Paralelização de laços doacross usando anotações de componentes e probabilidade de Loop-Carried

Orientadores: Guido Costa Souza de Araújo, Márcio Machado PereiraDissertação (mestrado) - Universidade Estadual de Campinas, Instituto de ComputaçãoResumo: A paralelização de laços é usada para se obter melhor desempenho em algoritmos intensivos, entretando, não são todos os laços que podem ser facilmente paralelizados. Os laços chamados de DOACROSS possuem dependências entre iterações, i.e. uma iteração calcula um dado que é usado por outra iteração futura. Este tipo de dependência é chamada de loop-carried e não pode ser paralelizada trivialmente porque a ordem de execução das iterações deve ser respeitada. Algumas técnicas podem ser usadas para paralelizar este tipo de laço, porém o programador deve entender como funciona o algoritmo e deve escolher quais instruções podem ser executadas em paralelo e quais instruções devem ser executadas sequencialmente. Estas componentes sequenciais e paralelas precisam ser separadas manualmente pelo programador e a comunicação entre as componentes deve ser incluída, a fim de respeitar as dependências entre componentes e as dependências entre iterações. Implementar essas técnicas é um trabalho laborioso que requer uma certa experiência do programador para separar as componentes e encontrar as dependências para implementar a comunicação entre as componentes/threads. Esta comunicação pode ser feita através de filas ou buffers, dependendo do algoritmo de paralelização escolhido. Uma das técnicas de paralelização é o algoritmo mais tradicional, chamado de DOACROSS que foi implementado no OpenMP 4.5 através da cláusula depend da diretiva ordered. Este pragma deve ser usado dentro da região de um laço paralelo do OpenMP a fim de separar as componentes que devem ser sequenciais. A comunicação e a sincronização são implementadas automaticamente utilizando a biblioteca de runtime do OpenMP. Este método remove do programador o trabalho de programação, entretando, ainda é necessário delimitar explicitamente as componentes sequenciais. Outro algoritmo de paralelização estudado foi o Batched DoAcross (BDX). Este algoritmo pode ser usado para reduzir o overhead da comunicação entre componentes, entretanto, a implementação deve ser feita manualmente pelo programador e requer que o programador separe as componentes sequenciais e paralelas, crie barreiras de sincronização para as componentes sequenciais, crie buffers para a comunicação entre componentes e crie variáveis compartilhadas para a comunicação entre as threads (dependências entre iterações). Nos experimentos, foi percebido que a escolha do algoritmo de paralelização depende de alguns fatores, i.e. a estrutura do algoritmo, a proporção das dependências entre iterações, o número de iterações do laço e o tamanho do laço. Foi criada então uma nova cláusula para o OpenMP que, quando usada juntamente com a diretiva ordered, consegue separar as componentes sequenciais e paralelas e implementar essas técnicas de forma automática. Esta cláusula, chamada de use, deve receber um parâmetro que especifica qual técnica o programador quer utilizar para paralelizar o laçoAbstract: Loop parallelization can be used to achieve better performance on intensive algorithms, however, not all loops can be easily parallelized. The called 'DOACROSS' loops have dependences between different iterations, i.e. some iteration computes a data which is used in a later iteration. This kind of dependence is called loop-carried dependence and cannot be simply parallelized because iterations execution order must be respected. Some techniques can be used to parallelize this kind of loop, however, the programmer must understand how the algorithm works and choose which instructions can be executed in parallel and which instructions need to be serialized. These serial and parallel components need to be manually separated by programmer and communication between components must be included to respect dependences inside loop body and between threads to respect loop-carried dependences. Implementing these techniques is a laborious work that requires a certain expertise from programmer to separate loop components and find dependences to implement communication between components/threads. This communication can be done by using a queue or a buffer, depending on the algorithm used to parallelize. One of these parallelization techniques is the traditional DOACROSS, which was implemented by using depend clause for the ordered directive in OpenMP 4.5. This OpenMP construct is used within OpenMP loop region to separate serial and parallel components, then, communication and synchronization are automatically implemented by OpenMP Runtime. This method removes most of the programming work from the programmer, however still requires to explicitly delimit serial region. Another studied parallelization technique is the Batched DoAcross (BDX). This algorithm can be used to reduce the communication overhead of synchronization between components, however, the implementation must be done manually by programmer, which requires for the programmer to separate serial and parallel components, create barriers to synchronization in serial components, create buffers for communication between components and create the shared variables for communication between threads (loop-carried dependences). In our experiments, we noticed that some factors must be taken for the choice of parallelization technique, i.e. algorithm structure, loop-carried ratio, number of loop iterations and loop size. We created a new OpenMP clause that, used together with the ordered directive, can separate these components and implement these techniques automatically. This clause, is called use, receive a parameter for specifying which parallelization technique the programmer want to be implementedMestradoCiência da ComputaçãoMestre em Ciência da Computaçã

