Traitements automatiques de palatogrammes (palatographie directe)

International audiencePalatography has been widely used to investigate consonants articulation. This technique has however some drawbacks since its records of the lingual palatine contact pattern most often does not take into account the shape of the palatal fold. This makes difficult palatine pattern comparison across speakers. To alleviate this limitation we propose a method to obtain a more realistic information about the articulation which copes with individual morphological differences.La palatographie a été largement utilisée pour examiner l'articulation de consonnes. Cette technique a cependant quelques inconvénients puisque la capture des patrons de contact linguopalatal ne prend le plus souvent pas en compte la forme du palais. Cela rend la comparaison de patrons linguopalataux entre locuteurs difficile. Pour atténuer cette limitation nous proposons une méthode permettant d'obtenir des informations plus réalistes sur l'articulation supportant les différences morphologiques individuelles

3D Palatography

International audienceStatic palatography has been widely used to investigate consonant articulation. The method is based on the observation of the tongue print (a black paste is spread on the tongue before the production) either directly onto the palate (direct palatography) or onto a pseudo palate (indirect palatography). This study has two main objectives. The first one is to provide an automatic analysis of the tongue print characteristic (size, shape, position onto the palate,...) in order to allow an objective description of the linguopalatal contact.The second one concerns the shape of the palate. Indeed, a simple picture (2D) analysis does not take into account the shape (3D) of the palate vault. To alleviate this 2D limitation, we propose a method based on the use of structured light which enables the computation of the palate shape

Supramolecular assembly of gelatin and inorganic polyanions: Fine-tuning the mechanical properties of nanocomposites by varying their composition and microstructure

A series of bionanocomposites has been synthesized through a complex coacervation process inducing the assembly of gelatin with a wide range of inorganic polyanions (IPyAs) differing by their diameter and charge and including polyoxometalates (POMs) and a polythiomolybdate cluster. The microstructure and stoichiometry of these hybrid coacervates, which are strongly dependent on the charge matching between both components, have been studied by combining Fourier transform infrared (FT-IR) spectroscopy, solid-state nuclear magnetic resonance (NMR), thermogravimetric analysis (TGA), elemental analysis, differential scanning calorimetry (DSC), scanning electron microscopy (SEM), and energy-dispersive X-ray (EDX) elemental mapping. The mechanical properties of these materials were deeply characterized by tensile measurements at large deformation, revealing different behaviors (i.e., elastomer and ductile), depending on the nature of the IPyA. It is noteworthy that the mechanical properties of these bionanocomposites are strongly enhanced, compared to pure gelatin hydrogels. When attempting to connect structure and properties in these bionanocomposites, we have demonstrated that the density of cross-links (gelatin triple helices and IPyA) is the key parameter to control the extensibility of these materials

Whole-genome sequencing-based antimicrobial resistance characterization and phylogenomic investigation of 19 multidrug-resistant and extended-spectrum beta-lactamase-positive Escherichia coli strains collected from hospital patients in Benin in 2019

The increasing worldwide prevalence of extended-spectrum beta-lactamase (ESBL) producing Escherichia coli constitutes a serious threat to global public health. Surgical site infections are associated with high morbidity and mortality rates in developing countries, fueled by the limited availability of effective antibiotics. We used whole-genome sequencing (WGS) to evaluate antimicrobial resistance and the phylogenomic relationships of 19 ESBL-positive E. coli isolates collected from surgical site infections in patients across public hospitals in Benin in 2019. Isolates were identified by MALDI-TOF mass spectrometry and phenotypically tested for susceptibility to 16 antibiotics. Core-genome multi-locus sequence typing and single-nucleotide polymorphism-based phylogenomic methods were used to investigate the relatedness between samples. The broader phylogenetic context was characterized through the inclusion of publicly available genome data. Among the 19 isolates, 13 different sequence types (STs) were observed, including ST131 (n = 2), ST38 (n = 2), ST410 (n = 2), ST405 (n = 2), ST617 (n = 2), and ST1193 (n = 2). The blaCTX-M-15 gene encoding ESBL resistance was found in 15 isolates (78.9%), as well as other genes associated with ESBL, such as blaOXA-1 (n = 14) and blaTEM-1 (n = 9). Additionally, we frequently observed genes encoding resistance against aminoglycosides [aac-(6')-Ib-cr, n = 14], quinolones (qnrS1, n = 4), tetracyclines [tet(B), n = 14], sulfonamides (sul2, n = 14), and trimethoprim (dfrA17, n = 13). Nonsynonymous chromosomal mutations in the housekeeping genes parC and gyrA associated with resistance to fluoroquinolones were also detected in multiple isolates. Although the phylogenomic investigation did not reveal evidence of hospital-acquired transmissions, we observed two very similar strains collected from patients in different hospitals. By characterizing a set of multidrug-resistant isolates collected from a largely unexplored environment, this study highlights the added value for WGS as an effective early warning system for emerging pathogens and antimicrobial resistance.The ARES (Académie de la Recherche pour l’Enseignement Supérieur), Belgium.http://www.frontiersin.org/Microbiologyam2022Genetic

