COMPETITIVE STRATEGIES OF BIOTECHNOLOGY FIRMS: IMPLICATIONS FOR U.S. AGRICULTURE

The agricultural biotechnology industry has evolved from a focus on outstanding science to a more mature phase where firms focus on near-term products and building businesses. Understanding complex relationships and distribution channels and a global perspective are crucial to commercialization. Yet, leading-edge technology and early identification of key traits will be critical to developing superior products that ensure competitiveness in the marketplace. Monsanto is organizing around a life sciences model where seed, crop chemicals, pharmaceuticals, and food ingredient businesses will exploit mutual synergies driven by basic science and discovery.Biotechnology, Monsanto, Strategies, Research and Development/Tech Change/Emerging Technologies,

Analysis of strain IRB-1 as a potential candidate for uranium bioremediation in an extreme environment [abstract]

Abstract only availableSoap Lake, a halo-alkaline meromictic lake, in central Washington State is host to a variety of microorganisms capable of growth in these extreme conditions. These microorganisms have been shown to play a central role in geochemical cycling of the lake. In particular, an isolate designated strain IRB-1, a sulfur- and iron-reducing obligately anaerobic bacterium, exhibits qualities that may be beneficial for bioremediation in highly alkaline and saline environments found in contaminated industrial sites and some water systems. Strain IRB-1 was cultivated in batch cultures under anaerobic conditions in a medium that simulated site geochemistry. The original cultures were grow at a pH of 9.5, 1.2M NaCl, 60mM lactate, and 2mM Fe(III)-citrate as an electron acceptor. In all cultures growth was observed through increased protein biomass and reduction of Fe(III) over time. Scanning electron microscopy was used to analyze planktonic and biofilm cultures of IRB-1. The electron micrographs depicted the presence of extracellular appendages extending into the substrate and creating cell to cell connections. The original medium was modified by altering the terminal electron acceptor to 50mM of either sulfate, sulfite, thiosulfate, or elemental sulfur to determine the metabolic flexibility of the organism. Growth was observed only in cultures containing sulfur and thiosulfate and was confirmed over the span of several subcultures. We infer from the ability of IRB-1 to reduce Fe(III), thiosulfate, and sulfur that it may also have the ability to reduce heavy metals, specifically U(VI). Experiments are currently underway to determine the capacity of IRB-1 to grow in the presence of and/or reduce 2mM U(VI) as the sole terminal electron acceptor. Should this bacterium have the capability to reduce U(VI) and other heavy metals, it would become a candidate for bioremediation efforts in saline and highly alkaline environments where organisms traditionally employed for bioremediation can not be used.Department of Energy Genomics: Genomes to Life Progra

Odor naming and interpretation performance in 881 schizophrenia subjects: association with clinical parameters

BACKGROUND: Olfactory function tests are sensitive tools for assessing sensory-cognitive processing in schizophrenia. However, associations of central olfactory measures with clinical outcome parameters have not been simultaneously studied in large samples of schizophrenia patients. METHODS: In the framework of the comprehensive phenotyping of the GRAS (Göttingen Research Association for Schizophrenia) cohort, we modified and extended existing odor naming (active memory retrieval) and interpretation (attribute assignment) tasks to evaluate them in 881 schizophrenia patients and 102 healthy controls matched for age, gender and smoking behavior. Associations with emotional processing, neuropsychological test performance and disease outcome were studied. RESULTS: Schizophrenia patients underperformed controls in both olfactory tasks. Odor naming deficits were primarily associated with compromised cognition, interpretation deficits with positive symptom severity and general alertness. Contrasting schizophrenia extreme performers of odor interpretation (best versus worst percentile; N=88 each) and healthy individuals (N=102) underscores the obvious relationship between impaired odor interpretation and psychopathology, cognitive dysfunctioning, and emotional processing (all p<0.004). CONCLUSIONS: The strong association of performance in higher olfactory measures, odor naming and interpretation, with lead symptoms of schizophrenia and determinants of disease severity highlights their clinical and scientific significance. Based on the results obtained here in an exploratory fashion in a large patient sample, the development of an easy-to-use clinical test with improved psychometric properties may be encouraged

The importance of initial-final state correlations for the formation of fragments in heavy ion collisions

Using quantum molecular dynamics simulations, we investigate the formation of fragments in symmetric reactions between beam energies of E=30AMeV and 600AMeV. After a comparison with existing data we investigate some observables relevant to tackle equilibration: dsigma/dErat, the double differential cross section dsigma/pt.dpz.dpt,... Apart maybe from very energetic E>400AMeV and very central reactions, none of our simulations gives evidence that the system passes through a state of equilibrium. Later, we address the production mechanisms and find that, whatever the energy, nucleons finally entrained in a fragment exhibit strong initial-final state correlations, in coordinate as well as in momentum space. At high energy those correlations resemble the ones obtained in the participant-spectator model. At low energy the correlations are equally strong, but more complicated; they are a consequence of the Pauli blocking of the nucleon-nucleon collisions, the geometry, and the excitation energy. Studying a second set of time-dependent variables (radii, densities,...), we investigate in details how those correlations survive the reaction especially in central reactions where the nucleons have to pass through the whole system. It appears that some fragments are made of nucleons which were initially correlated, whereas others are formed by nucleons scattered during the reaction into the vicinity of a group of previously correlated nucleons.Comment: 45 pages text + 20 postscript figures Accepted for publication in Physical Review

