Enchytraeids and nitrogen : the effects of nitrogen on enchytraeid populations and the influence of enchytraeids on nitrogen translocation in soil

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High cadence observations of a global coronal wave by EUVI/STEREO

We report a large-scale coronal wave (so-called "EIT wave") observed with high cadence by EUVI onboard STEREO in association with the GOES B9.5 flare and double CME event on 19 May 2007. The EUVI instruments provide us with the unprecedented opportunity to study the {\it dynamics} of flare/CME associated coronal waves imaged in the extreme ultraviolet. The coronal wave under study reveals deceleration, indicative of a freely propagating MHD wave. Complementary analysis of the associated flare and erupting filament/CME hint at wave initiation by the CME expanding flanks, which drive the wave only over a limited distance. The associated flare is very weak and occurs too late to account for the wave initiation.Comment: Astrophysical Journal Letters (in press

Development of Antibacterial Steel Surfaces Through Laser Texturing

[Abstract] The aim of the present study was to develop novel antibacterial touch surfaces through the laser texturing optimization of stainless steel. A wide range of laser fluence (2.11 J/cm2–5.64 J/cm2) and scanning interval (10 µm–30 μm) parameters were explored. The impact of surfaces with different patterns, wettability, and oxidation states on the antimicrobial behavior of Escherichia coli K-12 and biofilm hyper-producing Acinetobacter baumannii MAR002 was assessed. Modification of laser input enacted topographical changes with high scanning intervals leading to ordered surface patterns, while increasing the laser fluence to 5.64 J/cm2 created larger and less ordered plateaus and valleys. Texturing also drove a transition from a hydrophilic starting surface with a contact angle of 80.67° ± 3.35° to hydrophobic (138°–148°). Antimicrobial analysis and bioluminescence assays of E. coli, alongside biofilm forming test through A. baumannii MAR002 indicated the ability of laser texturing to produce effective bactericidal touch surfaces. No simple correlation was found between wettability and bacterial behavior, revealing that proliferation is dependent on roughness, oxidation, and wettability. For the conditions selected in this study, a laser fluence of 5.64 J/cm2 and a scanning interval of 10 µm showcased the lowest amount of recovered bacteria after 30 min.This research was supported by Project Nos. 592 p-01216A and IJCI-2016-29524 (awarded to A.P.G.), funded by the Spanish Society of Infectious Diseases and Clinical Microbiology (SEIMC) and MINECO, respectively. This manuscript is part of Process Design to Prevent Prosthetic Infections (Grant No. EP/P02341X/1)Sociedad Española de Enfermedades Infecciosas y Microbiología Clínica; 592 p-01216AReino Unido. Engineering and Physical Sciences Research Council; EP/P02341X/

Trapping an Iron(VI) Water-Splitting Intermediate in Nonaqueous Media

We report in situ spectroscopic measurements in nonaqueous media designed to trap an exceptionally strong oxidant generated electrochemically from an iron-containing nickel layered double hydroxide ([NiFe]-LDH) material. Anodic polarization of this material in acetonitrile produces metal-oxo vibrational spectroscopic signatures along with an extremely narrow near-infrared luminescence peak that strongly indicate that the reactive intermediate is cis-dioxo-iron(VI). Chemical trapping experiments reveal that addition of H_2O to the polarized electrochemical cell produces hydrogen peroxide; and, most importantly, addition of HO– generates oxygen. Repolarization of the electrode restores the iron(VI) spectroscopic features, confirming that the high-valent oxo complex is active in the electrocatalytic water oxidation cycle

Trapping an Iron(VI) Water-Splitting Intermediate in Nonaqueous Media

We report in situ spectroscopic measurements in nonaqueous media designed to trap an exceptionally strong oxidant generated electrochemically from an iron-containing nickel layered double hydroxide ([NiFe]-LDH) material. Anodic polarization of this material in acetonitrile produces metal-oxo vibrational spectroscopic signatures along with an extremely narrow near-infrared luminescence peak that strongly indicate that the reactive intermediate is cis-dioxo-iron(VI). Chemical trapping experiments reveal that addition of H_2O to the polarized electrochemical cell produces hydrogen peroxide; and, most importantly, addition of HO– generates oxygen. Repolarization of the electrode restores the iron(VI) spectroscopic features, confirming that the high-valent oxo complex is active in the electrocatalytic water oxidation cycle

