Enzymatic heterozygosity and morphological variance in synthetic populations of Drosophila melanogaster

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Characterization and evaluation of Ni/SiO catalysts for hydrogen production and tar reduction from catalytic steam pyrolysis-reforming of refuse derived fuel

A series of Ni/SiO catalysts have been prepared and investigated for their suitability for hydrogen production and tar reduction in a two-stage pyrolysis-reforming system, using refuse derived fuel (RDF) as the raw material. Experiments were conducted at a pyrolysis temperature of 600°C, and a reforming temperature of 800°C. The product gases were analysed by gas chromatography (GC) and the condensed fraction was collected and quantified using gas chromatography-mass spectrometry (GC-MS). The effects of the catalyst preparation method, nickel content and the addition of metal promoters (Ce, Mg, Al), were investigated. Catalysts were characterised using BET surface area analysis, temperature programmed oxidation (TPO), and scanning electron microscopy (SEM). The TPO and SEM analysis of the reacted catalysts showed that amorphous type carbons tended to be deposited over the Ni/SiO catalysts prepared by impregnation, while filamentous type carbons were favoured with the sol-gel prepared catalysts. The influence of catalyst promoters (Ce, Mg, Al) added to the Ni/SiO catalyst prepared by the sol-gel method was found not to be significant, as the H production was not increased and the tar formation was not reduced with the metal-added catalyst. The highest H concentration of 57.9vol.% and lower tar amount produced of 0.24mg/g; were obtained using the 20wt.% Ni/SiO catalyst prepared by sol-gel. On the other hand a low catalytic activity for H production and higher tar produced were found for the impregnated series of catalysts, which might be due to the smaller surface area, pore size and due to the formation of amorphous carbons on the catalyst surface. Alkenes and alcohol functional groups were mainly found in the analysed tar samples, with major concentrations of styrene, phenol, indene, cresols, naphthalene, fluorene, and phenanthrene

Litterfall, litter decomposition and associated nutrient fluxes in Pinus halepensis: influence of tree removal intensity in a Mediterranean forest

