Entity-Oriented Search

This open access book covers all facets of entity-oriented search—where “search” can be interpreted in the broadest sense of information access—from a unified point of view, and provides a coherent and comprehensive overview of the state of the art. It represents the first synthesis of research in this broad and rapidly developing area. Selected topics are discussed in-depth, the goal being to establish fundamental techniques and methods as a basis for future research and development. Additional topics are treated at a survey level only, containing numerous pointers to the relevant literature. A roadmap for future research, based on open issues and challenges identified along the way, rounds out the book. The book is divided into three main parts, sandwiched between introductory and concluding chapters. The first two chapters introduce readers to the basic concepts, provide an overview of entity-oriented search tasks, and present the various types and sources of data that will be used throughout the book. Part I deals with the core task of entity ranking: given a textual query, possibly enriched with additional elements or structural hints, return a ranked list of entities. This core task is examined in a number of different variants, using both structured and unstructured data collections, and numerous query formulations. In turn, Part II is devoted to the role of entities in bridging unstructured and structured data. Part III explores how entities can enable search engines to understand the concepts, meaning, and intent behind the query that the user enters into the search box, and how they can provide rich and focused responses (as opposed to merely a list of documents)—a process known as semantic search. The final chapter concludes the book by discussing the limitations of current approaches, and suggesting directions for future research. Researchers and graduate students are the primary target audience of this book. A general background in information retrieval is sufficient to follow the material, including an understanding of basic probability and statistics concepts as well as a basic knowledge of machine learning concepts and supervised learning algorithms

Automatically Acquiring A Semantic Network Of Related Concepts

We describe the automatic acquisition of a semantic network in which over 7,500 of the most frequently occurring nouns in the English language are linked to their semantically related concepts in the WordNet noun ontology. Relatedness between nouns is discovered automatically from lexical co-occurrence in Wikipedia texts using a novel adaptation of an information theoretic inspired measure. Our algorithm then capitalizes on salient sense clustering among these semantic associates to automatically disambiguate them to their corresponding WordNet noun senses (i.e., concepts). The resultant concept-to-concept associations, stemming from 7,593 target nouns, with 17,104 distinct senses among them, constitute a large-scale semantic network with 208,832 undirected edges between related concepts. Our work can thus be conceived of as augmenting the WordNet noun ontology with RelatedTo links. The network, which we refer to as the Szumlanski-Gomez Network (SGN), has been subjected to a variety of evaluative measures, including manual inspection by human judges and quantitative comparison to gold standard data for semantic relatedness measurements. We have also evaluated the network’s performance in an applied setting on a word sense disambiguation (WSD) task in which the network served as a knowledge source for established graph-based spreading activation algorithms, and have shown: a) the network is competitive with WordNet when used as a stand-alone knowledge source for WSD, b) combining our network with WordNet achieves disambiguation results that exceed the performance of either resource individually, and c) our network outperforms a similar resource, WordNet++ (Ponzetto & Navigli, 2010), that has been automatically derived from annotations in the Wikipedia corpus. iii Finally, we present a study on human perceptions of relatedness. In our study, we elicited quantitative evaluations of semantic relatedness from human subjects using a variation of the classical methodology that Rubenstein and Goodenough (1965) employed to investigate human perceptions of semantic similarity. Judgments from individual subjects in our study exhibit high average correlation to the elicited relatedness means using leave-one-out sampling (r = 0.77, σ = 0.09, N = 73), although not as high as average human correlation in previous studies of similarity judgments, for which Resnik (1995) established an upper bound of r = 0.90 (σ = 0.07, N = 10). These results suggest that human perceptions of relatedness are less strictly constrained than evaluations of similarity, and establish a clearer expectation for what constitutes human-like performance by a computational measure of semantic relatedness. We also contrast the performance of a variety of similarity and relatedness measures on our dataset to their performance on similarity norms and introduce our own dataset as a supplementary evaluative standard for relatedness measures

