Genetic diversity increases with depth in red gorgonian populations of the Mediterranean Sea and the Atlantic Ocean

In the ocean, the variability of environmental conditions found along depth gradients exposes populations to contrasting levels of perturbation, which can be reflected in the overall patterns of species genetic diversity. At shallow sites, resource availability may structure large, persistent and well-connected populations with higher levels of diversity. In contrast, the more extreme conditions, such as thermal stress during heat waves, can lead to population bottlenecks and genetic erosion, inverting the natural expectation. Here we examine how genetic diversity varies along depth for a long-lived, important ecosystem-structuring species, the red gorgonian, Paramuricea clavata.Agência financiadora CESAM UID/AMB/50017/2019 Portuguese Foundation for Science and Technology FEDER, within the PT2020 Partnership Agreement FEDER, within the Compete 2020 Pew Marine Fellowship (USA) National Geographic Channel through project Deep Reefs, a National Geographic/Waitt grant W153-11 InAqua Conservation Fund (Oceanario de Lisboa) European Regional Development Fund (COMPETE program) Portuguese Foundation for Science and Technology SFRH/BPD/111003/2015 CCMAR/Multi/04326/2013 UID/MAR/04292/2013 PTDC/BIA-BIC/114526/2009 MARES Grant Joint Doctorate programme under Erasmus Mundus by Ghent University FPA 2011-0016info:eu-repo/semantics/publishedVersio

Open coast seagrass restoration. Can we do it? Large scale seagrass transplants

Some of the major challenges in seagrass restoration on exposed open coasts are the choice of transplant design that is optimal for coastlines periodically exposed to high water motion, and understanding the survival and dynamics of the transplanted areas on a long time-scale over many years. To contribute to a better understanding of these challenges, we describe here part of a large-scale seagrass restoration program conducted in a Marine Park in Portugal. The goal of this study was to infer if it was possible to recover seagrass habitat in this region, in order to restore its ecosystem functions. To infer which methods would produce better long term persistence to recover seagrass habitat, three factors were assessed: donor seagrass species, transplant season, source location. Monitoring was done three times a year for 8 years, in which areas and densities of the planted units were measured, to assess survival and growth. The best results were obtained with the species Zostera marina transplanted during spring and summer as compared to Zostera noltii and Cymodocea nodosa. Long-term persistence of established (well rooted) transplants was mainly affected by extreme winter storms but there was evidence of fish grazing effects also. Our results indicate that persistence assessments should be done in the long term, as all transplants were successful (survived and grew initially) in the short term, but were not resistant in the long term after a winter with exceptionally strong storms. The interesting observation that only the largest (11 m(2)) transplanted plot of Z marina persisted over a long time, increasing to 103 m(2) in 8 years, overcoming storms and grazing, raised the hypothesis that for a successful shift to a vegetated state it might be necessary to overpass a minimum critical size or tipping point. This hypothesis was therefore tested with replicates from two donor populations and results showed effects of size and donor population, as only the larger planting units (PUs) from one donor population persisted and expanded. It is recommended that in future habitat restoration efforts large PUs are considered.Project BIOMARES LIFE06 NAT/P/192 European Union LIFE Program cement company SECIL, Companhia de Cal e Cimentos S. A., Portugal Fundacao para a Ciencia e a Tecnologia FCT SFRH/BD/81086/2011 Pew Marine Fellowshipinfo:eu-repo/semantics/publishedVersio

A well-kept treasure at depth: precious red coral rediscovered in Atlantic deep coral gardens (SW Portugal) after 300 years

The highly valuable red coral Corallium rubrum is listed in several Mediterranean Conventions for species protection and management since the 1980s. Yet, the lack of data about its Atlantic distribution has hindered its protection there. This culminated in the recent discovery of poaching activities harvesting tens of kg of coral per day from deep rocky reefs off SW Portugal. Red coral was irregularly exploited in Portugal between the 1200s and 1700s, until the fishery collapsed. Its occurrence has not been reported for the last 300 years.info:eu-repo/semantics/publishedVersio

Cruise Summary Report - MEDWAVES survey. MEDiterranean out flow WAter and Vulnerable EcosystemS (MEDWAVES)