The online version of this article (doi:10.1007/s10342-015-0893-z) contains supplementary material, which is available to authorized users[EN] Our knowledge about the influence of silvicultural treatments on nutrient cycling processes in Mediterranean forests is still limited. Four levels of tree removal were compared in an Aleppo pine forest in eastern Spain to determine the effects on litterfall, litter decomposition and the associated nutrient fluxes after 12 years. Removal treatments included clearfelling, two shelterwood intensities (60 and 75 % of basal area removed) and untreated controls. Twelve years later, the basal area removed still explained 60 % of litterfall mass variance and 60 % of C, 52 % of N, 45 % of P, 17 % of K, 47 % of Ca and 60 % of Mg return variances. Litter decomposed somewhat more slowly in clearfellings compared to controls (p = 0.049), accumulated more Ca and released less K compared to the other three treatments. This was explained by contamination with mineral particles due to the poorly developed O horizon in clearfellings. We conclude that the management practices reduced the nutrient return via litterfall, but the nutrient release through decomposition seems poorly sensitive to canopy disturbance. In order to accurately quantify the harvesting impacts on nutrient cycling in this Mediterranean forest system, it is necessary to measure the litterfall of the understory layer.This work has been supported by a fellowship from the Generalitat Valenciana, Conselleria de Educacion, Formacion y Empleo awarded to L. Lado-Monserrat (BFPI/2008/041). Silvicultural treatments were carried out by the Mediterranean Centre for Environmental Studies (CEAM) through programme "I + D en relacion con la restauracion de la cubierta vegetal y otros aspectos de investigacion forestal". Dataloggers and probes were provided by the Generalitat Valenciana through Project "Efecto de diferentes sistemas de aclareo de masa forestal sobre la disponibilidad de agua, nutrientes y la regeneracion de la masa arborea y arbustiva en parcelas de pinar" (GV06/126). We acknowledge Joana Oliver, Ruth M. Tavera and Daniel Fortanet for their help in the laboratory and in the field. The authors wish to thank Francisco Galiana for his assistance, including help in fieldwork and providing information about the experimental design of the silvicultural treatments. Thanks also go to Rafael Herrera from the Centro de Ecologia, Instituto Venezolano de Investigaciones Cientificas, Caracas, Venezuela and two anonymous reviewers for critically reviewing the manuscript.Lado Monserrat, L.; Lidón, A.; Bautista, I. (2015). Litterfall, litter decomposition and associated nutrient fluxes in Pinus halepensis: influence of tree removal intensity in a Mediterranean forest. 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For Ecol Manage 255:2022–2023Blair JM, Crossley DA Jr (1988) Litter decomposition, nitrogen dynamics and litter microarthropods in a southern Appalachian hardwood forest 8 years following clearcutting. J Appl Ecol 25:683–698Blanco JA, Zavala MA, Imbert JB, Castillo FJ (2005) Sustainability of forest management practices: evaluation through a simulation model of nutrient cycling. For Ecol Manage 213:209–228Blanco JA, Imbert JB, Castillo FJ (2006) Influence of site characteristics and thinning intensity on litterfall production in two Pinus sylvestris L. forests in the western Pyrenees. For Ecol Manage 237:342–352Blanco JA, Imbert JB, Castillo FJ (2008) Nutrient return via litterfall in two contrasting Pinus sylvestris forests in the Pyrenees under different thinning intensities. For Ecol Manage 256:1840–1852Blanco JA, Imbert JB, Castillo FJ (2011) Thinning affects Pinus sylvestris needle decomposition rates and chemistry differently depending on site conditions. Biogeochemistry 106:397–414Caldentey J, Ibarra M, Hernández J (2001) Litter fluxes and decomposition in Nothofagus pumilio stands in the region of Magallanes, Chile. For Ecol Manage 148:145–157Christensen JH, Krishna Kumar K, et al. (2013) Climate phenomena and their relevance for future regional climate change. In: Stocker TF, Qin D, Plattner G-K et al (Eds.) Climate change 2013: the physical science basis. Contribution of Working Group I to the Fifth Assessment Report of the Intergovernmental Panel on Climate Change. Cambridge University Press, Cambridge, United Kingdom and New York, NY, USACortina J, Vallejo VR (1994) Effects of clearfelling on forest floor accumulation and litter decomposition in a radiata pine plantation. For Ecol Manage 70:299–310Entry JA, Rose CL, Cromack K Jr (1991) Litter decomposition and nutrient release in ectomycorrhizal mat soils of a Douglas fir ecosystem. 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(Original in Spanish)Guo LB, Sims REH (1999) Litter decomposition and nutrient release via litter decomposition in New Zealand eucalypt short rotation forests. Agric Ecosyst Environ 75:133–140GVA (1995) Mapa de Suelos de la Comunidad Valenciana. Chelva (666). Proyecto LUCDEME (Icona), Centro de Investigaciones sobre Desertificación y Conselleria d’Agricultura i Mig Ambient. Generalitat Valenciana. Valencia, Spain. (Original in Spanish)Hennessey TC, Dougherty PM, Cregg BM, Wittwer RF (1992) Annual variation in needle fall of a loblolly pine stand in relation to climate and stand density. For Ecol Manage 51:329–338Inagaki Y, Kuramoto S, Torii A, Shinomiya Y, Fukata H (2008) Effects of thinning on leaf-fall and leaf-litter nitrogen concentration in hinoki cypress (Chamaecyparis obtusa Endlicher) plantation stands in Japan. For Ecol Manage 255:1859–1867Jonard M, Misson L, Ponette Q (2006) Long-term thinning effects on the forest floor and the foliar nutrient status of Norway spruce stands in the Belgian Ardennes. Can J For Res 36:2684–2695Kim C, Sharik TL, Jurgensen MF (1996a) Canopy cover effects on mass loss, and nitrogen and phosphorus dynamics from decomposing litter in oak and pine stands in northern Lower Michigan. For Ecol Manage 80:13–20Kim C, Sharik TL, Jurgensen MF (1996b) Litterfall, nitrogen and phosphorus inputs at various levels of canopy removal in oak and pine stands in northern lower Michigan. Am Midl Nat 135:195–204Kim C, Son Y, Lee WK, Jeong J, Noh NJ, Kim SR, Yang AR, Ju NG (2012) Influence of forest tending (Soopkakkugi) works on litterfall and nutrient inputs in a Pinus densiflora stand. For Sci Technol 8:83–88Kimmins JP (2004) Forest ecology, a foundation for sustainable management and environmental ethics in forestry. Prentice-Hall, New JerseyKimmins JP, Mailly D, Seely B (1999) Modelling forest ecosystem net primary production: the hybrid simulation approach used in FORECAST. Ecol Modell 122:195–224Klemmedson JO, Meier CE, Campbell RE (1990) Litter fall transfers of dry matter and nutrients in ponderosa pine stands. Can J For Res 20:1105–1115Kunhamu TK, Kumar BM, Viswanath S (2009) Does thinning affect litterfall, litter decomposition, and associated nutrient release in Acacia mangium stands of Kerala in peninsular India? Can J For Res 39:792–801Lytle DE, Cronan CS (1998) Comparative soil CO2 evolution, litter decay, and root dynamics in clearcut and uncut spruce–fir forest. For Ecol Manage 103:121–128Molina AJ, Del Campo AD (2012) The effects of experimental thinning on throughfall and stemflow: a contribution towards hydrology-oriented silviculture in Aleppo pine plantations. For Ecol Manage 269:206–213Navarro FB, Romero-Freire A, Del Castillo T, Foronda A, Jiménez MN, Ripoll MA, Sánchez-Miranda A, Hutsinger L, Fernández-Ondoño E (2013) Effects of thinning on litterfall were found after years in a Pinus halepensis afforestation area at tree and stand levels. For Ecol Manage 289:354–362Olson JS (1963) Energy storage and the balance of producers and decomposers in ecological systems. Ecology 44:322–331Pérez Cueva AJ (1994) Atlas Climático de la Comunidad Valenciana. Colección Territori nº 4. Generalitat Valenciana. Conselleria d’Obres Publiques, Urbanisme i Transport, ValenciaPetritsch R, Hasenauer H, Pietsch SA (2007) Incorporating forest growth response to thinning within biome-BGC. For Ecol Manage 242:324–336Prescott CE (1997) Effects of clearcutting and alternative silvicultural systems on rates of decomposition and nitrogen mineralization in a coastal montane coniferous forest. 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The first crystal structure of human RNase6 reveals a novel substrate binding and cleavage site arrangement

