A leed analysis of the (2×1)H-Ni(110) structure

A monolayer of H atoms adsorbed on Ni(110) below 180 K forms a (2×1) structure. The unit cell exhibits a glide symmetry plane and contains two adsorbed atoms. Based on a quantitative comparison between experimental and calculated LEED I/V spectra using standard R-factors the following structure was derived: On the clean Ni(110) surface the separation between the first two atomic layers, d12, is contracted by 8.5%±1.5% with respect to the bulk value; those between the second and third and the third and fourth layer, d23 and d34, are expanded by 3.5%±1.5% and 1%±1.5%, respectively—in agreement with recent other results. In the presence of the H adlayer the contraction of d12 is reduced to 4.5%±1.5%, while the expansion of d23 is not affected within the limits of accuracy. The third interlayer spacing d34 returns to its bulk value. The H atoms occupy threefold-coordinated sites formed by two Ni atoms from the first layer and one Ni atom from the second layer which confirms previous more qualitative conclusions based on He diffraction and vibrational spectroscopy. The bond lengths between H and its neighbouring Ni atoms were determined to be equal, namely 1.72±0.1 Å

Streetscapes: behind the scenes

Planning processes are often disconnected from the experienced place on the ground. Ideologies of space, developing agendas, time constraints and budgets serve to limit the understanding of the lived world of those dwelling in an area and stand at risk to reduce it to the abstract space of maps. This induces territorial control from above and an ignorance of the soft, social values of the individual. Urbanization and globalization are reshaping our world and demands knowledge, understanding and change. It generates changes in the urban fabric with growing class differences and an increasing physical and social fragmentation. The majority of this change is taking place in the global South, putting an immense pressure on the informal settlements in the cities. Future urban planners have a big task in turning this into a sustainable and equal process. However, planners keep imposing planning ideals from above, shaped by western ideologies of space that are disregarding slums as becoming one of the major human habitats. The relation between the life world on the ground and the system world of the planner remain distant. How can planners and landscape architects understand and manage their role in these processes better? This thesis set out to explore that relationship. The first phase of that task was undertaken through a field study in Nairobi, Kenya. Today, Nairobi host more than 200 informal settlements that are the home to more than half of the cities population. The authors of the thesis got the opportunity to make a report for UN-Habitat, who has recently introduced a new approach to slum upgrading that is emphasizing the role of streets as an entry point. Focus in the report was the Korogocho Street Upgrading Programme that involved the upgrading of the major streets in Korogocho Slum in Nairobi. The Street Upgrading Project was studied from multiple levels though the interaction with residents in Korogocho, policy makers, politicians and project planners. The streets were considered to be a field where multiple strategies and tactics of the actors were played out, shaping the experience of it and its future development. It demonstrated many dimensions and symbolic meanings, highlighting several conflicts between the system world and the life world. Consequently, the thesis is a reflection upon the authors’ own working process in Nairobi, and how they were affected by the system world of international organizations such as UN-Habitat, policy making processes, the life world of the resident of Korogocho and their own world as landscape architecture students. Theory, narratives and reflections comment on the content of the published UN-report that was finalized in Nairobi, issues and phenomena encountered in Korgocho, at the UN-Headquarters and through interviews with local government agents. Furthermore, the methods and tools used in the making of the report are commented, elaborated and evaluated. This serves as an elaboration on the complex relationship between ideologies of space, the multiple realities on the ground, and how this complicated issue can be approached as a practicing landscape architect or planner. 0

Coverage dependence of adsorption-site geometry in the Cs/Ru(0001) system: A low-energy electron-diffraction analysis