The MEDWAVES (MEDiterranean out flow WAter and Vulnerable EcosystemS) cruise targeted areas under the potential influence of the MOW within the Mediterranean and Atlantic realms. These include seamounts where Cold-water corals (CWCs) have been reported but that are still poorly known, and which may act as essential “stepping stones” connecting fauna of seamounts in the Mediterranean with those of the continental shelf of Portugal, the Azores and the Mid-Atlantic Ridge. During MEDWAVES sampling has been conducted in two of the case studies of ATLAS: Case study 7 (Gulf of Cádiz-Strait of Gibraltar-Alboran Sea) and Case study 8 (Azores). The initially targeted areas in the Atlantic were: the Gazul Mud volcano, in the Gulf of Cádiz (GoC) area, included in the case study 7, and the Atlantic seamounts Ormonde (Portuguese shelf) and Formigas (by Azores), both part of the case study 8. In the Mediterranean the targeted areas were The Guadiaro submarine canyon and the Seco de los Olivos (also known as Chella Bank) seamount. Unfortunately it was not possible to sample in Guadiaro due to time constraints originated by adverse meteorological conditions which obligate us to reduce the time at sea focusing only in 4 of the 5 initially planned areas. MEDWAVES was structured in two legs; the first leg took place from the 21st September (departure from Cádiz harbour in Spain) to the 13th October 2016 (arrival in Ponta Delgada, São Miguel, Azores, Portugal took place the 8th of October due to the meteorological conditions that obligated to conclude the first leg earlier as planned). during the Leg 1 sampling was carried out in Gazul, Ormonde and Formigas. The second leg started the 14th October (departure from Ponta Delgada) and finished the 26th October (arrival in Málaga harbour, Spain). MEDWAVES had a total of 30 effective sampling days, being 6 days not operative due to the adverse meteorological conditions experienced during the first leg which forced us to stay in Ponta Delgada from the 08th to the 13th October. During MEDWAVES the daily routine followed a similar scheme, depending of course on the weather and sea conditions. The main activity during the day, starting early in the morning (around 08:00 AM, once the night activities were finished), was the ROV deployment. Generally a single ROV dive of around 8 hours was performed, however in several occasions two dives were carried out in the same day (see General station list, Appendix II). After the ROV (and sometimes between two dives) the Box Corer and/or Van Veen Grab and/or Multicore was deployed. After these activities, during the night CTD-Rosette deployments and MB was conducted. Accordingly to this schema the scientific personnel worked in the day or in the night watch. A total of 215 sampling stations have been covered in MEDWAVES, using the following sampling gears: Multibeam echosounder, CTD-Rosette, LADCP, Box Corer, Van Veen Grab, Multicorer and a Remotely Operated Vehicle (ROV). Table 1 sumamrised the number of sampling stations conducted with each gear in each sampling zone. Additionally MB surveys have been conducted during the transits between area

Genetic diversity and local connectivity in the mediterranean red gorgonian coral after mass mortality events

Estimating the patterns of connectivity in marine taxa with planktonic dispersive stages is a challenging but crucial task because of its conservation implications. The red gorgonian Paramuricea clavata is a habitat forming species, characterized by short larval dispersal and high reproductive output, but low recruitment. In the recent past, the species was impacted by mass mortality events caused by increased water temperatures in summer. In the present study, we used 9 microsatellites to investigate the genetic structure and connectivity in the highly threatened populations from the Ligurian Sea (NW Mediterranean). No evidence for a recent bottleneck neither decreased genetic diversity in sites impacted by mass mortality events were found. Significant IBD pattern and high global F-ST confirmed low larval dispersal capability in the red gorgonian. The maximum dispersal distance was estimated at 20-60 km. Larval exchange between sites separated by hundreds of meters and between different depths was detected at each site, supporting the hypothesis that deeper subpopulations unaffected by surface warming peaks may provide larvae for shallower ones, enabling recovery after climatically induced mortality events

Performing fish counts with a wide-angle camera, a promising approach reducing divers' limitations

Visual standardised methods for census of reef fishes have long been used in fisheries management and biological surveys. However, these tools have inherent sources of bias and the SCUBA divers who perform them are highly constrained in terms of survey time,maximumdepth and frequency of sampling. Alternatives like underwater video are thus being recommended in a wide range of configurations. Yet, all these techniques are still limited in field of view, particularly when compared to the ability of a SCUBA diver performing censuses. In this scope, we evaluated the potential of an underwater wide-angle camera (UWC) to survey fish assemblages by testing it against instantaneous underwater visual census (UVC). Our results showed minimal yet significant differences between methods, mainly because of the camera's loss of resolution when under extreme visibility conditions. Both approaches had the same consistency and ability to detect changes in fish assemblages but, to estimate total species richness, the UWC needed less field effort. Moreover, a SCUBA diver performing census had an effect on fish assemblages which introduced differences of greater magnitude than those found between methods. The removal of the diver effect, the proven ability to detect changes in fish assemblages and the verified gain in field effort, pointed the wide-angle camera as a promising tool to perform census of reef fishes