An approach to task-based parallel programming for undergraduate students

This paper presents the description of a compulsory parallel programming course in the bachelor degree in Informatics Engineering at the Barcelona School of Informatics, Universitat Politècnica de Catalunya UPC-BarcelonaTech. The main focus of the course is on the shared-memory programming paradigm, which facilitates the presentation of fundamental aspects and notions of parallel computing. Unlike the “traditional” loop-based approach, which is the focus of parallel programming courses in other universities, this course presents the parallel programming concepts using a task-based approach. Tasking allows students to explore a broader set of parallel decomposition strategies, including linear, iterative and recursive strategies, and their implementation using the current version of OpenMP (OpenMP 4.5), which offers mechanisms (pragmas and intrinsic functions) to easily map these strategies into parallel programs. Simple models to understand the benefits of a task decomposition and the trade-offs introduced by different kinds of overheads are included in the course, together with the use of tools that allow an easy exploration of different task decomposition strategies and their potential parallelism (Tareador) and instrumentation and analysis of task parallel executions on real machines (Extrae and Paraver).This work has been supported by the grant SEV-2015-0493 of the Severo Ochoa Program, awarded by the Spanish Gov- ernment, by the Spanish Ministry of Science and Innovation (contract TIN2015-65316-P) and by Generalitat de Catalunya (contracts 2014-MOOC-00057 and 2014-SGR-1051). We also thank the anonymous reviewers and editor for their comments during the review process, other professors that have been in- volved in the implementation of the course and Paul Carpenter at BSC for his corrections and suggestions to improve the text.Postprint (published version

Dynamic and Dual Streaming Methods for H.264 Video and Parallel Performance Modeling

Traditional approaches to streaming H.264 video over a network typically rely on a single method of transport (i.e., reliable or unreliable) and/or use static values for parameters that can have a significant negative impact on the perceptual quality of the received video. This dissertation presents a dynamic method for wireless channel selection during video streaming, and explores the latency and QoE improvements yielded by the FDSP dual streaming method. The increased workload that results from these dynamic methods can lead to a counterproductive impairment of streaming performance, and therefore requires efficient use of the multiple cores typically present in both sender and receiver (or server and client). This dissertation therefore presents a performance cost model which can be used to guide the parallelization of specific types of client or server-side streaming components -- specifically, programs containing non-DOALL loops that have inter-iteration data dependences which constrain their parallelism

Discovery of Potential Parallelism in Sequential Programs

In the era of multicore processors, the responsibility for performance gains has been shifted onto software developers. Once improvements of the sequential algorithm have been exhausted, software-managed parallelism is the only option left. However, writing parallel code is still difficult, especially when parallelizing sequential code written by someone else. A key task in this process is the identification of suitable parallelization targets in the source code. Parallelism discovery tools help developers to find such targets automatically. Unfortunately, tools that identify parallelism during compilation are usually conservative due to the lack of runtime information, and tools relying on runtime information primarily suffer from high overhead in terms of both time and memory. This dissertation presents a generic framework for parallelism discovery based on dynamic program analysis, supporting various types of parallelism while incurring practically affordable overhead. The framework contains two main components: an efficient data-dependence profiler and a set of parallelism discovery algorithms based on a language-independent concept called Computational Unit. The data-dependence profiler serves as the foundation of the parallelism discovery framework. Traditional dependence profiling approaches introduce a tremendous amount of time and memory overhead. To lower the overhead, current methods limit their scope to the subset of the dependence information needed for the analysis they have been created for, sacrificing generality and discouraging reuse. In contrast, the profiler shown in this thesis addresses the problem via signature-based memory management and a lock-free parallel design. It produces detailed dependences not only for sequential but also for multi-threaded code without causing prohibitive overhead, allowing it to serve as a generic base for various program analysis techniques. Computational Units (CUs) provide a language-independent foundation for parallelism discovery. CUs are computations that follow the read-compute-write pattern. Unlike other concepts, they are not restricted to predefined language constructs. A program is represented as a CU graph, in which vertexes are CUs and edges are data dependences. This allows parallelism to be detected that spreads across multiple language constructs, taking code refactoring into consideration. The parallelism discovery algorithms cover both loop and task parallelism. Results of our experiments show that 1) the efficient data-dependence profiler has a very competitive average slowdown of around 80× with accuracy higher than 99.6%; 2) the framework discovers parallelism with high accuracy, identifying 92.5% of the parallel loops in NAS benchmarks; 3) when parallelizing well-known open-source software following the outputs of the framework, reasonable speedups are obtained. Finally, use cases beyond parallelism discovery are briefly demonstrated to show the generality of the framework

