The Chen-Ruan cohomology of moduli of curves of genus 2 with marked points

In this work we describe the Chen-Ruan cohomology of the moduli stacks of smooth and stable genus 2 pointed curves, and its algebraic counterpart: the stringy Chow ring. In the first half of the paper we compute the additive structure of the Chen-Ruan cohomology ring for the moduli stack of stable pointed genus 2 curves, describing it as a rationally graded vector space. In the second part we give generators for the even Chen--Ruan cohomology ring as an algebra on the ordinary cohomology.Comment: 48 pages, 3 Figures. Final version to appear in Advances in Mathematic

Synergism between Inositol Polyphosphates and TOR Kinase Signaling in Nutrient Sensing, Growth Control, and Lipid Metabolism in Chlamydomonas

The networks that govern carbon metabolism and control intracellular carbon partitioning in photosynthetic cells are poorly understood. Target of Rapamycin (TOR) kinase is a conserved growth regulator that integrates nutrient signals and modulates cell growth in eukaryotes, though the TOR signaling pathway in plants and algae has yet to be completely elucidated. We screened the unicellular green alga Chlamydomonas reinhardtii using insertional mutagenesis to find mutants that conferred hypersensitivity to the TOR inhibitor rapamycin. We characterized one mutant, vip1-1, that is predicted to encode a conserved inositol hexakisphosphate kinase from the VIP family that pyrophosphorylates phytic acid (InsP6) to produce the low abundance signaling molecules InsP7 and InsP8. Unexpectedly, the rapamycin hypersensitive growth arrest of vip1-1 cells was dependent on the presence of external acetate, which normally has a growth-stimulatory effect on Chlamydomonas. vip1-1 mutants also constitutively overaccumulated triacylglycerols (TAGs) in a manner that was synergistic with other TAG inducing stimuli such as starvation. vip1-1 cells had reduced InsP7 and InsP8, both of which are dynamically modulated in wild-type cells by TOR kinase activity and the presence of acetate. Our data uncover an interaction between the TOR kinase and inositol polyphosphate signaling systems that we propose governs carbon metabolism and intracellular pathways that lead to storage lipid accumulationPeer reviewe

Influence of Pre-Training Predator Stress on the Expression of c-fos mRNA in the Hippocampus, Amygdala, and Striatum Following Long-Term Spatial Memory Retrieval

We have studied the influence of pre-training psychological stress on the expression of c-fos mRNA following long-term spatial memory retrieval. Rats were trained to learn the location of a hidden escape platform in the radial-arm water maze, and then their memory for the platform location was assessed 24 h later. Rat brains were extracted 30 min after the 24-h memory test trial for analysis of c-fos mRNA. Four groups were tested: (1) Rats given standard training (Standard); (2) Rats given cat exposure (Predator Stress) 30 min prior to training (Pre-Training Stress); (3) Rats given water exposure only (Water Yoked); and (4) Rats given no water exposure (Home Cage). The Standard trained group exhibited excellent 24 h memory which was accompanied by increased c-fos mRNA in the dorsal hippocampus and basolateral amygdala (BLA). The Water Yoked group exhibited no increase in c-fos mRNA in any brain region. Rats in the Pre-Training Stress group were classified into two subgroups: good and bad memory performers. Neither of the two Pre-Training Stress subgroups exhibited a significant change in c-fos mRNA expression in the dorsal hippocampus or BLA. Instead, stressed rats with good memory exhibited significantly greater c-fos mRNA expression in the dorsolateral striatum (DLS) compared to stressed rats with bad memory. This finding suggests that stressed rats with good memory used their DLS to generate a non-spatial (cue-based) strategy to learn and subsequently retrieve the memory of the platform location. Collectively, these findings provide evidence at a molecular level for the involvement of the hippocampus and BLA in the retrieval of spatial memory and contribute novel observations on the influence of pre-training stress in activating the DLS in response to long-term memory retrieval

Coexistence of nonequilibrium density and equilibrium energy distribution of quasiparticles in a superconducting qubit