Semantic Enrichment of Ontology Mappings

Schema and ontology matching play an important part in the field of data integration and semantic web. Given two heterogeneous data sources, meta data matching usually constitutes the first step in the data integration workflow, which refers to the analysis and comparison of two input resources like schemas or ontologies. The result is a list of correspondences between the two schemas or ontologies, which is often called mapping or alignment. Many tools and research approaches have been proposed to automatically determine those correspondences. However, most match tools do not provide any information about the relation type that holds between matching concepts, for the simple but important reason that most common match strategies are too simple and heuristic to allow any sophisticated relation type determination. Knowing the specific type holding between two concepts, e.g., whether they are in an equality, subsumption (is-a) or part-of relation, is very important for advanced data integration tasks, such as ontology merging or ontology evolution. It is also very important for mappings in the biological or biomedical domain, where is-a and part-of relations may exceed the number of equality correspondences by far. Such more expressive mappings allow much better integration results and have scarcely been in the focus of research so far. In this doctoral thesis, the determination of the correspondence types in a given mapping is the focus of interest, which is referred to as semantic mapping enrichment. We introduce and present the mapping enrichment tool STROMA, which obtains a pre-calculated schema or ontology mapping and for each correspondence determines a semantic relation type. In contrast to previous approaches, we will strongly focus on linguistic laws and linguistic insights. By and large, linguistics is the key for precise matching and for the determination of relation types. We will introduce various strategies that make use of these linguistic laws and are able to calculate the semantic type between two matching concepts. The observations and insights gained from this research go far beyond the field of mapping enrichment and can be also applied to schema and ontology matching in general. Since generic strategies have certain limits and may not be able to determine the relation type between more complex concepts, like a laptop and a personal computer, background knowledge plays an important role in this research as well. For example, a thesaurus can help to recognize that these two concepts are in an is-a relation. We will show how background knowledge can be effectively used in this instance, how it is possible to draw conclusions even if a concept is not contained in it, how the relation types in complex paths can be resolved and how time complexity can be reduced by a so-called bidirectional search. The developed techniques go far beyond the background knowledge exploitation of previous approaches, and are now part of the semantic repository SemRep, a flexible and extendable system that combines different lexicographic resources. Further on, we will show how additional lexicographic resources can be developed automatically by parsing Wikipedia articles. The proposed Wikipedia relation extraction approach yields some millions of additional relations, which constitute significant additional knowledge for mapping enrichment. The extracted relations were also added to SemRep, which thus became a comprehensive background knowledge resource. To augment the quality of the repository, different techniques were used to discover and delete irrelevant semantic relations. We could show in several experiments that STROMA obtains very good results w.r.t. relation type detection. In a comparative evaluation, it was able to achieve considerably better results than related applications. This corroborates the overall usefulness and strengths of the implemented strategies, which were developed with particular emphasis on the principles and laws of linguistics

Semantic Analysis of Wikipedia's Linked Data Graph for Entity Detection and Topic Identification Applications

Semantic Web and Linked Data community is now the reality of the future of the Web. The standards and technologies defined in this field have opened a strong pathway towards a new era of knowledge management and representation for the computing world. The data structures and the semantic formats introduced by the Semantic Web standards offer a platform for all the data and knowledge providers in the world to present their information in a free, publicly available, semantically tagged, inter-linked, and machine-readable structure. As a result, the adaptation of the Semantic Web standards by data providers creates numerous opportunities for development of new applications which were not possible or, at best, hardly achievable using the current state of Web which is mostly consisted of unstructured or semi-structured data with minimal semantic metadata attached tailored mainly for human-readability. This dissertation tries to introduce a framework for effective analysis of the Semantic Web data towards the development of solutions for a series of related applications. In order to achieve such framework, Wikipedia is chosen as the main knowledge resource largely due to the fact that it is the main and central dataset in Linked Data community. In this work, Wikipedia and its Semantic Web version DBpedia are used to create a semantic graph which constitutes the knowledgebase and the back-end foundation of the framework. The semantic graph introduced in this research consists of two main concepts: entities and topics. The entities act as the knowledge items while topics create the class hierarchy of the knowledge items. Therefore, by assigning entities to various topics, the semantic graph presents all the knowledge items in a categorized hierarchy ready for further processing. Furthermore, this dissertation introduces various analysis algorithms over entity and topic graphs which can be used in a variety of applications, especially in natural language understanding and knowledge management fields. After explaining the details of the analysis algorithms, a number of possible applications are presented and potential solutions to these applications are provided. The main themes of these applications are entity detection, topic identification, and context acquisition. To demonstrate the efficiency of the framework algorithms, some of the applications are developed and comprehensively studied by providing detailed experimental results which are compared with appropriate benchmarks. These results show how the framework can be used in different configurations and how different parameters affect the performance of the algorithms

