Optical Satellite Remote Sensing of the Coastal Zone Environment — An Overview

Optical remote-sensing data are a powerful source of information for monitoring the coastal environment. Due to the high complexity of coastal environments, where different natural and anthropogenic phenomenon interact, the selection of the most appropriate sensor(s) is related to the applications required, and the different types of resolutions available (spatial, spectral, radiometric, and temporal) need to be considered. The development of specific techniques and tools based on the processing of optical satellite images makes possible the production of information useful for coastal environment management, without any destructive impacts. This chapter will highlight different subjects related to coastal environments: shoreline change detection, ocean color, water quality, river plumes, coral reef, alga bloom, bathymetry, wetland mapping, and coastal hazards/vulnerability. The main objective of this chapter is not an exhaustive description of the image processing methods/algorithms employed in coastal environmental studies, but focus in the range of applications available. Several limitations were identified. The major challenge still is to have remote-sensing techniques adopted as a routine tool in assessment of change in the coastal zone. Continuing research is required into the techniques employed for assessing change in the coastal environment

Quantification of the total suspended matter concentration in the sea breaking zone from in situ measurements and remotely sensed data - two empirical approaches

Remote sensing techniques can be used to calculate suspended sediment concentrations and to understand the flux and distribution of sediments driven by mechanisms such as tides and waves, river discharges, etc. The main objective of this study is the quantification of the Total Suspended Matter (TSM) concentration in the sea breaking zone for a particular area of the Portuguese coast, around Aveiro. The methodology used was based on in situ measurements and multi spectral satellite images. In situ experimental techniques (maritime platform, aerial platform, simulation on the beach and water sample collection in the breaking zone) were used to determine a relationship between the TSM concentration and the seawater reflectance in the breaking zone. Spectral reflectance was measured with a spectroradiometer and water samples were simultaneously collected. Empirical relationships were established between TSM concentration and the equivalent reflectance values for sensors SPOT/HRVIR, TERRA/ASTER and Landsat/TM at visible and Near Infra Red (NIR) bands computed from the experimental data. Satellite images from ASTER, SPOT HRVIR and Landsat TM were used together with the same empirical models. These satellite images were calibrated and atmospherically corrected. Equations of linear, polynomial, logarithmic, power and exponential models were tested for the satellite image bands on the visible and near infrared. The coefficients of determination (R-2) were also calculated for each model. The results obtained from the two approaches, in situ measurements and directly from the multi spectral satellite images, were analysed

Semi-Automatization of Support Vector Machines to Map Lithium (Li) Bearing Pegmatites

Machine learning (ML) algorithms have shown great performance in geological remote sensing applications. The study area of this work was the Fregeneda–Almendra region (Spain–Portugal) where the support vector machine (SVM) was employed. Lithium (Li)-pegmatite exploration using satellite data presents some challenges since pegmatites are, by nature, small, narrow bodies. Consequently, the following objectives were defined: (i) train several SVM’s on Sentinel-2 images with different parameters to find the optimal model; (ii) assess the impact of imbalanced data; (iii) develop a successful methodological approach to delineate target areas for Li-exploration. Parameter optimization and model evaluation was accomplished by a two-staged grid-search with cross-validation. Several new methodological advances were proposed, including a region of interest (ROI)-based splitting strategy to create the training and test subsets, a semi-automatization of the classification process, and the application of a more innovative and adequate metric score to choose the best model. The proposed methodology obtained good results, identifying known Li-pegmatite occurrences as well as other target areas for Li-exploration. Also, the results showed that the class imbalance had a negative impact on the SVM performance since known Li-pegmatite occurrences were not identified. The potentials and limitations of the methodology proposed are highlighted and its applicability to other case studies is discussed.The authors would like to thank the financial support provided by FCT—Fundação para a Ciência e a Tecnologia, I.P., with the ERA-MIN/0001/2017—LIGHTS project. The work was also supported by National Funds through the FCT project UIDB/04683/2020—ICT (Institute of Earth Sciences). Joana Cardoso-Fernandes is financially supported within the compass of a Ph.D. Thesis, ref. SFRH/BD/136108/2018, by national funds from MCTES through FCT, and co-financed by the European Social Fund (ESF) through POCH—Programa Operacional Capital Humano. The Spanish Ministerio de Ciencia, Innovacion y Universidades (Project RTI2018-094097-B-100, with ERDF funds) and the University of the Basque Country (UPV/EHU) (grant GIU18/084) also contributed economically

Editorial: Macrophages role in integrating tissue Signals and Biological Processes in Chronic inflammation and Fibrosis

Univ Sao Paulo, Immunol Dept, Sao Paulo, BrazilINSERM, Paris, FranceUniv Fed Sao Paulo, Nephrol Div, Med Dept, Sao Paulo, BrazilUniv Sao Paulo, Renal Physiol Lab, Fac Med, Sao Paulo, BrazilUniv Fed Sao Paulo, Nephrol Div, Med Dept, Sao Paulo, BrazilWeb of Scienc