Pour une démocratie socio-environnementale : cadre pour une plate-forme participative « transition écologique »

Contribution publiée in Penser une démocratie alimentaire Volume II – Proposition Lascaux entre ressources naturelles et besoins fondamentaux, F. Collart Dutilleul et T. Bréger (dir), Inida, San José, 2014, pp. 87-111.International audienceL’anthropocène triomphant actuel, avec ses forçages environnementaux et sociaux, est à l’origine de l’accélération des dégradations des milieux de vie sur Terre et de l’accentuation des tensions sociales et géopolitiques. Passer à un anthropocène de gestion équitable, informé et sobre vis-à-vis de toutes les ressources et dans tous les secteurs d’activité (slow anthropocene), impose une analyse préalable sur l’ensemble des activités et des rapports humains. Cette transition dite « écologique », mais en réalité à la fois sociétale et écologique, est tout sauf un ajustement technique de secteurs dits prioritaires et technocratiques. Elle est avant tout culturelle, politique et philosophique au sens propre du terme. Elle est un horizon pour des trajectoires de développement humain, pour des constructions sociales et économiques, censées redéfinir socialement richesse, bien-être, travail etc. La dénomination « transition écologique » est largement véhiculée, mais ses bases conceptuelles ne sont pas entièrement acquises ni même élaborées. Dans ce contexte, les étudiants en première année de Master BioSciences à l’Ecole Normale Supérieure (ENS) de Lyon ont préparé une première étude analytique de ce changement radical et global de société pour mieux comprendre dans quelle société ils souhaitent vivre, en donnant du sens aux activités humaines présentes et à venir. Une trentaine de dossiers sur divers secteurs d’activités et acteurs de la société ont été produits et ont servis de support à cette synthèse. Plus largement, le but est de construire un socle conceptuel et une plate-forme de travail sur lesquels les questions de fond, mais aussi opérationnelles, peuvent être posées et étudiées en permanence. Cette démarche participative est ouverte à la collectivité sur le site http://institutmichelserres.ens-lyon.fr/

The wide-field, multiplexed, spectroscopic facility WEAVE : survey design, overview, and simulated implementation

Funding for the WEAVE facility has been provided by UKRI STFC, the University of Oxford, NOVA, NWO, Instituto de Astrofísica de Canarias (IAC), the Isaac Newton Group partners (STFC, NWO, and Spain, led by the IAC), INAF, CNRS-INSU, the Observatoire de Paris, Région Île-de-France, CONCYT through INAOE, Konkoly Observatory (CSFK), Max-Planck-Institut für Astronomie (MPIA Heidelberg), Lund University, the Leibniz Institute for Astrophysics Potsdam (AIP), the Swedish Research Council, the European Commission, and the University of Pennsylvania.WEAVE, the new wide-field, massively multiplexed spectroscopic survey facility for the William Herschel Telescope, will see first light in late 2022. WEAVE comprises a new 2-degree field-of-view prime-focus corrector system, a nearly 1000-multiplex fibre positioner, 20 individually deployable 'mini' integral field units (IFUs), and a single large IFU. These fibre systems feed a dual-beam spectrograph covering the wavelength range 366-959 nm at R ∼ 5000, or two shorter ranges at R ∼ 20,000. After summarising the design and implementation of WEAVE and its data systems, we present the organisation, science drivers and design of a five- to seven-year programme of eight individual surveys to: (i) study our Galaxy's origins by completing Gaia's phase-space information, providing metallicities to its limiting magnitude for ∼ 3 million stars and detailed abundances for ∼ 1.5 million brighter field and open-cluster stars; (ii) survey ∼ 0.4 million Galactic-plane OBA stars, young stellar objects and nearby gas to understand the evolution of young stars and their environments; (iii) perform an extensive spectral survey of white dwarfs; (iv) survey  ∼ 400 neutral-hydrogen-selected galaxies with the IFUs; (v) study properties and kinematics of stellar populations and ionised gas in z 1 million spectra of LOFAR-selected radio sources; (viii) trace structures using intergalactic/circumgalactic gas at z > 2. Finally, we describe the WEAVE Operational Rehearsals using the WEAVE Simulator.PostprintPeer reviewe