The density of quasiparticles typically observed in superconducting qubits exceeds the value expected in equilibrium by many orders of magnitude. Can this out-of-equilibrium quasiparticle density still possess an energy distribution in equilibrium with the phonon bath? Here, we answer this question affirmatively by measuring the thermal activation of charge-parity switching in a transmon qubit with a difference in superconducting gap on the two sides of the Josephson junction. We then demonstrate how the gap asymmetry of the device can be exploited to manipulate its parity.Comment: Updated acknowledgements, corrected typo

A transient relativistic radio jet from Cygnus X-1

We report the first observation of a transient relativistic jet from the canonical black hole candidate, Cygnus X-1, obtained with the Multi-Element Radio-Linked Interferometer Network (MERLIN). The jet was observed in only one of six epochs of MERLIN imaging of the source during a phase of repeated X-ray spectral transitions in 2004 Jan--Feb, and this epoch corresponded to the softest 1.5-12 keV X-ray spectrum. With only a single epoch revealing the jet, we cannot formally constrain its velocity. Nevertheless, several lines of reasoning suggest that the jet was probably launched 0.5-4.0 days before this brightening, corresponding to projected velocities of 0.2c < v_app < 1.6c, and an intrinsic velocity of > 0.3c. We also report the occurrence of a major radio flare from Cyg X-1, reaching a flux density of ~120 mJy at 15 GHz, and yet not associated with any resolvable radio emission, despite a concerted effort with MERLIN. We discuss the resolved jet in terms of the recently proposed 'unified model' for the disc-jet coupling in black hole X-ray binaries, and tentatively identify the 'jet line' for Cyg X-1. The source is consistent with the model in the sense that a steady jet appears to persist initially when the X-ray spectrum starts softening, and that once the spectral softening is complete the core radio emission is suppressed and transient ejecta / shock observed. However, there are some anomalies, and Cyg X-1 clearly does not behave like a normal black hole transient in progressing to the canonical soft / thermal state once the ejection event has happened.Comment: Accepted for publication in MNRA

The legacy of 20th Century landscape change on today’s woodland carabid communities

Aim For many species, the effects of landscape change can involve a time lag and result in an extinction debt. The landscape matrix plays a vital role in supporting species populations. However, the importance of the historical composition and configuration of landscape mosaics has received little attention, with studies focusing on the effects of loss and fragmentation of single (focal) habitat over time. We investigated the importance of historical and contemporary landscape heterogeneity (composition and configuration) to identify how landscape change has, and is continuing to have, an effect on current woodland carabid communities. Location Lowland Britain. Methods Carabids were sampled from woodlands in 36 tetrads of 4 km2. Ordination methods analysed current community response to representations of contemporary and historical (1930’s) landscape heterogeneity. The effects of 80 years of landscape change on current carabid assemblages were compared among tetrads. Results Results are consistent with an extinction debt; carabid communities correlated significantly with the historical composition and configuration of the landscape, but not contemporary landscape configuration. Community assemblages have been shaped, and many species remain affiliated with landscape conditions that no longer exist, notably, large patches of broadleaf woodland and semi-natural grassland. Recent introduction of conifer plantations has had a negative effect on the abundance of many woodland species. For many common, slow-dispersing species, contemporary and historical landscapes offered sub-optimum woodland coverage indicating a lag effect that exceeds 80 years. Increased arable landcover and loss of semi-natural grassland and heathland points towards an ongoing detrimental impact on carabid populations. Main conclusions Compared with focal-habitat studies, the landscape mosaic approach provides a more comprehensive understanding of the effects of widespread landscape change on species communities. Conservation guidance includes new planting, maintenance and restoration of semi-natural habitats, implemented across multiple spatial scales and where feasible, considering both historical and contemporary landscape heterogeneity