High genetic differentiation of red gorgonian populations from the Atlantic Ocean and the Mediterranean Sea

Patterns of genetic variation within a species may be used to infer past events in the evolutionary history of marine species. In the present study we aimed to compare the genetic diversity of the red gorgonian Paramuricea clavata in the Atlantic Ocean and the Mediterranean Sea. For genetic markers we used microsatellites and a mitochondrial gene fragment. Our results revealed a distinct genetic composition and diversity between the Mediterranean and the Atlantic. The Mediterranean samples had higher microsatellite heterozygosity, allelic richness and private allelic richness. The hypotheses that can explain these patterns are the isolation of Atlantic populations and/or a founder effect. Additionally, a clear difference was obtained from the mitochondrial locus, since sequences from Atlantic and Mediterranean samples diverged by 1%, which is high for soft corals.Fundacao para a Ciencia e Tecnologia (FCT) under the COMPETE program - European Regional Development Fund [PTDC/BIA-BIC/114526/2009]MARES grantMARES is a Joint Doctorate programme [FPA 2011-0016]info:eu-repo/semantics/publishedVersio

Lead (Pb) profiles in red coral skeletons as high resolution records of pollution in the Mediterranean Sea

Lead (Pb) concentrations in long-lived Corallium species of known age, from the Mediterranean Sea, Atlantic and Pacific Oceans, were determined by laser ablation, inductively coupled plasma mass spectrometry (LA-ICPMS). Lead concentrations in a 2000-year-old sub-fossil Mediterranean C. rubrum are ca 0.09\u202f\ub1\u202f0.03\u202f\u3bcg/g. For the period 1894\u20131955, lead concentrations in C. rubrum skeletons from the Mediterranean are stable within the range 0.2\u20130.4\u202f\u3bcg/g; concentrations increase to about 1\u20131.2\u202f\u3bcg/g during the period 1960\u20131978, then decrease progressively to stabilize and reach values in the range 0.2\u20130.4\u202f\u3bcg/g in present-day corals. These variations can be related to the lead gasoline pollution event that (1) started in the early 1950s with the increase of the numbers of cars in the world, and (2) was mitigated by the implementation of new regulations starting in 1975, leading to a return to pre-1950 levels in 2000. In the Pacific, lead concentrations in C. japonicum and C. konojoi are lower than in the Mediterranean C. rubrum, with values close to 0.17\u202f\ub1\u202f0.03\u202f\u3bcg/g. The lowest lead concentrations in present-day samples (0.11\u202f\u3bcg/g) are found in C. johnsoni and C. niobe from the Azores islands in the Atlantic, and in a Mediterranean C. rubrum from Montecristo Island, one of the least accessible and most protected areas in the Mediterranean Sea. Using lead concentrations in C. rubrum and in the Mediterranean seawaters, a partition coefficient Kd\u202f=\u202f[Pb/Ca]calcite / [Pb/Ca]seawater of 13 \ub13 is estimated; it allows calculating past and present lead contents in seawater in which corals grew. Application to Corallium species indicates that values endangering human health or threatening the preservation of aquatic ecosystem on long terms were nearly reached or exceeded in Mediterranean seawaters at the maximum of the lead gasoline pollution event in the 1980s. Measurements in C. rubrum from different places in the Mediterranean indicate that present-day seawater concentrations vary between 40 and 200\u202fpmol/kg. As expected, the lowest concentrations come from protected areas insulated from human activities, while the highest come from places close to lead mining or processing sites

Comparison of small remotely operated vehicles and diver-operated video of circalittoral benthos

Underwater video transect methods using small remotely operated vehicles (ROVs) and diveroperated video (DOV) are commonly used in benthic biodiversity assessments. Constraints posed by deeper waters have made surveys of the circalittoral zone ([30 m depth), a particularly challenging problem. Here we compare benthic diversity metrics and cluster analyses obtained with ROV and DOV between 45 and 65 m depth off southwest Iberia, across local (tens to hundreds of meters) and regional scales (tens of kilometers). Results showed no difference between methods in terms of the benthic species richness, taxonomic distinctness, and beta diversity, but only minor differences in the spatial structure depicted at the regional level. At the local scale, DOV performed better at discriminating patterns likely because of the divers visual acuity. We found that small ROV and DOV are reliable and comparable methods for the study of circalittoral benthic assemblages and can be used in a complimentary way to detect the greatest amount of variation in benthic ecosystems. Our study facilitates the understanding of capabilities and limitations of two underwater video methods and provides important insight into choice of the most appropriate technique.info:eu-repo/semantics/publishedVersio