Berberine reverts hepatic mitochondrial dysfunction in high-fat fed rats: A possible role for SirT3 activation

Berberine is an isoquinoline alkaloid with anti-diabetic properties. Despite the central role of liver and thus hepaticmitochondria inwhole-bodymetabolism, berberine effects on hepaticmitochondrial function in an obesity model are still unknown. Here, we demonstrate that berberine treatment recovers mitochondrial efficiency when altered by a high-fat feeding.Mitochondria isolated from the liver of high-fat fed rats exhibited decreased capacity to accumulate calcium and impaired oxidative phosphorylation (OXPHOS) capacity, as shown by impaired mitochondrialmembrane potential, oxygen consumption and cellular ATP levels. Interestingly, the recovery of mitochondrial function by berberine was associated with an increased activity of the mitochondrial sirtuin 3 (SirT3). In conclusion, berberine potent protective effects against metabolic syndrome may rely on increasing mitochondrial SirT3 activity, normalizing mitochondrial function and preventing a state of energetic deficit caused by impaired OXPHOS.JST, FVD, APG and ATV were recipients of a Fundação para a Ciência e a Tecnologia PhD scholarship (SFRH/BD/38467/2007, SFRH/BD/38372/ 2007, SFRH/BD/44674/2008 and SFRH/BD/44796/2008, respectively). This project was supported by a FCT grant PTCD/SAU-OSM/72443/ 2006

Peripheral axonal ensheathment is regulated by RalA GTPase and the exocyst complex

Funding This work was supported by H2020 Marie Skłodowska-Curie Actions [H2020- GA661543-Neuronal Trafficking to R.O.T.], Fundo Regional para a Ciência e Tecnologia [IF/00392/2013/CP1192/CT0002 to R.O.T.] and iNOVA4Health (UID/Multi/04462/2013) (co-funded by FCT-FEDER-PT2020).Axon ensheathment is fundamental for fast impulse conduction and the normal physiological functioning of the nervous system. Defects in axonal insulation lead to debilitating conditions, but, despite its importance, the molecular players responsible are poorly defined. Here, we identify RalA GTPase as a key player in axon ensheathment in Drosophila larval peripheral nerves. We demonstrate through genetic analysis that RalA action through the exocyst complex is required in wrapping glial cells to regulate their growth and development. We suggest that the RalA-exocyst pathway controls the targeting of secretory vesicles for membrane growth or for the secretion of a wrapping glia-derived factor that itself regulates growth. In summary, our findings provide a new molecular understanding of the process by which axons are ensheathed in vivo, a process that is crucial for normal neuronal function.publishersversionpublishe

Microwave-Driven Hexagonal-to-Monoclinic Transition in BiPO4: An In-Depth Experimental Investigation and First-Principles Study

Present theoretical and experimental work provides an in-depth understanding of the morphological, structural, electronic, and optical properties of hexagonal and monoclinic polymorphs of bismuth phosphate (BiPO4). Herein, we demonstrate how microwave irradiation induces the transformation of a hexagonal phase to a monoclinic phase in a short period of time and, thus, the photocatalytic performance of BiPO4. To complement and rationalize the experimental results, first-principles calculations have been performed within the framework of density functional theory. This was aimed at obtaining the geometric, energetic, and structural parameters as well as vibrational frequencies; further, the electronic properties (band structure diagram and density of states) of the bulk and corresponding surfaces of both the hexagonal and monoclinic phases of BiPO4 were also acquired. A detailed characterization of the low vibrational modes of both the hexagonal and monoclinic polymorphs is key to explaining the irreversible phase transformation from hexagonal to monoclinic. On the basis of the calculated values of the surface energies, a map of the available morphologies of both phases was obtained by using Wulff construction and compared to the observed scanning electron microscopy images. The BiPO4 crystals obtained after 16–32 min of microwave irradiation provided excellent photodegradation of Rhodamine B under visible-light irradiation. This enhancement was found to be related to the surface energy and the types of clusters formed on the exposed surfaces of the morphology. These findings provide details of the hexagonal-to-monoclinic phase transition in BiPO4 during microwave irradiation; further, the results will assist in the design of electronic devices with higher efficiency and reliability

Tools for Remote Exploration: A Lithium (Li) Dedicated Spectral Library of the Fregeneda–Almendra Aplite–Pegmatite Field