Human RNase 6 is a cationic secreted protein that belongs to the RNase A superfamily. Its expression is induced in neutrophils and monocytes upon bacterial infection, suggesting a role in host defence. We present here the crystal structure of RNase 6 obtained at a 1.72 Å resolution, being the first report for the protein threedimensional structure and thereby setting the basis for functional studies. The structure shows an overall kidney shaped globular fold shared with the other known family members. Three sulphate anions bound to RNase 6 were found, interacting to residues at the main active site (His15, His122 and Gln14) and cationic surface exposed residues (His36, His39, Arg66 and His67). Kinetic characterization, together with prediction of protein -nucleotide complexes by molecular dynamics, was applied to analyse the RNase 6 substrate nitrogenous base and phosphate selectivity. Our results reveal that, although RNase 6 is a moderate catalyst in comparison to the pancreatic RNase type, its structure includes lineage specific features that facilitate its activity towards polymeric nucleotide substrates. In particular, enzyme interactions at the substrate 5' end can provide an endonuclease type cleavage pattern. Interestingly, the RNase 6 crystal structure revealed a novel secondary active site conformed by the His36-His39 dyad that facilitates the polynucleotide substrate catalysis

Multinational tagging efforts illustrate regional scale of distribution and threats for east pacific green turtles (Chelonia mydas agassizii).

Published onlineJournal ArticleResearch Support, Non-U.S. Gov'tThis is the final version of the article. Available from Public Library of Science via the DOI in this record.To further describe movement patterns and distribution of East Pacific green turtles (Chelonia mydas agassizii) and to determine threat levels for this species within the Eastern Pacific. In order to do this we combined published data from existing flipper tagging and early satellite tracking studies with data from an additional 12 satellite tracked green turtles (1996-2006). Three of these were tracked from their foraging grounds in the Gulf of California along the east coast of the Baja California peninsula to their breeding grounds in Michoacán (1337-2928 km). In addition, three post-nesting females were satellite tracked from Colola beach, Michoacán to their foraging grounds in southern Mexico and Central America (941.3-3020 km). A further six turtles were tracked in the Gulf of California within their foraging grounds giving insights into the scale of ranging behaviour. Turtles undertaking long-distance migrations showed a tendency to follow the coastline. Turtles tracked within foraging grounds showed that foraging individuals typically ranged up to 691.6 km (maximum) from release site location. Additionally, we carried out threat analysis (using the cumulative global human impact in the Eastern Pacific) clustering pre-existing satellite tracking studies from Galapagos, Costa Rica, and data obtained from this study; this indicated that turtles foraging and nesting in Central American waters are subject to the highest anthropogenic impact. Considering that turtles from all three rookeries were found to migrate towards Central America, it is highly important to implement conservation plans in Central American coastal areas to ensure the survival of the remaining green turtles in the Eastern Pacific. Finally, by combining satellite tracking data from this and previous studies, and data of tag returns we created the best available distributional patterns for this particular sea turtle species, which emphasized that conservation measures in key areas may have positive consequences on a regional scale.The work was supported by Earthwatch Institute, David and Lucile Packard Foundation, Wallace Research Foundation, PADI Foundation and the Arizona-Sonora Desert Museum. C. E. H. received a Masters degree bursary from the University of Exeter and the European Social Fund and would like to thank Consejo Nacional de Ciencia y Tecnología (Mexico) for support through a PhD scholarship. W. J. N. was supported by a Fulbright Fellowship and a Marshall Fellowship during the period field research in Baja California was conducted. B. J. G. is supported by the Darwin Initiative, European Social Fund and The Natural Environment Research Council. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript

The Importance of Self-Generation of Electricity through Controlled Recycling: a Case Study in West Sub-Saharan African Regions

Controlled recycling of different materials, typical to household appliances, from the landfills located in developing countries in West Sub-Saharan Africa and their subsequent reuse can favour the social, economic and environmental sustainability of the involved regions. This process reduces the unhealthy conditions associated with landfills and the inadequate use of fuels, and it also solves certain deficits in the population. As a continuation of previous studies, this article proposes a practical example of manufacture through the controlled reuse of an asynchronous wind-powered electricity generation system, analysing the benefits and possibilities detected, especially in domestic self-generation and in the reduction of CO2 emissions into the atmosphere. In summary, the topic is the manufacture of an energy generating system using recycled material for domestic use. In this way, the associated self-generation of electricity can supply or reduce the energy demand of a large part of the population in these regions that do not have electricity supply; for example, for a household in Nigeria, it would save between 15% and 75% of the electricity supply. Providing electricity supply also prevents deforestation in regions that use natural biomass as an alternative energy source, an issue that has a global impact on CO2 emissions into the atmosphere

Catalytic Supercritical Water Gasification of Refuse Derived Fuel for High Energy Content Fuel Gas

Refuse derived fuel (RDF) was processed using hydrothermal gasification at high temperature to obtain a high energy content fuel gas. Supercritical water gasification of RDF was conducted at a temperature of 500 °C and 29 MPa pressure and also in the presence of a solid RuO2/γ-Al2O3 catalyst. The effect of residence time (0, 30 and 60 min) and different ruthenium loadings (5, 10, 20 wt% RuO2/γ-Al2O3) were investigated. Up to 93 % carbon gasification efficiency was achieved in the presence of 20 wt% RuO2/γ-Al2O3 catalyst. The fuel gas with the highest energy value of 22.5 MJ Nm−3 was produced with the 5 wt% RuO2/γ-Al2O3 catalyst after 30 min reaction time. The results were compared with the use of NaOH as a homogeneous catalyst. When NaOH was used, the maximum gross calorific value of the product gas was 32.4 MJ Nm−3 at 60 min reaction time as a result of CO2 fixation. High yields of H2 and CH4 were obtained in the presence of both the NaOH and RuO2/γ-Al2O3 catalysts

Comparative algological and bacteriological examinations on biofilms developed on different substrata in a shallow soda lake

According to the European Water Framework Directives, benthic diatoms of lakes are a tool for ecological status assessment. In this study, we followed an integrative sample analysis approach, in order to find an appropriate substratum for the water qualification-oriented biomonitoring of a shallow soda lake, Lake Velencei. Six types of substrata (five artificial and one natural), i.e., andesite, granite, polycarbonate, old reed stems, Plexiglass discs and green reed, were sampled in May and in November. We analysed total alga and diatom composition, chlorophyll a content of the periphyton, surface tension and roughness of the substrata and carbon source utilisation of microbial communities. Water quality index was calculated based on diatom composition. Moreover, using a novel statistical tool, a self-organising map, we related algal composition to substratum types. Biofilms on plastic substrates deviated to a great extent from the stone and reed substrata, with regard to the parameters measured, whereas the biofilms developing on reed and stone substrata were quite similar. We conclude that for water quality monitoring purposes, sampling from green reed during springtime is not recommended, since this is the colonization time of periphyton on the newly growing reed, but it may be appropriate from the second half of the vegetation period. Stone and artificially placed old reed substrata may be appropriate for biomonitoring of shallow soda lakes in both spring and autumn since they showed in both seasons similar results regarding all measured features

Diagnostic amyloid proteomics: experience of the UK National Amyloidosis Centre

Systemic amyloidosis is a serious disease which is caused when normal circulating proteins misfold and aggregate extracellularly as insoluble fibrillary deposits throughout the body. This commonly results in cardiac, renal and neurological damage. The tissue target, progression and outcome of the disease depends on the type of protein forming the fibril deposit, and its correct identification is central to determining therapy. Proteomics is now used routinely in our centre to type amyloid; over the past 7 years we have examined over 2000 clinical samples. Proteomics results are linked directly to our patient database using a simple algorithm to automatically highlight the most likely amyloidogenic protein. Whilst the approach has proved very successful, we have encountered a number of challenges, including poor sample recovery, limited enzymatic digestion, the presence of multiple amyloidogenic proteins and the identification of pathogenic variants. Our proteomics procedures and approaches to resolving difficult issues are outlined