our calculations show that both spin-orbit
coupling and exchange interaction terms in the Hamiltonian must be treated in a
general matrix form for Pu and its compounds.Comment: 20 pages, LaTeX; changed discussion on reference pape
Acidic microenvironment plays a key role in human melanoma progression through a sustained exosome mediated transfer of clinically relevant metastatic molecules
Background: Microenvironment cues involved in melanoma progression are largely unknown. Melanoma is highly influenced in its aggressive phenotype by the changes it determinates in its microenvironment, such as pH decrease, in turn influencing cancer cell invasiveness, progression and tissue remodelling through an abundant secretion of exosomes, dictating cancer strategy to the whole host. A role of exosomes in driving melanoma progression under microenvironmental acidity was never described. Methods: We studied four differently staged human melanoma lines, reflecting melanoma progression, under microenvironmental acidic pHs pressure ranging between pH 6.0-6.7. To estimate exosome secretion as a function of tumor stage and environmental pH, we applied a technique to generate native fluorescent exosomes characterized by vesicles integrity, size, density, markers expression, and quantifiable by direct FACS analysis. Functional roles of exosomes were tested in migration and invasion tests. Then we performed a comparative proteomic analysis of acid versus control exosomes to elucidate a specific signature involved in melanoma progression. Results: We found that metastatic melanoma secretes a higher exosome amount than primary melanoma, and that acidic pH increases exosome secretion when melanoma is in an intermediate stage, i.e. metastatic non-invasive. We were thus able to show that acidic pH influences the intercellular cross-talk mediated by exosomes. In fact when exposed to exosomes produced in an acidic medium, pH naïve melanoma cells acquire migratory and invasive capacities likely due to transfer of metastatic exosomal proteins, favoring cell motility and angiogenesis. A Prognoscan-based meta-analysis study of proteins enriched in acidic exosomes, identified 11 genes (HRAS, GANAB, CFL2, HSP90B1, HSP90AB1, GSN, HSPA1L, NRAS, HSPA5, TIMP3, HYOU1), significantly correlating with poor prognosis, whose high expression was in part confirmed in bioptic samples of lymph node metastases. Conclusions: A crucial step of melanoma progression does occur at melanoma intermediate -stage, when extracellular acidic pH induces an abundant release and intra-tumoral uptake of exosomes. Such exosomes are endowed with pro-invasive molecules of clinical relevance, which may provide a signature of melanoma advancement
Cognitive loading affects motor awareness and movement kinematics but not locomotor trajectories during goal-directed walking in a virtual reality environment.
The primary purpose of this study was to investigate the effects of cognitive loading on movement kinematics and trajectory formation during goal-directed walking in a virtual reality (VR) environment. The secondary objective was to measure how participants corrected their trajectories for perturbed feedback and how participants' awareness of such perturbations changed under cognitive loading. We asked 14 healthy young adults to walk towards four different target locations in a VR environment while their movements were tracked and played back in real-time on a large projection screen. In 75% of all trials we introduced angular deviations of ±5° to ±30° between the veridical walking trajectory and the visual feedback. Participants performed a second experimental block under cognitive load (serial-7 subtraction, counter-balanced across participants). We measured walking kinematics (joint-angles, velocity profiles) and motor performance (end-point-compensation, trajectory-deviations). Motor awareness was determined by asking participants to rate the veracity of the feedback after every trial. In-line with previous findings in natural settings, participants displayed stereotypical walking trajectories in a VR environment. Our results extend these findings as they demonstrate that taxing cognitive resources did not affect trajectory formation and deviations although it interfered with the participants' movement kinematics, in particular walking velocity. Additionally, we report that motor awareness was selectively impaired by the secondary task in trials with high perceptual uncertainty. Compared with data on eye and arm movements our findings lend support to the hypothesis that the central nervous system (CNS) uses common mechanisms to govern goal-directed movements, including locomotion. We discuss our results with respect to the use of VR methods in gait control and rehabilitation
The Cost Implications of Less Tight Versus Tight Control of Hypertension in Pregnancy (CHIPS Trial).
The CHIPS randomized controlled trial (Control of Hypertension in Pregnancy Study) found no difference in the primary perinatal or secondary maternal outcomes between planned "less tight" (target diastolic 100 mm Hg) and "tight" (target diastolic 85 mm Hg) blood pressure management strategies among women with chronic or gestational hypertension. This study examined which of these management strategies is more or less costly from a third-party payer perspective. A total of 981 women with singleton pregnancies and nonsevere, nonproteinuric chronic or gestational hypertension were randomized at 14 to 33 weeks to less tight or tight control. Resources used were collected from 94 centers in 15 countries and costed as if the trial took place in each of 3 Canadian provinces as a cost-sensitivity analysis. Eleven hospital ward and 24 health service costs were obtained from a similar trial and provincial government health insurance schedules of medical benefits. The mean total cost per woman-infant dyad was higher in less tight versus tight control, but the difference in mean total cost (DM) was not statistically significant in any province: Ontario (24 469.06; DM 296 to 30 593.69 versus 5817; 95% confidence interval, -12 349; P=0.0725); or Alberta (25 510.49; DM 154 to $12 781; P=0.0637). Tight control may benefit women without increasing risk to neonates (as shown in the main CHIPS trial), without additional (and possibly lower) cost to the healthcare system. CLINICAL TRIAL REGISTRATION: URL: http://www.clinicaltrials.gov. Unique identifier: NCT01192412
- …