The ordered overlayer structures formed by Cs adsorbed on a Ru(0001) surface were analyzed by use of low-energy electron diffraction (LEED). The phase diagram reflects the dominance of dipole-dipole repulsions between the adparticles and comprises quasiliquid configurations characterized by diffraction rings up to a coverage Θ=0.17, followed by a (2×2) structure with maximum intensity of the diffraction spots at Θ=0.23. Beyond Θ=0.25, a series of structures with rotated unit cells is identified which are followed by a (√3 × √3 )R30° structure around Θ=0.33 (≊completion of the first monolayer). In the (2×2) phase the Cs atoms are located in on-top sites with a Ru-Cs bond length of 3.25±0.08 Å, corresponding to a hard-sphere radius of 1.9 Å for the Cs atom. In the (√3 × √3 )R30° structure, on the other hand, the adatoms occupy threefold hollow hcp sites with Ru-Cs bond lengths of 3.52±0.02 Å, corresponding to a Cs hard-sphere radius of about 2.2 Å. The increase in bond length and effective radius of the adparticle is paralleled by the transition of the character of bonding from more ‘‘ionic’’ at Θ=0.25 (large dipole moment) to more ‘‘metallic’’ at Θ=0.33 (dipole moment reduced by about 30%). The associated change of the type of adsorption site (from on-top to hollow) is qualitatively rationalized by a model according to which inherently less favorable sites may become preferred due to improved effective screening of the dipole-dipole repulsion by the location of substrate atoms in the region between neighboring adatoms

Fructan and hormone connections

Plants rely on “reserve” (stored) carbon (C) for growth and survival when newly synthesized C becomes limited. Besides a classic yet recalcitrant C reserve starch, fructans, a class of sucrose-derived soluble fructosyl-oligosaccharides, represent a major store of C in many temperate plant species including the economically important Asteraceae and Poaceae families (Hendry, 1993). Dicots typically accumulate inulin-type fructans as long-term storage (underground organs) whilst grasses and cereals accumulate fructans as short-term reserves in above-ground parts (Pollock and Cairns, 1991; Van Laere and Van den Ende, 2002). Unlike chloroplast-based water-insoluble starch, fructans are semi-soluble, possess flexible structures (Phelps, 1965; Valluru and Van den Ende, 2008), can be synthesized at low temperatures (Pollock and Cairns, 1991), and are degraded by a single type of fructan hydrolases, fructan exohydrolases (FEHs). Unlike starch that store in plastids, fructans store in vacuoles, which is physically less stressful to the active constituents of, and allows more C synthesis by, the photosynthetic cell, which may be different in dicots where fructans do not typically accumulate in green parts

Protein Phosphatase 2A Controls Ethylene Biosynthesis by Differentially Regulating the Turnover of ACC Synthase Isoforms

The gaseous hormone ethylene is one of the master regulators of development and physiology throughout the plant life cycle. Ethylene biosynthesis is stringently regulated to permit maintenance of low levels during most phases of vegetative growth but to allow for rapid peaks of high production at developmental transitions and under stress conditions. In most tissues ethylene is a negative regulator of cell expansion, thus low basal levels of ethylene biosynthesis in dark-grown seedlings are critical for optimal cell expansion during early seedling development. The committed steps in ethylene biosynthesis are performed by the enzymes 1-aminocyclopropane 1-carboxylate synthase (ACS) and 1-aminocyclopropane 1-carboxylate oxidase (ACO). The abundance of different ACS enzymes is tightly regulated both by transcriptional control and by post-translational modifications and proteasome-mediated degradation. Here we show that specific ACS isozymes are targets for regulation by protein phosphatase 2A (PP2A) during Arabidopsis thaliana seedling growth and that reduced PP2A function causes increased ACS activity in the roots curl in 1-N-naphthylphthalamic acid 1 (rcn1) mutant. Genetic analysis reveals that ethylene overproduction in PP2A-deficient plants requires ACS2 and ACS6, genes that encode ACS proteins known to be stabilized by phosphorylation, and proteolytic turnover of the ACS6 protein is retarded when PP2A activity is reduced. We find that PP2A and ACS6 proteins associate in seedlings and that RCN1-containing PP2A complexes specifically dephosphorylate a C-terminal ACS6 phosphopeptide. These results suggest that PP2A-dependent destabilization requires RCN1-dependent dephosphorylation of the ACS6 C-terminus. Surprisingly, rcn1 plants exhibit decreased accumulation of the ACS5 protein, suggesting that a regulatory phosphorylation event leads to ACS5 destabilization. Our data provide new insight into the circuitry that ensures dynamic control of ethylene synthesis during plant development, showing that PP2A mediates a finely tuned regulation of overall ethylene production by differentially affecting the stability of specific classes of ACS enzymes