Automating Geospatial RDF Dataset Integration and Enrichment

Over the last years, the Linked Open Data (LOD) has evolved from a mere 12 to more than 10,000 knowledge bases. These knowledge bases come from diverse domains including (but not limited to) publications, life sciences, social networking, government, media, linguistics. Moreover, the LOD cloud also contains a large number of crossdomain knowledge bases such as DBpedia and Yago2. These knowledge bases are commonly managed in a decentralized fashion and contain partly verlapping information. This architectural choice has led to knowledge pertaining to the same domain being published by independent entities in the LOD cloud. For example, information on drugs can be found in Diseasome as well as DBpedia and Drugbank. Furthermore, certain knowledge bases such as DBLP have been published by several bodies, which in turn has lead to duplicated content in the LOD . In addition, large amounts of geo-spatial information have been made available with the growth of heterogeneous Web of Data. The concurrent publication of knowledge bases containing related information promises to become a phenomenon of increasing importance with the growth of the number of independent data providers. Enabling the joint use of the knowledge bases published by these providers for tasks such as federated queries, cross-ontology question answering and data integration is most commonly tackled by creating links between the resources described within these knowledge bases. Within this thesis, we spur the transition from isolated knowledge bases to enriched Linked Data sets where information can be easily integrated and processed. To achieve this goal, we provide concepts, approaches and use cases that facilitate the integration and enrichment of information with other data types that are already present on the Linked Data Web with a focus on geo-spatial data. The first challenge that motivates our work is the lack of measures that use the geographic data for linking geo-spatial knowledge bases. This is partly due to the geo-spatial resources being described by the means of vector geometry. In particular, discrepancies in granularity and error measurements across knowledge bases render the selection of appropriate distance measures for geo-spatial resources difficult. We address this challenge by evaluating existing literature for point set measures that can be used to measure the similarity of vector geometries. Then, we present and evaluate the ten measures that we derived from the literature on samples of three real knowledge bases. The second challenge we address in this thesis is the lack of automatic Link Discovery (LD) approaches capable of dealing with geospatial knowledge bases with missing and erroneous data. To this end, we present Colibri, an unsupervised approach that allows discovering links between knowledge bases while improving the quality of the instance data in these knowledge bases. A Colibri iteration begins by generating links between knowledge bases. Then, the approach makes use of these links to detect resources with probably erroneous or missing information. This erroneous or missing information detected by the approach is finally corrected or added. The third challenge we address is the lack of scalable LD approaches for tackling big geo-spatial knowledge bases. Thus, we present Deterministic Particle-Swarm Optimization (DPSO), a novel load balancing technique for LD on parallel hardware based on particle-swarm optimization. We combine this approach with the Orchid algorithm for geo-spatial linking and evaluate it on real and artificial data sets. The lack of approaches for automatic updating of links of an evolving knowledge base is our fourth challenge. This challenge is addressed in this thesis by the Wombat algorithm. Wombat is a novel approach for the discovery of links between knowledge bases that relies exclusively on positive examples. Wombat is based on generalisation via an upward refinement operator to traverse the space of Link Specifications (LS). We study the theoretical characteristics of Wombat and evaluate it on different benchmark data sets. The last challenge addressed herein is the lack of automatic approaches for geo-spatial knowledge base enrichment. Thus, we propose Deer, a supervised learning approach based on a refinement operator for enriching Resource Description Framework (RDF) data sets. We show how we can use exemplary descriptions of enriched resources to generate accurate enrichment pipelines. We evaluate our approach against manually defined enrichment pipelines and show that our approach can learn accurate pipelines even when provided with a small number of training examples. Each of the proposed approaches is implemented and evaluated against state-of-the-art approaches on real and/or artificial data sets. Moreover, all approaches are peer-reviewed and published in a conference or a journal paper. Throughout this thesis, we detail the ideas, implementation and the evaluation of each of the approaches. Moreover, we discuss each approach and present lessons learned. Finally, we conclude this thesis by presenting a set of possible future extensions and use cases for each of the proposed approaches