The wide-field, multiplexed, spectroscopic facility WEAVE: Survey design, overview, and simulated implementation

WEAVE, the new wide-field, massively multiplexed spectroscopic survey facility for the William Herschel Telescope, will see first light in late 2022. WEAVE comprises a new 2-degree field-of-view prime-focus corrector system, a nearly 1000-multiplex fibre positioner, 20 individually deployable 'mini' integral field units (IFUs), and a single large IFU. These fibre systems feed a dual-beam spectrograph covering the wavelength range 366$-$959\,nm at $R\sim5000$, or two shorter ranges at $R\sim20\,000$. After summarising the design and implementation of WEAVE and its data systems, we present the organisation, science drivers and design of a five- to seven-year programme of eight individual surveys to: (i) study our Galaxy's origins by completing Gaia's phase-space information, providing metallicities to its limiting magnitude for $\sim$3 million stars and detailed abundances for $\sim1.5$ million brighter field and open-cluster stars; (ii) survey $\sim0.4$ million Galactic-plane OBA stars, young stellar objects and nearby gas to understand the evolution of young stars and their environments; (iii) perform an extensive spectral survey of white dwarfs; (iv) survey $\sim400$ neutral-hydrogen-selected galaxies with the IFUs; (v) study properties and kinematics of stellar populations and ionised gas in $z<0.5$ cluster galaxies; (vi) survey stellar populations and kinematics in $\sim25\,000$ field galaxies at $0.3\lesssim z \lesssim 0.7$; (vii) study the cosmic evolution of accretion and star formation using $>1$ million spectra of LOFAR-selected radio sources; (viii) trace structures using intergalactic/circumgalactic gas at $z>2$. Finally, we describe the WEAVE Operational Rehearsals using the WEAVE Simulator.Comment: 41 pages, 27 figures, accepted for publication by MNRA

The wide-field, multiplexed, spectroscopic facility WEAVE: Survey design, overview, and simulated implementation

WEAVE, the new wide-field, massively multiplexed spectroscopic survey facility for the William Herschel Telescope, will see first light in late 2022. WEAVE comprises a new 2-degree field-of-view prime-focus corrector system, a nearly 1000-multiplex fibre positioner, 20 individually deployable 'mini' integral field units (IFUs), and a single large IFU. These fibre systems feed a dual-beam spectrograph covering the wavelength range 366−959\,nm at R∼5000, or two shorter ranges at R∼20000. After summarising the design and implementation of WEAVE and its data systems, we present the organisation, science drivers and design of a five- to seven-year programme of eight individual surveys to: (i) study our Galaxy's origins by completing Gaia's phase-space information, providing metallicities to its limiting magnitude for ∼3 million stars and detailed abundances for ∼1.5 million brighter field and open-cluster stars; (ii) survey ∼0.4 million Galactic-plane OBA stars, young stellar objects and nearby gas to understand the evolution of young stars and their environments; (iii) perform an extensive spectral survey of white dwarfs; (iv) survey ∼400 neutral-hydrogen-selected galaxies with the IFUs; (v) study properties and kinematics of stellar populations and ionised gas in z1 million spectra of LOFAR-selected radio sources; (viii) trace structures using intergalactic/circumgalactic gas at z>2. Finally, we describe the WEAVE Operational Rehearsals using the WEAVE Simulator

COVID-19 symptoms at hospital admission vary with age and sex: results from the ISARIC prospective multinational observational study

