Optic nerve head segmentation

Reliable and efficient optic disk localization and segmentation are important tasks in automated retinal screening. General-purpose edge detection algorithms often fail to segment the optic disk due to fuzzy boundaries, inconsistent image contrast or missing edge features. This paper presents an algorithm for the localization and segmentation of the optic nerve head boundary in low-resolution images (about 20 /spl mu//pixel). Optic disk localization is achieved using specialized template matching, and segmentation by a deformable contour model. The latter uses a global elliptical model and a local deformable model with variable edge-strength dependent stiffness. The algorithm is evaluated against a randomly selected database of 100 images from a diabetic screening programme. Ten images were classified as unusable; the others were of variable quality. The localization algorithm succeeded on all bar one usable image; the contour estimation algorithm was qualitatively assessed by an ophthalmologist as having Excellent-Fair performance in 83% of cases, and performs well even on blurred image

Fast Retinal Vessel Detection and Measurement Using Wavelets and Edge Location Refinement

The relationship between changes in retinal vessel morphology and the onset and progression of diseases such as diabetes, hypertension and retinopathy of prematurity (ROP) has been the subject of several large scale clinical studies. However, the difficulty of quantifying changes in retinal vessels in a sufficiently fast, accurate and repeatable manner has restricted the application of the insights gleaned from these studies to clinical practice. This paper presents a novel algorithm for the efficient detection and measurement of retinal vessels, which is general enough that it can be applied to both low and high resolution fundus photographs and fluorescein angiograms upon the adjustment of only a few intuitive parameters. Firstly, we describe the simple vessel segmentation strategy, formulated in the language of wavelets, that is used for fast vessel detection. When validated using a publicly available database of retinal images, this segmentation achieves a true positive rate of 70.27%, false positive rate of 2.83%, and accuracy score of 0.9371. Vessel edges are then more precisely localised using image profiles computed perpendicularly across a spline fit of each detected vessel centreline, so that both local and global changes in vessel diameter can be readily quantified. Using a second image database, we show that the diameters output by our algorithm display good agreement with the manual measurements made by three independent observers. We conclude that the improved speed and generality offered by our algorithm are achieved without sacrificing accuracy. The algorithm is implemented in MATLAB along with a graphical user interface, and we have made the source code freely available

Retinal Vessels Segmentation Techniques and Algorithms: A Survey

Retinal vessels identification and localization aim to separate the different retinal vasculature structure tissues, either wide or narrow ones, from the fundus image background and other retinal anatomical structures such as optic disc, macula, and abnormal lesions. Retinal vessels identification studies are attracting more and more attention in recent years due to non-invasive fundus imaging and the crucial information contained in vasculature structure which is helpful for the detection and diagnosis of a variety of retinal pathologies included but not limited to: Diabetic Retinopathy (DR), glaucoma, hypertension, and Age-related Macular Degeneration (AMD). With the development of almost two decades, the innovative approaches applying computer-aided techniques for segmenting retinal vessels are becoming more and more crucial and coming closer to routine clinical applications. The purpose of this paper is to provide a comprehensive overview for retinal vessels segmentation techniques. Firstly, a brief introduction to retinal fundus photography and imaging modalities of retinal images is given. Then, the preprocessing operations and the state of the art methods of retinal vessels identification are introduced. Moreover, the evaluation and validation of the results of retinal vessels segmentation are discussed. Finally, an objective assessment is presented and future developments and trends are addressed for retinal vessels identification techniques.https://doi.org/10.3390/app802015

ARTERY VEIN CLASSIFICATION OF BLOOD VESSELS IN RETINAL IMAGE: AN AUTOMATED APPROACH

ABSTRACT Artery/Vein (A/V) of retinal vessel is helpful for the automating the detection of various diseases such as Diabetic Retinography, high blood pressure, pancreas, and other vascular conditions. An automated approach is presented in this paper for classification of blood vessels into Artery/Vein based on the features extracted from the centerline pixels. The proposed method consists of 4 important phases: 1) Segmentation 2) Centerline Extraction 3) Feature Extraction and 4) Classification. First input image is converted into green channel then retinal vessels are extracted using segmentation process after that centerline of the vessels is extracted using the thinning algorithm. Next step is to extract the features from the centerline pixels and finally vessels are classified using the extracted features. Input images are available on the databases like VICAVR [7], DRIVE[5] and

A Multi-Anatomical Retinal Structure Segmentation System For Automatic Eye Screening Using Morphological Adaptive Fuzzy Thresholding

Eye exam can be as efficacious as physical one in determining health concerns. Retina screening can be the very first clue to detecting a variety of hidden health issues including pre-diabetes and diabetes. Through the process of clinical diagnosis and prognosis; ophthalmologists rely heavily on the binary segmented version of retina fundus image; where the accuracy of segmented vessels, optic disc and abnormal lesions extremely affects the diagnosis accuracy which in turn affect the subsequent clinical treatment steps. This thesis proposes an automated retinal fundus image segmentation system composed of three segmentation subsystems follow same core segmentation algorithm. Despite of broad difference in features and characteristics; retinal vessels, optic disc and exudate lesions are extracted by each subsystem without the need for texture analysis or synthesis. For sake of compact diagnosis and complete clinical insight, our proposed system can detect these anatomical structures in one session with high accuracy even in pathological retina images. The proposed system uses a robust hybrid segmentation algorithm combines adaptive fuzzy thresholding and mathematical morphology. The proposed system is validated using four benchmark datasets: DRIVE and STARE (vessels), DRISHTI-GS (optic disc), and DIARETDB1 (exudates lesions). Competitive segmentation performance is achieved, outperforming a variety of up-to-date systems and demonstrating the capacity to deal with other heterogenous anatomical structures