Large Language Models and Knowledge Graphs: Opportunities and Challenges

Large Language Models (LLMs) have taken Knowledge Representation - and the world - by storm. This inflection point marks a shift from explicit knowledge representation to a renewed focus on the hybrid representation of both explicit knowledge and parametric knowledge. In this position paper, we will discuss some of the common debate points within the community on LLMs (parametric knowledge) and Knowledge Graphs (explicit knowledge) and speculate on opportunities and visions that the renewed focus brings, as well as related research topics and challenges

Knowledge-driven entity recognition and disambiguation in biomedical text

Entity recognition and disambiguation (ERD) for the biomedical domain are notoriously difficult problems due to the variety of entities and their often long names in many variations. Existing works focus heavily on the molecular level in two ways. First, they target scientific literature as the input text genre. Second, they target single, highly specialized entity types such as chemicals, genes, and proteins. However, a wealth of biomedical information is also buried in the vast universe of Web content. In order to fully utilize all the information available, there is a need to tap into Web content as an additional input. Moreover, there is a need to cater for other entity types such as symptoms and risk factors since Web content focuses on consumer health. The goal of this thesis is to investigate ERD methods that are applicable to all entity types in scientific literature as well as Web content. In addition, we focus on under-explored aspects of the biomedical ERD problems -- scalability, long noun phrases, and out-of-knowledge base (OOKB) entities. This thesis makes four main contributions, all of which leverage knowledge in UMLS (Unified Medical Language System), the largest and most authoritative knowledge base (KB) of the biomedical domain. The first contribution is a fast dictionary lookup method for entity recognition that maximizes throughput while balancing the loss of precision and recall. The second contribution is a semantic type classification method targeting common words in long noun phrases. We develop a custom set of semantic types to capture word usages; besides biomedical usage, these types also cope with non-biomedical usage and the case of generic, non-informative usage. The third contribution is a fast heuristics method for entity disambiguation in MEDLINE abstracts, again maximizing throughput but this time maintaining accuracy. The fourth contribution is a corpus-driven entity disambiguation method that addresses OOKB entities. The method first captures the entities expressed in a corpus as latent representations that comprise in-KB and OOKB entities alike before performing entity disambiguation.Die Erkennung und Disambiguierung von Entitäten für den biomedizinischen Bereich stellen, wegen der vielfältigen Arten von biomedizinischen Entitäten sowie deren oft langen und variantenreichen Namen, große Herausforderungen dar. Vorhergehende Arbeiten konzentrieren sich in zweierlei Hinsicht fast ausschließlich auf molekulare Entitäten. Erstens fokussieren sie sich auf wissenschaftliche Publikationen als Genre der Eingabetexte. Zweitens fokussieren sie sich auf einzelne, sehr spezialisierte Entitätstypen wie Chemikalien, Gene und Proteine. Allerdings bietet das Internet neben diesen Quellen eine Vielzahl an Inhalten biomedizinischen Wissens, das vernachlässigt wird. Um alle verfügbaren Informationen auszunutzen besteht der Bedarf weitere Internet-Inhalte als zusätzliche Quellen zu erschließen. Außerdem ist es auch erforderlich andere Entitätstypen wie Symptome und Risikofaktoren in Betracht zu ziehen, da diese für zahlreiche Inhalte im Internet, wie zum Beispiel Verbraucherinformationen im Gesundheitssektor, relevant sind. Das Ziel dieser Dissertation ist es, Methoden zur Erkennung und Disambiguierung von Entitäten zu erforschen, die alle Entitätstypen in Betracht ziehen und sowohl auf wissenschaftliche Publikationen als auch auf andere Internet-Inhalte anwendbar sind. Darüber hinaus setzen wir Schwerpunkte auf oft vernachlässigte Aspekte der biomedizinischen Erkennung und Disambiguierung von Entitäten, nämlich Skalierbarkeit, lange Nominalphrasen und fehlende Entitäten in einer Wissensbank. In dieser Hinsicht leistet diese Dissertation vier Hauptbeiträge, denen allen das Wissen von UMLS (Unified Medical Language System), der größten und wichtigsten Wissensbank im biomedizinischen Bereich, zu Grunde liegt. Der erste Beitrag ist eine schnelle Methode zur Erkennung von Entitäten mittels Lexikonabgleich, welche den Durchsatz maximiert und gleichzeitig den Verlust in Genauigkeit und Trefferquote (precision and recall) balanciert. Der zweite Beitrag ist eine Methode zur Klassifizierung der semantischen Typen von Nomen, die sich auf gebräuchliche Nomen von langen Nominalphrasen richtet und auf einer selbstentwickelten Sammlung von semantischen Typen beruht, die die Verwendung der Nomen erfasst. Neben biomedizinischen können diese Typen auch nicht-biomedizinische und allgemeine, informationsarme Verwendungen behandeln. Der dritte Beitrag ist eine schnelle Heuristikmethode zur Disambiguierung von Entitäten in MEDLINE Kurzfassungen, welche den Durchsatz maximiert, aber auch die Genauigkeit erhält. Der vierte Beitrag ist eine korpusgetriebene Methode zur Disambiguierung von Entitäten, die speziell fehlende Entitäten in einer Wissensbank behandelt. Die Methode wandelt erst die Entitäten, die in einem Textkorpus ausgedrückt aber nicht notwendigerweise in einer Wissensbank sind, in latente Darstellungen um und führt anschließend die Disambiguierung durch