Distinguishing parity-switching mechanisms in a superconducting qubit

Single-charge tunneling is a decoherence mechanism affecting superconducting qubits, yet the origin of excess quasiparticle excitations (QPs) responsible for this tunneling in superconducting devices is not fully understood. We measure the flux dependence of charge-parity (or simply, ``parity'') switching in an offset-charge-sensitive transmon qubit to identify the contributions of photon-assisted parity switching and QP generation to the overall parity-switching rate. The parity-switching rate exhibits a qubit-state-dependent peak in the flux dependence, indicating a cold distribution of excess QPs which are predominantly trapped in the low-gap film of the device. Moreover, we find that the photon-assisted process contributes significantly to both parity switching and the generation of excess QPs by fitting to a model that self-consistently incorporates photon-assisted parity switching as well as inter-film QP dynamics

A Population-Based Case–Control Study of Urinary Arsenic Species and Squamous Cell Carcinoma in New Hampshire, USA

Background: Chronic high arsenic exposure is associated with squamous cell carcinoma (SCC) of the skin, and inorganic arsenic (iAs) metabolites may play an important role in this association. However, little is known about the carcinogenicity of arsenic at levels commonly observed in the United States. Objective: We estimated associations between total urinary arsenic and arsenic species and SCC in a U.S. population. Methods: We conducted a population-based case–control SCC study (470 cases, 447 controls) in a U.S. region with moderate arsenic exposure through private well water and diet. We measured urinary iAs, monomethylarsonic acid (MMA), and dimethylarsinic acid (DMA), and summed these arsenic species (ΣAs). Because seafood contains arsenolipids and arsenosugars that metabolize into DMA through alternate pathways, participants who reported seafood consumption within 2 days before urine collection were excluded from the analyses. Results: In adjusted logistic regression analyses (323 cases, 319 controls), the SCC odds ratio (OR) was 1.37 for each ln-transformed microgram per liter increase in ln-transformed ΣAs concentration [ln(ΣAs)] (95% CI: 1.04, 1.80). Urinary ln(MMA) and ln(DMA) also were positively associated with SCC (OR = 1.34; 95% CI: 1.04, 1.71 and OR = 1.34; 95% CI: 1.03, 1.74, respectively). A similar trend was observed for ln(iAs) (OR = 1.20; 95% CI: 0.97, 1.49). Percent iAs, MMA, and DMA were not associated with SCC. Conclusions: These results suggest that arsenic exposure at levels common in the United States relates to SCC and that arsenic metabolism ability does not modify the association

Modelling The Cancer Growth Process By Stochastic Delay Diffferential Equations Under Verhults And Gompertz's Law

In this paper, the uncontrolled environmental factors are perturbed into the intrinsic growth rate factor of deterministic equations of the growth process. The growth process under two different laws which are Verhults and Gompertz’s law are considered, thus leading to stochastic delay differential equations (SDDEs) of logistic and Gompertzian, respectively. Gompertzian deterministic model has been proved to fit well the clinical data of cancerous growth, however the performance of stochastic model towards clinical data is yet to be confirmed. The prediction quality of logistic and Gompertzian SDDEs are evaluating by comparing the simulated results with the clinical data of cervical cancer growth. The parameter estimation of stochastic models is computed by using simulated maximum likelihood method. We adopt 4-stage stochastic Runge-Kutta to simulate the solution of stochastic models

Adaptation as a potential response to sea-level rise: a genetic basis for salinity tolerance in populations of a coastal marsh fish

Relative sea-level rise is resulting in the intrusion of saline waters into marshes historically dominated by fresh water. Saltwater intrusions can potentially affect resident marsh species, especially when storm-related tidal surges cause rapid changes in salinity. We examined the role of historical salinity exposure on the survival of Gambusia affinis from two locations in coastal Louisiana. At each location, we sampled fish populations from fresh, intermediate and brackish marshes. Individuals were then exposed to a salinity of 25‰ and survival time was measured. We found that fish from brackish and intermediate marshes had an increased tolerance to salinity stress relative to fish from freshwater environments. We then tested the descendents of fish from the fresh and brackish marshes, reared for two generation in fresh water, to determine if there was a genetic basis for differential survival. We found that descendents of individuals from brackish marshes showed elevated survivals relative to the descendents of fish with no historical exposure to salinity. The most reasonable mechanism to account for the differences in survival relative to historical exposure is genetic adaptation, suggesting that natural selection may play a role in the responses of resident marsh fishes to future increases in salinity