Genome-wide association study of chronic sputum production implicates loci involved in mucus production and infection

Background: chronic sputum production impacts on quality of life and is a feature of many respiratory diseases. Identification of the genetic variants associated with chronic sputum production in a disease agnostic sample could improve understanding of its causes and identify new molecular targets for treatment.Methods: we conducted a genome-wide association study (GWAS) of chronic sputum production in UK Biobank. Signals meeting genome-wide significance (p<5×10−8) were investigated in additional independent studies, were fine-mapped and putative causal genes identified by gene expression analysis. GWASs of respiratory traits were interrogated to identify whether the signals were driven by existing respiratory disease among the cases and variants were further investigated for wider pleiotropic effects using phenome-wide association studies (PheWASs).Results: from a GWAS of 9714 cases and 48 471 controls, we identified six novel genome-wide significant signals for chronic sputum production including signals in the human leukocyte antigen (HLA) locus, chromosome 11 mucin locus (containing MUC2, MUC5AC and MUC5B) and FUT2 locus. The four common variant associations were supported by independent studies with a combined sample size of up to 2203 cases and 17 627 controls. The mucin locus signal had previously been reported for association with moderate-to-severe asthma. The HLA signal was fine-mapped to an amino acid change of threonine to arginine (frequency 36.8%) in HLA-DRB1 (HLA-DRB1*03:147). The signal near FUT2 was associated with expression of several genes including FUT2, for which the direction of effect was tissue dependent. Our PheWAS identified a wide range of associations including blood cell traits, liver biomarkers, infections, gastrointestinal and thyroid-associated diseases, and respiratory disease.Conclusions: novel signals at the FUT2 and mucin loci suggest that mucin fucosylation may be a driver of chronic sputum production even in the absence of diagnosed respiratory disease and provide genetic support for this pathway as a target for therapeutic intervention

Hundreds of variants clustered in genomic loci and biological pathways affect human height

Most common human traits and diseases have a polygenic pattern of inheritance: DNA sequence variants at many genetic loci influence the phenotype. Genome-wide association (GWA) studies have identified more than 600 variants associated with human traits, but these typically explain small fractions of phenotypic variation, raising questions about the use of further studies. Here, using 183,727 individuals, we show that hundreds of genetic variants, in at least 180 loci, influence adult height, a highly heritable and classic polygenic trait. The large number of loci reveals patterns with important implications for genetic studies of common human diseases and traits. First, the 180 loci are not random, but instead are enriched for genes that are connected in biological pathways (P = 0.016) and that underlie skeletal growth defects (P < 0.001). Second, the likely causal gene is often located near the most strongly associated variant: in 13 of 21 loci containing a known skeletal growth gene, that gene was closest to the associated variant. Third, at least 19 loci have multiple independently associated variants, suggesting that allelic heterogeneity is a frequent feature of polygenic traits, that comprehensive explorations of already-discovered loci should discover additional variants and that an appreciable fraction of associated loci may have been identified. Fourth, associated variants are enriched for likely functional effects on genes, being over-represented among variants that alter amino-acid structure of proteins and expression levels of nearby genes. Our data explain approximately 10% of the phenotypic variation in height, and we estimate that unidentified common variants of similar effect sizes would increase this figure to approximately 16% of phenotypic variation (approximately 20% of heritable variation). Although additional approaches are needed to dissect the genetic architecture of polygenic human traits fully, our findings indicate that GWA studies can identify large numbers of loci that implicate biologically relevant genes and pathways.

Impact of simulated nitrogen pollution on heathland microfauna, mesofauna and plants

Deposition of reactive nitrogen derived from intensive agriculture and industrial processes is a major threat to biodiversity and ecosystem services around the world; however our knowledge of the impacts of nitrogen is restricted to a very limited range of organisms. Here we examine the response of groups of microfauna (testate amoebae), mesofauna (enchytraeid worms) and plants to ammonium nitrate application in the Ruabon heathland long-term experiment. Plant data showed significant differences between treatments, particularly characterised by a loss of bryophytes in nitrogen-treated plots, by contrast enchytraeids showed a non-significant increase in abundance in response to treatment. Testate amoebae showed no significant changes in abundance or inferred biomass but significant changes in community structure with a reduced abundance of Corythion dubium, interpreted as a response to the loss of bryophytes. Our results suggest that simple indices of plant community may have value for bioindication while the bioindication value of testate amoebae and enchytraeids is not clearly demonstrated