User interfaces supporting casual data-centric interactions on the Web

Thesis (Ph. D.)--Massachusetts Institute of Technology, Dept. of Electrical Engineering and Computer Science, 2007.Includes bibliographical references (p. 131-134).Today's Web is full of structured data, but much of it is transmitted in natural language text or binary images that are not conducive to further machine processing by the time it reaches the user's web browser. Consequently, casual users-those without programming skills-are limited to whatever features that web sites offer. Encountering a few dozens of addresses of public schools listed in a table on one web site and a few dozens of private schools on another web site, a casual user would have to painstakingly copy and paste each and every address into an online map service, copy and paste the schools' names, to get a unified view of where the schools are relative to her home. Any more sophisticated operations on data encountered on the Web-such as re-plotting the results of a scientific experiment found online just because the user wants to test a different theory-would be tremendously difficult. Conversely, to publish structured data to the Web, a casual user settles for static data files or HTML pages that offer none of the features provided by commercial sites such as searching, filtering, maps, timelines, etc., or even as basic a feature as sorting. To offer a rich experience on her site, the casual user must single-handedly build a three-tier web application that normally takes a team of engineers several months. This thesis explores user interfaces for casual users-those without programming skills-to extract and reuse data from today's Web as well as publish data into the Web in richly browsable and reusable form. By assuming that casual users most often deal with small and simple data sets, declarative syntaxes and direct manipulation techniques can be supported for tasks previously done only with programming in experts' tools. User studies indicated that tools built with such declarative syntaxes and direct manipulation techniques could be used by casual users. Moreover, the data publishing tool built from this research has been used by actual users on the Web for many purposes, from presenting educational materials in classroom to listing products for very small businesses.by David F. Huynh.Ph.D