A benzene interference single-electron transistor

Interference effects strongly affect the transport characteristics of a benzene single-electron transistor (SET) and for this reason we call it interference SET (I-SET). We focus on the effects of degeneracies between many-body states of the isolated benzene. We show that the particular current blocking and selective conductance suppression occurring in the benzene I-SET are due to interference effects between the orbitally degenerate states. Further we study the impact of reduced symmetry due to anchor groups or potential drop over the molecule. We identify in the quasi-degeneracy of the involved molecular states the necessary condition for the robustness of the results.Comment: 17pages, 9 figures, revised versio

A Streamlined Strategy for Biohydrogen Production with Halanaerobium hydrogeniformans, an Alkaliphilic Bacterium

Biofuels are anticipated to enable a shift from fossil fuels for renewable transportation and manufacturing fuels, with biohydrogen considered attractive since it could offer the largest reduction of global carbon budgets. Currently, lignocellulosic biohydrogen production remains inefficient with pretreatments that are heavily fossil fuel-dependent. However, bacteria using alkali-treated biomass could streamline biofuel production while reducing costs and fossil fuel needs. An alkaliphilic bacterium, Halanaerobium hydrogeniformans, is described that is capable of biohydrogen production at levels rivaling neutrophilic strains, but at pH 11 and hypersaline conditions. H. hydrogeniformans ferments a variety of 5- and 6-carbon sugars derived from hemicellulose and cellulose including cellobiose, and forms the end products hydrogen, acetate, and formate. Further, it can also produce biohydrogen from switchgrass and straw pretreated at temperatures far lower than any previously reported and in solutions compatible with growth. Hence, this bacterium can potentially increase the efficiency and efficacy of biohydrogen production from renewable biomass resources

Measuring Dust Production in the Small Magellanic Cloud Core-Collapse Supernova Remnant 1E 0102.2-7219

We present mid-infrared spectral mapping observations of the core-collapse supernova remnant 1E 0102.2-7219 in the Small Magellanic Cloud using the InfraRed Spectrograph (IRS) on the Spitzer Space Telescope. The remnant shows emission from fine structure transitions of neon and oxygen as well as continuum emission from dust. Comparison of the mid-IR dust emission with observations at x-ray, radio and optical wavelengths shows that the dust is associated with the supernova ejecta and is thus newly formed in the remnant. The spectrum of the newly formed dust is well reproduced by a model that includes 3x10^-3 solar masses of amorphous carbon dust at 70 K and 2x10^-5 solar masses of Mg2SiO4 (forsterite) at 145 K. Our observations place a lower limit on the amount of dust in the remnant since we are not sensitive to the cold dust in the unshocked ejecta. We compare our results to observations of other core-collapse supernovae and remnants, particularly Cas A where very similar spectral mapping observations have been carried out. We observe a a factor of ~10 less dust in E 0102 than seen in Cas A, although the amounts of amorphous carbon and forsterite are comparable.Comment: submitted to Ap

Addressing the ‘hypoxia paradox’ in severe COVID-19: literature review and report of four cases treated with erythropoietin analogues

Background: Since fall 2019, SARS-CoV-2 spread world-wide, causing a major pandemic with estimated ~ 220 million subjects affected as of September 2021. Severe COVID-19 is associated with multiple organ failure, particularly of lung and kidney, but also grave neuropsychiatric manifestations. Overall mortality reaches > 2%. Vaccine development has thrived in thus far unreached dimensions and will be one prerequisite to terminate the pandemic. Despite intensive research, however, few treatment options for modifying COVID-19 course/outcome have emerged since the pandemic outbreak. Additionally, the substantial threat of serious downstream sequelae, called ‘long COVID’ and ‘neuroCOVID’, becomes increasingly evident. Main body of the abstract: Among candidates that were suggested but did not yet receive appropriate funding for clinical trials is recombinant human erythropoietin. Based on accumulating experimental and clinical evidence, erythropoietin is expected to (1) improve respiration/organ function, (2) counteract overshooting inflammation, (3) act sustainably neuroprotective/neuroregenerative. Recent counterintuitive findings of decreased serum erythropoietin levels in severe COVID-19 not only support a relative deficiency of erythropoietin in this condition, which can be therapeutically addressed, but also made us coin the term ‘hypoxia paradox’. As we review here, this paradox is likely due to uncoupling of physiological hypoxia signaling circuits, mediated by detrimental gene products of SARS-CoV-2 or unfavorable host responses, including microRNAs or dysfunctional mitochondria. Substitution of erythropoietin might overcome this ‘hypoxia paradox’ caused by deranged signaling and improve survival/functional status of COVID-19 patients and their long-term outcome. As supporting hints, embedded in this review, we present 4 male patients with severe COVID-19 and unfavorable prognosis, including predicted high lethality, who all profoundly improved upon treatment which included erythropoietin analogues. Short conclusion: Substitution of EPO may—among other beneficial EPO effects in severe COVID-19—circumvent downstream consequences of the ‘hypoxia paradox’. A double-blind, placebo-controlled, randomized clinical trial for proof-of-concept is warrante

Breakup Density in Spectator Fragmentation

Proton-proton correlations and correlations of protons, deuterons and tritons with alpha particles from spectator decays following 197Au + 197Au collisions at 1000 MeV per nucleon have been measured with two highly efficient detector hodoscopes. The constructed correlation functions, interpreted within the approximation of a simultaneous volume decay, indicate a moderate expansion and low breakup densities, similar to assumptions made in statistical multifragmentation models. PACS numbers: 25.70.Pq, 21.65.+f, 25.70.Mn, 25.75.GzComment: 11 pages, LaTeX with 3 included figures; Also available from http://www-kp3.gsi.de/www/kp3/aladin_publications.htm