Meeting in the Middle: The Impact of Single-Party Dominance on Partisan Politics

Polarization within the American government has reached near historic levels in recent decades. One of the most readily apparent results of this partisan atmosphere is the increase in the number of American states that are almost totally controlled by one of the two major political parties. This study seeks to examine the effect this single-party domination has on the policy positions of Senate candidates of the minority parties in these states. It is hypothesized that minority party candidates seeking election in these states will be more likely to adopt policy positions more commonly associated with the platforms of the majority party in an effort to remain viable, leading to increased levels of political homogeneity. In an effort to measure these policy deviations, the campaign websites of Senate candidates for each state over three elections will be examined, and positions regarding five typically polarized issues will be recorded. These positions will then be compared to the official platforms of the two parties’ national organizations. Candidates will be scored on a party loyalty scale according to their adherence to or deviation from their party’s official position. Using these scores, candidates from single-party dominated states will be compared to their counterparts from more competitive states to gain a clearer picture of the true nature of political competition

Nitrogen-bridged, natural product-like octahydrobenzofurans and octahydroindoles: scope and mechanism of bridge-forming reductive amination via caged heteroadamantanes

The biological significance of sp3-rich synthetic scaffolds with natural product-like features yet distinct global frameworks is being increasingly recognised in medicinal chemistry and biochemistry. Taking inspiration from the vast array of bioactive, bridged alkaloids, we report the synthesis of unique, densely functionalised tricyclic scaffolds based on nitrogen-bridged, octahydrobenzofurans and octahydroindoles. These heterocycle-rich frameworks were assembled by a one-pot, two-step bridge-forming reductive amination process, which was shown to proceed via caged, heteroadamantane intermediates that thermodynamically drive an exo–endo epimerisation, enabling intramolecular azaMichael addition over the concave face of the fused bicyclic precursors. In addition to evaluating the scope of this aza bridge-forming reaction, further stereochemical complexity was introduced by subsequent diastereoselective ketone reductions and other manipulations. Finally, strategic diversity points (amino, carboxy) were decorated with common medicinal chemistry fragments, providing a set of exemplar derivatives with Lipinski compliant physicochemical properties

Landscapes of Science

This edited collection brings together six original essays that explore the intersections of environmental history, history of science, and history of technology. Five of these essays first appeared as blog articles in 2015 on The Otter~La loutre. They appear in this collection with an additional chapter, new preface and conclusion

The Role and Responsibility of Traditional Media

When high profile legal issues arise, the traditional media attempts a familiar balancing act, weighing ethical obligations of fairness, accuracy and objectivity against the necessity for timely and competitive reporting. This mission, in itself, requires careful execution. But there is significantly more pressure in recent years, due to a voracious 24-hour news cycle, competition by new media entities that have high-tech speed and occasionally choose to remain unfettered by journalistic ethics, and challenging economic realities. In Panel #1: The Role and Responsibility of Traditional Media, moderator Sara Beale, the Charles L. B. Lowndes Professor of Law at Duke University School of Law, talks with a panel of veteran reporters, journalism academics, and experts in the legal side of journalism. The far-ranging discussion covers the basic tenets of journalistic ethics, famous journalistic controversies, and the difficulties faced by print reporters who increasingly have to cover more ground with fewer resources. Questions/themes/discussion topics Balancing speed and accuracy The effect of smaller newsrooms and fewer reporters, especially in the world of print journalism Resisting manipulation by sources Media criticism, from ombudsmen to bloggers Historically bad journalism, from McCarthyism to Jayson Blai

Secret key distillation across a quantum wiretap channel under restricted eavesdropping

The theory of quantum cryptography aims to guarantee unconditional information-theoretic security against an omnipotent eavesdropper. In many practical scenarios, however, the assumption of an all-powerful adversary is excessive and can be relaxed considerably. In this paper we study secret key distillation across a lossy and noisy quantum wiretap channel between Alice and Bob, with a separately parameterized realistically lossy quantum channel to the eavesdropper Eve. We show that under such restricted eavesdropping, the key rates achievable can exceed the secret key distillation capacity against an unrestricted eavesdropper in the quantum wiretap channel. Further, we show upper bounds on the key rates based on the relative entropy of entanglement. This simple restricted eavesdropping model is widely applicable, e.g., to free-space quantum optical communication, where realistic collection of light by Eve is limited by the finite size of her optical aperture. Future work will include calculating bounds on the amount of light Eve can collect under various realistic scenarios.Comment: 14 pages, 19 figures. We welcome comments and suggestion