Ontology Matching: OM-2018: Proceedings of the ISWC Workshop

International audienceno abstrac

Contributions to Lifelogging Protection In Streaming Environments

Tots els dies, més de cinc mil milions de persones generen algun tipus de dada a través d'Internet. Per accedir a aquesta informació, necessitem utilitzar serveis de recerca, ja siguin motors de cerca web o assistents personals. A cada interacció amb ells, el nostre registre d'accions, logs, s'utilitza per oferir una millor experiència. Per a les empreses, també són molt valuosos, ja que ofereixen una forma de monetitzar el servei. La monetització s'aconsegueix venent dades a tercers, però, els logs de consultes podrien exposar informació confidencial de l'usuari (identificadors, malalties, tendències sexuals, creences religioses) o usar-se per al que es diu "life-logging ": Un registre continu de les activitats diàries. La normativa obliga a protegir aquesta informació. S'han proposat prèviament sistemes de protecció per a conjunts de dades tancats, la majoria d'ells treballant amb arxius atòmics o dades estructurades. Desafortunadament, aquests sistemes no s'adapten quan es fan servir en el creixent entorn de dades no estructurades en temps real que representen els serveis d'Internet. Aquesta tesi té com objectiu dissenyar tècniques per protegir la informació confidencial de l'usuari en un entorn no estructurat d’streaming en temps real, garantint un equilibri entre la utilitat i la protecció de dades. S'han fet tres propostes per a una protecció eficaç dels logs. La primera és un nou mètode per anonimitzar logs de consultes, basat en k-anonimat probabilística i algunes eines de desanonimització per determinar fuites de dades. El segon mètode, s'ha millorat afegint un equilibri configurable entre privacitat i usabilitat, aconseguint una gran millora en termes d'utilitat de dades. La contribució final es refereix als assistents personals basats en Internet. La informació generada per aquests dispositius es pot considerar "life-logging" i pot augmentar els riscos de privacitat de l'usuari. Es proposa un esquema de protecció que combina anonimat de logs i signatures sanitizables.Todos los días, más de cinco mil millones de personas generan algún tipo de dato a través de Internet. Para acceder a esa información, necesitamos servicios de búsqueda, ya sean motores de búsqueda web o asistentes personales. En cada interacción con ellos, nuestro registro de acciones, logs, se utiliza para ofrecer una experiencia más útil. Para las empresas, también son muy valiosos, ya que ofrecen una forma de monetizar el servicio, vendiendo datos a terceros. Sin embargo, los logs podrían exponer información confidencial del usuario (identificadores, enfermedades, tendencias sexuales, creencias religiosas) o usarse para lo que se llama "life-logging": Un registro continuo de las actividades diarias. La normativa obliga a proteger esta información. Se han propuesto previamente sistemas de protección para conjuntos de datos cerrados, la mayoría de ellos trabajando con archivos atómicos o datos estructurados. Desafortunadamente, esos sistemas no se adaptan cuando se usan en el entorno de datos no estructurados en tiempo real que representan los servicios de Internet. Esta tesis tiene como objetivo diseñar técnicas para proteger la información confidencial del usuario en un entorno no estructurado de streaming en tiempo real, garantizando un equilibrio entre utilidad y protección de datos. Se han hecho tres propuestas para una protección eficaz de los logs. La primera es un nuevo método para anonimizar logs de consultas, basado en k-anonimato probabilístico y algunas herramientas de desanonimización para determinar fugas de datos. El segundo método, se ha mejorado añadiendo un equilibrio configurable entre privacidad y usabilidad, logrando una gran mejora en términos de utilidad de datos. La contribución final se refiere a los asistentes personales basados en Internet. La información generada por estos dispositivos se puede considerar “life-logging” y puede aumentar los riesgos de privacidad del usuario. Se propone un esquema de protección que combina anonimato de logs y firmas sanitizables.Every day, more than five billion people generate some kind of data over the Internet. As a tool for accessing that information, we need to use search services, either in the form of Web Search Engines or through Personal Assistants. On each interaction with them, our record of actions via logs, is used to offer a more useful experience. For companies, logs are also very valuable since they offer a way to monetize the service. Monetization is achieved by selling data to third parties, however query logs could potentially expose sensitive user information: identifiers, sensitive data from users (such as diseases, sexual tendencies, religious beliefs) or be used for what is called ”life-logging”: a continuous record of one’s daily activities. Current regulations oblige companies to protect this personal information. Protection systems for closed data sets have previously been proposed, most of them working with atomic files or structured data. Unfortunately, those systems do not fit when used in the growing real-time unstructured data environment posed by Internet services. This thesis aims to design techniques to protect the user’s sensitive information in a non-structured real-time streaming environment, guaranteeing a trade-off between data utility and protection. In this regard, three proposals have been made in efficient log protection. The first is a new method to anonymize query logs, based on probabilistic k-anonymity and some de-anonymization tools to determine possible data leaks. A second method has been improved in terms of a configurable trade-off between privacy and usability, achieving a great improvement in terms of data utility. Our final contribution concerns Internet-based Personal Assistants. The information generated by these devices is likely to be considered life-logging, and it can increase the user’s privacy risks. The proposal is a protection scheme that combines log anonymization and sanitizable signatures