Runtime-adaptive generalized task parallelism

Multi core systems are ubiquitous nowadays and their number is ever increasing. And while, limited by physical constraints, the computational power of the individual cores has been stagnating or even declining for years, a solution to effectively utilize the computational power that comes with the additional cores is yet to be found. Existing approaches to automatic parallelization are often highly specialized to exploit the parallelism of specific program patterns, and thus to parallelize a small subset of programs only. In addition, frequently used invasive runtime systems prohibit the combination of different approaches, which impedes the practicality of automatic parallelization. In the following thesis, we show that specializing to narrowly defined program patterns is not necessary to efficiently parallelize applications coming from different domains. We develop a generalizing approach to parallelization, which, driven by an underlying mathematical optimization problem, is able to make qualified parallelization decisions taking into account the involved runtime overhead. In combination with a specializing, adaptive runtime system the approach is able to match and even exceed the performance results achieved by specialized approaches.Mehrkernsysteme sind heutzutage allgegenwärtig und finden täglich weitere Verbreitung. Und während, limitiert durch die Grenzen des physikalisch Machbaren, die Rechenkraft der einzelnen Kerne bereits seit Jahren stagniert oder gar sinkt, existiert bis heute keine zufriedenstellende Lösung zur effektiven Ausnutzung der gebotenen Rechenkraft, die mit der steigenden Anzahl an Kernen einhergeht. Existierende Ansätze der automatischen Parallelisierung sind häufig hoch spezialisiert auf die Ausnutzung bestimmter Programm-Muster, und somit auf die Parallelisierung weniger Programmteile. Hinzu kommt, dass häufig verwendete invasive Laufzeitsysteme die Kombination mehrerer Parallelisierungs-Ansätze verhindern, was der Praxistauglichkeit und Reichweite automatischer Ansätze im Wege steht. In der Ihnen vorliegenden Arbeit zeigen wir, dass die Spezialisierung auf eng definierte Programmuster nicht notwendig ist, um Parallelität in Programmen verschiedener Domänen effizient auszunutzen. Wir entwickeln einen generalisierenden Ansatz der Parallelisierung, der, getrieben von einem mathematischen Optimierungsproblem, in der Lage ist, fundierte Parallelisierungsentscheidungen unter Berücksichtigung relevanter Kosten zu treffen. In Kombination mit einem spezialisierenden und adaptiven Laufzeitsystem ist der entwickelte Ansatz in der Lage, mit den Ergebnissen spezialisierter Ansätze mitzuhalten, oder diese gar zu übertreffen.Part of the work presented in this thesis was performed in the context of the SoftwareCluster project EMERGENT (http://www.software-cluster.org). It was funded by the German Federal Ministry of Education and Research (BMBF) under grant no. “01IC10S01”. Later work has been supported, also by the German Federal Ministry of Education and Research (BMBF), through funding for the Center for IT-Security, Privacy and Accountability (CISPA) under grant no. “16KIS0344”

Structured parallelism discovery with hybrid static-dynamic analysis and evaluation technique

Parallel computer architectures have dominated the computing landscape for the past two decades; a trend that is only expected to continue and intensify, with increasing specialization and heterogeneity. This creates huge pressure across the software stack to produce programming languages, libraries, frameworks and tools which will efficiently exploit the capabilities of parallel computers, not only for new software, but also revitalizing existing sequential code. Automatic parallelization, despite decades of research, has had limited success in transforming sequential software to take advantage of efficient parallel execution. This thesis investigates three approaches that use commutativity analysis as the enabler for parallelization. This has the potential to overcome limitations of traditional techniques. We introduce the concept of liveness-based commutativity for sequential loops. We examine the use of a practical analysis utilizing liveness-based commutativity in a symbolic execution framework. Symbolic execution represents input values as groups of constraints, consequently deriving the output as a function of the input and enabling the identification of further program properties. We employ this feature to develop an analysis and discern commutativity properties between loop iterations. We study the application of this approach on loops taken from real-world programs in the OLDEN and NAS Parallel Benchmark (NPB) suites, and identify its limitations and related overheads. Informed by these findings, we develop Dynamic Commutativity Analysis (DCA), a new technique that leverages profiling information from program execution with specific input sets. Using profiling information, we track liveness information and detect loop commutativity by examining the code’s live-out values. We evaluate DCA against almost 1400 loops of the NPB suite, discovering 86% of them as parallelizable. Comparing our results against dependence-based methods, we match the detection efficacy of two dynamic and outperform three static approaches, respectively. Additionally, DCA is able to automatically detect parallelism in loops which iterate over Pointer-Linked Data Structures (PLDSs), taken from wide range of benchmarks used in the literature, where all other techniques we considered failed. Parallelizing the discovered loops, our methodology achieves an average speedup of 3.6× across NPB (and up to 55×) and up to 36.9× for the PLDS-based loops on a 72-core host. We also demonstrate that our methodology, despite relying on specific input values for profiling each program, is able to correctly identify parallelism that is valid for all potential input sets. Lastly, we develop a methodology to utilize liveness-based commutativity, as implemented in DCA, to detect latent loop parallelism in the shape of patterns. Our approach applies a series of transformations which subsequently enable multiple applications of DCA over the generated multi-loop code section and match its loop commutativity outcomes against the expected criteria for each pattern. Applying our methodology on sets of sequential loops, we are able to identify well-known parallel patterns (i.e., maps, reduction and scans). This extends the scope of parallelism detection to loops, such as those performing scan operations, which cannot be determined as parallelizable by simply evaluating liveness-based commutativity conditions on their original form