Trends and emissions of six perfluorocarbons in the Northern Hemisphere and Southern Hemisphere

Perfluorocarbons (PFCs) are potent greenhouse gases with global warming potentials up to several thousand times greater than CO2 on a 100-year time horizon. The lack of any significant sinks for PFCs means that they have long atmospheric lifetimes of the order of thousands of years. Anthropogenic production is thought to be the only source for most PFCs. Here we report an update on the global atmospheric abundances of the following PFCs, most of which have for the first time been analytically separated according to their isomers: c-octafluorobutane (c-C4F8), n-decafluorobutane (n-C4F10), n-dodecafluoropentane (n-C5F12), n-tetradecafluorohexane (n-C6F14), and n-hexadecafluoroheptane (n-C7F16). Additionally, we report the first data set on the atmospheric mixing ratios of perfluoro-2-methylpentane (i-C6F14). The existence and significance of PFC isomers have not been reported before, due to the analytical challenges of separating them. The time series spans a period from 1978 to the present. Several data sets are used to investigate temporal and spatial trends of these PFCs: time series of air samples collected at Cape Grim, Australia, from 1978 to the start of 2018; a time series of air samples collected between July 2015 and April 2017 at Tacolneston, UK; and intensive campaign-based sampling collections from Taiwan. Although the remote “background” Southern Hemispheric Cape Grim time series indicates that recent growth rates of most of these PFCs are lower than in the 1990s, we continue to see significantly increasing mixing ratios that are between 6 % and 27 % higher by the end of 2017 compared to abundances measured in 2010. Air samples from Tacolneston show a positive offset in PFC mixing ratios compared to the Southern Hemisphere baseline. The highest mixing ratios and variability are seen in air samples from Taiwan, which is therefore likely situated much closer to PFC sources, confirming predominantly Northern Hemispheric emissions for most PFCs. Even though these PFCs occur in the atmosphere at levels of parts per trillion molar or less, their total cumulative global emissions translate into 833 million metric tonnes of CO2 equivalent by the end of 2017, 23 % of which has been emitted since 2010. Almost two-thirds of the CO2 equivalent emissions within the last decade are attributable to c-C4F8, which currently also has the highest emission rates that continue to grow. Sources of all PFCs covered in this work remain poorly constrained and reported emissions in global databases do not account for the abundances found in the atmosphere

Scaffold-mediated Nucleation of Protein Signaling Complexes: Elementary Principles

Proteins with multiple binding sites play important roles in cell signaling systems by nucleating protein complexes in which, for example, enzymes and substrates are co-localized. Proteins that specialize in this function are called by a variety names, including adapter, linker and scaffold. Scaffold-mediated nucleation of protein complexes can be either constitutive or induced. Induced nucleation is commonly mediated by a docking site on a scaffold that is activated by phosphorylation. Here, by considering minimalist mathematical models, which recapitulate scaffold effects seen in more mechanistically detailed models, we obtain analytical and numerical results that provide insights into scaffold function. These results elucidate how recruitment of a pair of ligands to a scaffold depends on the concentrations of the ligands, on the binding constants for ligand-scaffold interactions, on binding cooperativity, and on the milieu of the scaffold, as ligand recruitment is affected by competitive ligands and decoy receptors. For the case of a bivalent scaffold, we obtain an expression for the unique scaffold concentration that maximally recruits a pair of monovalent ligands. Through simulations, we demonstrate that a bivalent scaffold can nucleate distinct sets of ligands to equivalent extents when the scaffold is present at different concentrations. Thus, the function of a scaffold can potentially change qualitatively with a change in copy number. We also demonstrate how a scaffold can change the catalytic efficiency of an enzyme and the sensitivity of the rate of reaction to substrate concentration. The results presented here should be useful for understanding scaffold function and for engineering scaffolds to have desired properties.Comment: 12 pages, 8 figure

Investigating stratospheric changes between 2009 and 2018 with halogenated trace gas data from aircraft, AirCores, and a global model focusing on CFC-11