Novel methods in retinal vessel calibre feature extraction for systemic disease assessment

Retina and its vascular network have unique branching characteristics morphology of which will change as a result of some systemic diseases, including hypertension, stroke and diabetes. Therefore, retinal image has been used as non-invasive screening window for risk assessment and prediction of such disease condition especially at the baseline. The assessment is based on a number of features among which vessel diameter (both individual and summary) and fractal dimension (FD) are the ones mostly associated with risk of diabetes and stroke. The association is linked to the higher risk of diabetes and stroke in people with narrower retinal arteriole diameter or change in overall fractal dimension independent of any risk factor (i.e. blood pressure, cardiovascular risk factors). Diameter measurement requires vessel edges to be located and tracked however; accurate edge perception is subject to image contrast, shadows, lighting condition and even presence of retinopathy legions close to vessel boundaries. This will lead to imprecision and inconsistencies between different automatic measurement techniques and may affect the significance of its association with disease condition in risk-assessment studies. As accuracy and success of diameter measurement is subject to large variations due to image artifacts it may not be suitable for fully automatic applications. In order to compensate for such error, at first two novel automatic vessel diameter measurement techniques were proposed and validated which were more robust in the presence of such image artifacts compared to similar methods. However, sometimes the exact edge location and actual diameter value is not of interest. In most case-control studies, it is of importance to comparatively evaluate the variations in retinal vessel diameter as a sign of retinopathy such as arteriolar nicking as an example of hypertensive retinopathy. Vessel diameter is often required to be compared with a reference value in many analytical assessments for diagnostic purpose. This includes monitoring the diameter variations of a specific vessel segment within single subject overtime or across multiple subjects. This helps ophthalmologists to understand whether it has undergone any significant change and perhaps associate it with a disease abnormality. A technique that can effectively quantify that change without being impaired by image artifacts is of more importance and one of the rationales of this study. This research hypothesized an edge independent solution for quantifying diameter variations when the actual diameter value is not required and proposed a new feature based on fractal analysis of vessel cross-section profile as a time series signal. This feature provides a link between FD as a global measure of the complexity and diameter variation as local property of a specific vessel segment. The clinical application of this feature has been validated on two population studies which showed promising result for assessment of mild non-proliferative diabetic retinopathy and 10-year stroke. This research work has also investigated whether the FD of retinal microvasculature would be affected by cyclic pulsations of retinal vessels and whether ECG synchronization is required prior to taking fundus images to compensate for this potential source of variations

Digital ocular fundus imaging: a review

Ocular fundus imaging plays a key role in monitoring the health status of the human eye. Currently, a large number of imaging modalities allow the assessment and/or quantification of ocular changes from a healthy status. This review focuses on the main digital fundus imaging modality, color fundus photography, with a brief overview of complementary techniques, such as fluorescein angiography. While focusing on two-dimensional color fundus photography, the authors address the evolution from nondigital to digital imaging and its impact on diagnosis. They also compare several studies performed along the transitional path of this technology. Retinal image processing and analysis, automated disease detection and identification of the stage of diabetic retinopathy (DR) are addressed as well. The authors emphasize the problems of image segmentation, focusing on the major landmark structures of the ocular fundus: the vascular network, optic disk and the fovea. Several proposed approaches for the automatic detection of signs of disease onset and progression, such as microaneurysms, are surveyed. A thorough comparison is conducted among different studies with regard to the number of eyes/subjects, imaging modality, fundus camera used, field of view and image resolution to identify the large variation in characteristics from one study to another. Similarly, the main features of the proposed classifications and algorithms for the automatic detection of DR are compared, thereby addressing computer-aided diagnosis and computer-aided detection for use in screening programs.Fundação para a Ciência e TecnologiaFEDErPrograma COMPET

Probabilistic labelling for enhancement of vessel networks applied to retinal images

Occlusive vascular disease affecting arterial circulations is the major and fastest growing health problem worldwide, and underlies common conditions such as heart attack, stroke and peripheral vascular disease. Although vascular diseases may be assessed according to clinical history, screening may be required to evaluate health conditions or courses of treatment. Vasculature in the retina and other organs such as the brain have similar anatomical properties and regulatory mechanisms. Changes in the morphology of retinal vasculature may be associated with vascular-related conditions such as hypertension and stroke. Owing to its high cost-effectiveness, eye fundus photography is often used to study changes in the retinal vasculature. This research proposes a probabilistic pixel labelling method based on analysis of local and global features of the image to enhance the detail of vessel structures. Our approach produces a probability map that could be further used by contextual approaches (e.g. Markov Random Fields) for segmenting vessel networks as future application. We first correct contrast variation due to non-uniform illumination and reflections produced by eye tissue using statistical methods to locally estimate the contrast behind vasculature structures. Our labelling method is based on the Hessian matrix to locally estimate the maximum probability of the principal local curvature—given by eigenvalues—matching an ideal vessel curvature. We defined a realistic model based on imaging physics to produce the ideal vessel curvature governed by the Beer-Lambert Law for estimating the absorption of energy as it is propagated through uniformly filled objects. The local maximum posterior probability—based on Bayes’ rule—was eventually estimated by combining the prior (using the proposed background estimation) and the likelihood produced by Monte Carlo simulations. The proposed method in this research was compared with one of the most popular vessel detectors due to Frangi showing similar results