Compilation techniques and language support to facilitate dependence-driven computation

As the demand increases for high performance and power efficiency in modern computer runtime systems and architectures, programmers are left with the daunting challenge of fully exploiting these systems for efficiency, high-level expressibility, and portability across different computing architectures. Emerging programming models such as the task-based runtime StarPU and many-core architectures such as GPUs force programmers into choosing either low-level programming languages or putting complete faith in the compiler. As has been previously studied in extensive detail, both development approaches have their own respective trade-offs. The goal of this thesis is to help make parallel programming easier. It addresses these challenges by providing new compilation techniques for high-level programming languages that conform to commonly-accepted paradigms in order to leverage these emerging runtime systems and architectures. In particular, this dissertation makes several contributions to these challenges by leveraging the high-level programming language Chapel in order to efficiently map computation and data onto both the task-based runtime system StarPU and onto GPU-based accelerators. Different loop-based parallel programs and experiments are evaluated in order to measure the effectiveness of the proposed compiler algorithms and their optimizations, while also providing programmability metrics when leveraging high-level languages. In order to exploit additional performance when mapping onto shared memory systems, this thesis proposes a set of compiler and runtime-based heuristics that determine the profitable processor tile shapes and sizes when mapping multiply-nested parallel loops. Finally, a new benchmark-suite named P-Ray is presented. This is used to provide machine characteristics in a portable manner that can be used by either a compiler, an auto-tuning framework, or the programmer when optimizing their applications

Guided Automatic Binary Parallelisation

For decades, the software industry has amassed a vast repository of pre-compiled libraries and executables which are still valuable and actively in use. However, for a significant fraction of these binaries, most of the source code is absent or is written in old languages, making it practically impossible to recompile them for new generations of hardware. As the number of cores in chip multi-processors (CMPs) continue to scale, the performance of this legacy software becomes increasingly sub-optimal. Rewriting new optimised and parallel software would be a time-consuming and expensive task. Without source code, existing automatic performance enhancing and parallelisation techniques are not applicable for legacy software or parts of new applications linked with legacy libraries. In this dissertation, three tools are presented to address the challenge of optimising legacy binaries. The first, GBR (Guided Binary Recompilation), is a tool that recompiles stripped application binaries without the need for the source code or relocation information. GBR performs static binary analysis to determine how recompilation should be undertaken, and produces a domain-specific hint program. This hint program is loaded and interpreted by the GBR dynamic runtime, which is built on top of the open-source dynamic binary translator, DynamoRIO. In this manner, complicated recompilation of the target binary is carried out to achieve optimised execution on a real system. The problem of limited dataflow and type information is addressed through cooperation between the hint program and JIT optimisation. The utility of GBR is demonstrated by software prefetch and vectorisation optimisations to achieve performance improvements compared to their original native execution. The second tool is called BEEP (Binary Emulator for Estimating Parallelism), an extension to GBR for binary instrumentation. BEEP is used to identify potential thread-level parallelism through static binary analysis and binary instrumentation. BEEP performs preliminary static analysis on binaries and encodes all statically-undecided questions into a hint program. The hint program is interpreted by GBR so that on-demand binary instrumentation codes are inserted to answer the questions from runtime information. BEEP incorporates a few parallel cost models to evaluate identified parallelism under different parallelisation paradigms. The third tool is named GABP (Guided Automatic Binary Parallelisation), an extension to GBR for parallelisation. GABP focuses on loops from sequential application binaries and automatically extracts thread-level parallelism from them on-the-fly, under the direction of the hint program, for efficient parallel execution. It employs a range of runtime schemes, such as thread-level speculation and synchronisation, to handle runtime data dependences. GABP achieves a geometric mean of speedup of 1.91x on binaries from SPEC CPU2006 on a real x86-64 eight-core system compared to native sequential execution. Performance is obtained for SPEC CPU2006 executables compiled from a variety of source languages and by different compilers.St John's Benefactor Scholarship ARM Sponsorshi