We present new observations of trace gases in the stratosphere based on a cost-effective sampling technique that can access much higher altitudes than aircraft. The further development of this method now provides detection of species with abundances in the parts per trillion (ppt) range and below. We obtain mixing ratios for six gases (CFC-11, CFC-12, HCFC-22, H-1211, H-1301, and SF6), all of which are important for understanding stratospheric ozone depletion and circulation. After demonstrating the quality of the data through comparisons with ground-based records and aircraft-based observations, we combine them with the latter to demonstrate its potential. We first compare the data with results from a global model driven by three widely used meteorological reanalyses. Secondly, we focus on CFC-11 as recent evidence has indicated renewed atmospheric emissions of that species relevant on a global scale. Because the stratosphere represents the main sink region for CFC-11, potential changes in stratospheric circulation and troposphere–stratosphere exchange fluxes have been identified as the largest source of uncertainty for the accurate quantification of such emissions. Our observations span over a decade (up until 2018) and therefore cover the period of the slowdown of CFC-11 global mixing ratio decreases measured at the Earth's surface. The spatial and temporal coverage of the observations is insufficient for a global quantitative analysis, but we do find some trends that are in contrast with expectations, indicating that the stratosphere may have contributed to the slower concentration decline in recent years. Further investigating the reanalysis-driven model data, we find that the dynamical changes in the stratosphere required to explain the apparent change in tropospheric CFC-11 emissions after 2013 are possible but with a very high uncertainty range. This is partly caused by the high variability of mass flux from the stratosphere to the troposphere, especially at timescales of a few years, and partly by large differences between runs driven by different reanalysis products, none of which agree with our observations well enough for such a quantitative analysis

Aircraft‐Based Observations of Ozone‐Depleting Substances in the Upper Troposphere and Lower Stratosphere in and Above the Asian Summer Monsoon

Recent studies show that the Asian summer monsoon anticyclone (ASMA) transports emissions from the rapidly industrializing nations in Asia into the tropical upper troposphere. Here, we present a unique set of measurements on over 100 air samples collected on multiple flights of the M55 Geophysica high altitude research aircraft over the Mediterranean, Nepal, and Northern India during the summers of 2016 and 2017 as part of the European Union project StratoClim. These air samples were measured for 27 ozone‐depleting substances (ODSs), many of which were enhanced above expected levels, including the chlorinated very short‐lived substances, dichloromethane (CH2Cl2), 1,2‐dichloroethane (CH2ClCH2Cl), and chloroform (CHCl3). CH2Cl2 mixing ratios in the tropopause region were 65–136 parts per trillion (ppt) in comparison to previous estimates of mixing ratios in the tropical tropopause layer of 30–44 ppt in 2013–2014. Backward trajectories, calculated with the trajectory module of the chemistry‐transport model CLaMS and driven by the ERA5 reanalysis, indicate possible source regions of CH2Cl2 in South Asia. We derived total equivalent chlorine (ECl), and equivalent effective stratospheric chlorine (EESC) and found that these quantities were substantially higher than previous estimates in the literature. EESC at mean age‐of‐air of 3 years based on the 2016 measurements was 1,861–1,872 ppt in comparison to a previously estimated EESC of 1,646 ppt. Our findings show that the ASMA transports larger than expected mixing ratios of long‐lived and very short‐lived ODSs into the upper troposphere and lower stratosphere, likely leading to an impact on the stratospheric ozone layer

Protecting High Energy Barriers: A New Equation to Regulate Boost Energy in Accelerated Molecular Dynamics Simulations

Molecular dynamics (MD) is one of the most common tools in computational chemistry. Recently, our group has employed accelerated molecular dynamics (aMD) to improve the conformational sampling over conventional molecular dynamics techniques. In the original aMD implementation, sampling is greatly improved by raising energy wells below a predefined energy level. Recently, our group presented an alternative aMD implementation where simulations are accelerated by lowering energy barriers of the potential energy surface. When coupled with thermodynamic integration simulations, this implementation showed very promising results. However, when applied to large systems, such as proteins, the simulation tends to be biased to high energy regions of the potential landscape. The reason for this behavior lies in the boost equation used since the highest energy barriers are dramatically more affected than the lower ones. To address this issue, in this work, we present a new boost equation that prevents oversampling of unfavorable high energy conformational states. The new boost potential provides not only better recovery of statistics throughout the simulation but also enhanced sampling of statistically relevant regions in explicit solvent MD simulations