Transcriptomic Events Involved in Melon Mature-Fruit Abscission Comprise the Sequential Induction of Cell-Wall Degrading Genes Coupled to a Stimulation of Endo and Exocytosis

Background: Mature-fruit abscission (MFA) in fleshy-fruit is a genetically controlled process with mechanisms that, contrary to immature-fruit abscission, has not been fully characterized. Here, we use pyrosequencing to characterize the transcriptomes of melon abscission zone (AZ) at three stages during AZ-cell separation in order to understand MFA control at an early stage of AZ-activation. Principal Findings: The results show that by early induction of MFA, the melon AZ exhibits major gene induction, while by late induction of MFA, melon AZ shows major gene repression. Although some genes displayed similar regulation in both early and late induction of abscission, such as EXT1-EXT4, EGase1, IAA2, ERF1, AP2D15, FLC, MADS2, ERAF17, SAP5 and SCL13 genes, the majority had different expression patterns. This implies that time-specific events occur during MFA, and emphasizes the value of characterizing multiple time-specific abscission transcriptomes. Analysis of gene-expression from these AZs reveal that a sequential induction of cell-wall-degrading genes is associated with the upregulation of genes involved in endo and exocytosis, and a shift in plant-hormone metabolism and signaling genes during MFA. This is accompanied by transcriptional activity of small-GTPases and synthaxins together with tubulins, dynamins, V-type ATPases and kinesin-like proteins potentially involved in MFA signaling. Early events are potentially controlled by down-regulation of MADS-box, AP2/ERF and Aux/IAA transcription-factors, and up-regulation of homeobox, zinc finger, bZIP, and WRKY transcription-factors, while late events may be controlled by up-regulation of MYB transcription-factors. Significance: Overall, the data provide a comprehensive view on MFA in fleshy-fruit, identifying candidate genes and pathways associated with early induction of MFA. Our comprehensive gene-expression profile will be very useful for elucidating gene regulatory networks of the MFA in fleshy-fruit

Dual-Level Regulation of ACC Synthase Activity by MPK3/MPK6 Cascade and Its Downstream WRKY Transcription Factor during Ethylene Induction in Arabidopsis

Plants under pathogen attack produce high levels of ethylene, which plays important roles in plant immunity. Previously, we reported the involvement of ACS2 and ACS6, two Type I ACS isoforms, in Botrytis cinerea–induced ethylene biosynthesis and their regulation at the protein stability level by MPK3 and MPK6, two Arabidopsis pathogen-responsive mitogen-activated protein kinases (MAPKs). The residual ethylene induction in the acs2/acs6 double mutant suggests the involvement of additional ACS isoforms. It is also known that a subset of ACS genes, including ACS6, is transcriptionally induced in plants under stress or pathogen attack. However, the importance of ACS gene activation and the regulatory mechanism(s) are not clear. In this report, we demonstrate using genetic analysis that ACS7 and ACS11, two Type III ACS isoforms, and ACS8, a Type II ACS isoform, also contribute to the B. cinerea–induced ethylene production. In addition to post-translational regulation, transcriptional activation of the ACS genes also plays a critical role in sustaining high levels of ethylene induction. Interestingly, MPK3 and MPK6 not only control the stability of ACS2 and ACS6 proteins via direct protein phosphorylation but also regulate the expression of ACS2 and ACS6 genes. WRKY33, another MPK3/MPK6 substrate, is involved in the MPK3/MPK6-induced ACS2/ACS6 gene expression based on genetic analyses. Furthermore, chromatin-immunoprecipitation assay reveals the direct binding of WRKY33 to the W-boxes in the promoters of ACS2 and ACS6 genes in vivo, suggesting that WRKY33 is directly involved in the activation of ACS2 and ACS6 expression downstream of MPK3/MPK6 cascade in response to pathogen invasion. Regulation of ACS activity by MPK3/MPK6 at both transcriptional and protein stability levels plays a key role in determining the kinetics and magnitude of ethylene induction