Background: The ISARIC prospective multinational observational study is the largest cohort of hospitalized patients with COVID-19. We present relationships of age, sex, and nationality to presenting symptoms. Methods: International, prospective observational study of 60 109 hospitalized symptomatic patients with laboratory-confirmed COVID-19 recruited from 43 countries between 30 January and 3 August 2020. Logistic regression was performed to evaluate relationships of age and sex to published COVID-19 case definitions and the most commonly reported symptoms. Results: ‘Typical’ symptoms of fever (69%), cough (68%) and shortness of breath (66%) were the most commonly reported. 92% of patients experienced at least one of these. Prevalence of typical symptoms was greatest in 30- to 60-year-olds (respectively 80, 79, 69%; at least one 95%). They were reported less frequently in children (≤ 18 years: 69, 48, 23; 85%), older adults (≥ 70 years: 61, 62, 65; 90%), and women (66, 66, 64; 90%; vs. men 71, 70, 67; 93%, each P &lt; 0.001). The most common atypical presentations under 60 years of age were nausea and vomiting and abdominal pain, and over 60 years was confusion. Regression models showed significant differences in symptoms with sex, age and country. Interpretation: This international collaboration has allowed us to report reliable symptom data from the largest cohort of patients admitted to hospital with COVID-19. Adults over 60 and children admitted to hospital with COVID-19 are less likely to present with typical symptoms. Nausea and vomiting are common atypical presentations under 30 years. Confusion is a frequent atypical presentation of COVID-19 in adults over 60 years. Women are less likely to experience typical symptoms than men

La baignade en rivière : comment concilier les divers usages de l’eau en milieu naturel pour garantir la bonne qualité de l’eau de baignade ? Le cas du bassin de la Semois en Région wallonne de Belgique

La pratique de la baignade dans les eaux naturelles européennes est permise et soumise à la Directive 2006/7/CE relative à la qualité des eaux de baignade. En Région wallonne de Belgique, 36 sites aménagés en rivières et en lacs permettent cette activité en pleine nature. Étant donné que les rivières sont partagées par de multiples usagers, la complexité du milieu, les pressions diverses sur les ressources hydriques et la cohabitation avec d’autres usages de l’eau conduisent au risque de ne pouvoir garantir en permanence, durant la saison estivale, une qualité satisfaisante de toutes les eaux de baignade. Le modèle wallon de contrat de rivière offre un espace de rencontre entre tous les usagers de la rivière en prenant en compte les préoccupations de chacun en vue d’une gestion intégrée des cours d’eau. Cette approche basée sur la recherche d’un consensus entre les acteurs est traduite dans un programme d’actions concrètes. Trois actions du contrat de rivière Semois en faveur de la baignade sont présentées. Les deux premières actions conduisent à une amélioration de la qualité bactériologique de l’eau, la troisième permet de garantir un niveau d’eau suffisant pour permettre la baignade. La première action a donc permis d’améliorer la qualité bactériologique de la rivière. Les rivières étant les milieux récepteurs des eaux usées, une source importante de contamination provient du rejet des effluents même après une station d’épuration classique avec traitement biologique. Si le système de désinfection des eaux par UV est régulièrement appliqué en Région wallonne, l’installation pilote d’un taillis de saules à courte rotation en tant que support à un traitement tertiaire d’eaux usées domestiques a permis de constater un excellent abattement de la charge bactérienne. À côté de résultats satisfaisants en termes de réduction des charges en nitrates et phosphates, le taillis de saules permet de répondre aux normes de qualité des eaux de baignade. La seconde réalisation concerne l’abreuvement du bétail en cours d’eau qui constitue un facteur de risque non négligeable en milieu rural. Une nouvelle réglementation oblige la pose de clôtures le long des cours d’eau localisés en zone pâturée par le bétail dans un périmètre de 10 km en amont de la zone de baignade, mais il s’agit aussi de préserver l’usage « abreuvement du bétail ». Une étude comparative, entre un ruisseau protégé par des clôtures avec l’installation de bacs abreuvoirs pour l’alimentation en eau du bétail et un cours d’eau non protégé dans lequel le bétail divague, a permis de noter des abattements de l’ordre de 2 à 3 unités logarithmiques des germes de contamination fécale. La troisième action est relative à la restauration d’un ancien barrage à valeur patrimoniale et paysagère en vue de maintenir un niveau d’eau suffisant pour permettre la baignade dans l’un des huit sites en rivière Semois officiellement reconnus. Ces trois réalisations, qui ont été initiées dans le cadre d’un contrat de rivière, permettent de démontrer l’intérêt et la possibilité de concilier divers usages de l’eau et de répondre aux préoccupations des usagers, notamment des adeptes de la baignade en rivière. Au final, par l’organisation annuelle des journées européennes de la baignade qui se déroulent chaque année en Région wallonne, cette pratique populaire peut constituer un excellent support de sensibilisation du grand public à la bonne qualité des eaux de surface, tout en apportant un soutien citoyen à la mise en œuvre de la directive cadre eau