The existence of diagnostic features in the visible and infrared regions makes it possible to use reflectance spectra not only to identify mineral assemblages but also for calibration and classification of satellite images, considering lithological and/or mineral mapping. For this purpose, a consistent spectral library with the target spectra of minerals and rocks is needed. Currently, there is big market pressure for raw materials including lithium (Li) that has driven new satellite image applications for Li exploration. However, there are no reference spectra for petalite (a Li mineral) in large, open spectral datasets. In this work, a spectral library was built exclusively dedicated to Li minerals and Li pegmatite exploration through satellite remote sensing. The database includes field and laboratory spectra collected in the Fregeneda–Almendra region (Spain–Portugal) from (i) distinct Li minerals (spodumene, petalite, lepidolite); (ii) several Li pegmatites and other outcropping lithologies to allow satellite-based lithological mapping; (iii) areas previously misclassified as Li pegmatites using machine learning algorithms to allow comparisons between these regions and the target areas. Ancillary data include (i) sample location and coordinates, (ii) sample conditions, (iii) sample color, (iv) type of face measured, (v) equipment used, and for the laboratory spectra, (vi) sample photographs, (vii) continuum removed spectra files, and (viii) statistics on the main absorption features automatically extracted. The potential future uses of this spectral library are reinforced by its major advantages: (i) data is provided in a universal file format; (ii) it allows users to compare field and laboratory spectra; (iii) a large number of complementary data allow the comparison of shape, asymmetry, and depth of the absorption features of the distinct Li minerals.The authors are grateful for the financial support provided by FCT– Fundação para a Ciência e a Tecnologia, I.P., through the ERA-MIN/0001/2017–LIGHTS project and also the 869274–GREENPEG–H2020-SC5-2018-2019-2020 project. The work was also supported by National Funds through the FCT project UIDB/04683/2020–ICT (Institute of Earth Sciences). Joana Cardoso-Fernandes and Filipa Dias are financially supported within the compass of their respective Ph.D. theses, ref. SFRH/BD/136108/2018 and ref. 2020.05534.BD, by national funds from MCTES through FCT, and cofinanced by the European Social Fund (ESF) through POCH—Programa Operacional Capital Humano—and NORTE 2020 regional program. The Spanish Ministerio de Ciencia, Innovacion y Universidades (Project RTI2018-094097-B-100, with ERDF funds) and the University of the Basque Country (UPV/EHU) (grant GIU18/084) also contributed economically. The French National Research Agency (ANR–10–LABX 21–LABEX RESSOURCES 21) partly supported Master Student personal grant and the 776804–NEXT– H2020-SC5-2017 project participated to equipment purchase

Collagen V-induced nasal tolerance downregulates pulmonary collagen mRNA gene and TGF-beta expression in experimental systemic sclerosis

<p>Abstract</p> <p>Background</p> <p>The purpose of this study was to evaluate collagen deposition, mRNA collagen synthesis and TGF-beta expression in the lung tissue in an experimental model of scleroderma after collagen V-induced nasal tolerance.</p> <p>Methods</p> <p>Female New Zealand rabbits (N = 12) were immunized with 1 mg/ml of collagen V in Freund's adjuvant (IM). After 150 days, six immunized animals were tolerated by nasal administration of collagen V (25 μg/day) (IM-TOL) daily for 60 days. The collagen content was determined by morphometry, and mRNA expressions of types I, III and V collagen were determined by Real-time PCR. The TGF-beta expression was evaluated by immunostaining and quantified by point counting methods. To statistic analysis ANOVA with Bonferroni test were employed for multiple comparison when appropriate and the level of significance was determined to be <it>p </it>< 0.05.</p> <p>Results</p> <p>IM-TOL, when compared to IM, showed significant reduction in total collagen content around the vessels (0.371 ± 0.118 vs. 0.874 ± 0.282, <it>p </it>< 0.001), bronchioles (0.294 ± 0.139 vs. 0.646 ± 0.172, <it>p </it>< 0.001) and in the septal interstitium (0.027 ± 0.014 vs. 0.067 ± 0.039, <it>p </it>= 0.026). The lung tissue of IM-TOL, when compared to IM, showed decreased immunostaining of types I, III and V collagen, reduced mRNA expression of types I (0.10 ± 0.07 vs. 1.0 ± 0.528, p = 0.002) and V (1.12 ± 0.42 vs. 4.74 ± 2.25, p = 0.009) collagen, in addition to decreased TGF-beta expression (p < 0.0001).</p> <p>Conclusions</p> <p>Collagen V-induced nasal tolerance in the experimental model of SSc regulated the pulmonary remodeling process, inhibiting collagen deposition and collagen I and V mRNA synthesis. Additionally, it decreased TGF-beta expression, suggesting a promising therapeutic option for scleroderma treatment.</p

Biocompatible Bacterial Cellulose-Poly(2-hydroxyethyl methacrylate) Nanocomposite Films

A series of bacterial cellulose-poly(2-hydroxyethyl methacrylate) nanocomposite films was prepared by in situ radical polymerization of 2-hydroxyethyl methacrylate (HEMA), using variable amounts of poly(ethylene glycol) diacrylate (PEGDA) as crosslinker. Thin films were obtained, and their physical, chemical, thermal, and mechanical properties were evaluated. The films showed improved translucency compared to BC and enhanced thermal stability and mechanical performance when compared to poly(2-hydroxyethyl methacrylate) (PHEMA). Finally, BC/PHEMA nanocomposites proved to be nontoxic to human adipose-derived mesenchymal stem cells (ADSCs) and thus are pointed as potential dry dressings for biomedical applications