Profile-driven parallelisation of sequential programs

Traditional parallelism detection in compilers is performed by means of static analysis and more specifically data and control dependence analysis. The information that is available at compile time, however, is inherently limited and therefore restricts the parallelisation opportunities. Furthermore, applications written in C – which represent the majority of today’s scientific, embedded and system software – utilise many lowlevel features and an intricate programming style that forces the compiler to even more conservative assumptions. Despite the numerous proposals to handle this uncertainty at compile time using speculative optimisation and parallelisation, the software industry still lacks any pragmatic approaches that extracts coarse-grain parallelism to exploit the multiple processing units of modern commodity hardware. This thesis introduces a novel approach for extracting and exploiting multiple forms of coarse-grain parallelism from sequential applications written in C. We utilise profiling information to overcome the limitations of static data and control-flow analysis enabling more aggressive parallelisation. Profiling is performed using an instrumentation scheme operating at the Intermediate Representation (Ir) level of the compiler. In contrast to existing approaches that depend on low-level binary tools and debugging information, Ir-profiling provides precise and direct correlation of profiling information back to the Ir structures of the compiler. Additionally, our approach is orthogonal to existing automatic parallelisation approaches and additional fine-grain parallelism may be exploited. We demonstrate the applicability and versatility of the proposed methodology using two studies that target different forms of parallelism. First, we focus on the exploitation of loop-level parallelism that is abundant in many scientific and embedded applications. We evaluate our parallelisation strategy against the Nas and Spec Fp benchmarks and two different multi-core platforms (a shared-memory Intel Xeon Smp and a heterogeneous distributed-memory Ibm Cell blade). Empirical evaluation shows that our approach not only yields significant improvements when compared with state-of- the-art parallelising compilers, but comes close to and sometimes exceeds the performance of manually parallelised codes. On average, our methodology achieves 96% of the performance of the hand-tuned parallel benchmarks on the Intel Xeon platform, and a significant speedup for the Cell platform. The second study, addresses the problem of partially sequential loops, typically found in implementations of multimedia codecs. We develop a more powerful whole-program representation based on the Program Dependence Graph (Pdg) that supports profiling, partitioning and codegeneration for pipeline parallelism. In addition we demonstrate how this enhances conventional pipeline parallelisation by incorporating support for multi-level loops and pipeline stage replication in a uniform and automatic way. Experimental results using a set of complex multimedia and stream processing benchmarks confirm the effectiveness of the proposed methodology that yields speedups up to 4.7 on a eight-core Intel Xeon machine

MetaFork: A Compilation Framework for Concurrency Models Targeting Hardware Accelerators

Parallel programming is gaining ground in various domains due to the tremendous computational power that it brings; however, it also requires a substantial code crafting effort to achieve performance improvement. Unfortunately, in most cases, performance tuning has to be accomplished manually by programmers. We argue that automated tuning is necessary due to the combination of the following factors. First, code optimization is machine-dependent. That is, optimization preferred on one machine may be not suitable for another machine. Second, as the possible optimization search space increases, manually finding an optimized configuration is hard. Therefore, developing new compiler techniques for optimizing applications is of considerable interest. This thesis aims at generating new techniques that will help programmers develop efficient algorithms and code targeting hardware acceleration technologies, in a more effective manner. Our work is organized around a compilation framework, called MetaFork, for concurrency platforms and its application to automatic parallelization. MetaFork is a high-level programming language extending C/C++, which combines several models of concurrency including fork-join, SIMD and pipelining parallelism. MetaFork is also a compilation framework which aims at facilitating the design and implementation of concurrent programs through four key features which make MetaFork unique and novel: (1) Perform automatic code translation between concurrency platforms targeting multi-core architectures. (2) Provide a high-level language for expressing concurrency as in the fork-join model, the SIMD paradigm and the pipelining parallelism. (3) Generate parallel code from serial code with an emphasis on code depending on machine or program parameters (e.g. cache size, number of processors, number of threads per thread block). (4) Optimize code depending on parameters that are unknown at compile-time