The Fourier Imaging X-ray Spectrometer (FIXS) for the Argentinian, Scout-launched satelite de Aplicaciones Cienficas-1 (SAC-1)

The Fourier Imaging X-ray Spectrometer (FIXS) is one of four instruments on SAC-1, the Argentinian satellite being proposed for launch by NASA on a Scout rocket in 1992/3. The FIXS is designed to provide solar flare images at X-ray energies between 5 and 35 keV. Observations will be made on arcsecond size scales and subsecond time scales of the processes that modify the electron spectrum and the thermal distribution in flaring magnetic structures

Correcting for optimistic prediction in small data sets.

The C statistic is a commonly reported measure of screening test performance. Optimistic estimation of the C statistic is a frequent problem because of overfitting of statistical models in small data sets, and methods exist to correct for this issue. However, many studies do not use such methods, and those that do correct for optimism use diverse methods, some of which are known to be biased. We used clinical data sets (United Kingdom Down syndrome screening data from Glasgow (1991-2003), Edinburgh (1999-2003), and Cambridge (1990-2006), as well as Scottish national pregnancy discharge data (2004-2007)) to evaluate different approaches to adjustment for optimism. We found that sample splitting, cross-validation without replication, and leave-1-out cross-validation produced optimism-adjusted estimates of the C statistic that were biased and/or associated with greater absolute error than other available methods. Cross-validation with replication, bootstrapping, and a new method (leave-pair-out cross-validation) all generated unbiased optimism-adjusted estimates of the C statistic and had similar absolute errors in the clinical data set. Larger simulation studies confirmed that all 3 methods performed similarly with 10 or more events per variable, or when the C statistic was 0.9 or greater. However, with lower events per variable or lower C statistics, bootstrapping tended to be optimistic but with lower absolute and mean squared errors than both methods of cross-validation

Long-Term Denervated Rat Schwann Cells Retain Their Capacity to Proliferate and to Myelinate Axons in vitro

Functional recovery is poor after peripheral nerve injury and delayed surgical repair or when nerves must regenerate over long distances to reinnervate distant targets. A reduced capacity of Schwann cells (SCs) in chronically denervated distal nerve stumps to support and interact with regenerating axons may account for the poor outcome. In an in vitro system, we examined the capacity of adult, long-term denervated rat SCs to proliferate and to myelinate neurites in co-cultures with fetal dorsal root ganglion (DRG) neurons. Non-neuronal cells were counted immediately after their isolation from the distal sciatic nerve stumps that were subjected to acute denervation of 7 days or chronic denervation of either 7 weeks or 17 months. Thereafter, equal numbers of the non-neural cells were co-cultured with purified dissociated DRG neurons for 5 days. The co-cultures were then treated with 3H-Thymidine for 24 h to quantitate SC proliferation with S100 immunostaining and autoradiography. After a 24-day period of co-culture, Sudan Black staining was used to visualize and count myelin segments that were elaborated around DRG neurites by the SCs. Isolated non-neural cells from 7-week chronically denervated nerve stumps increased 2.5-fold in number compared to ~2 million in 7 day acutely denervated stumps. There were only <0.2 million cells in the 17-week chronically denervated stumps. Nonetheless, these chronically denervated SCs maintained their proliferative capacity although the capacity was reduced to 30% in the 17-month chronically denervated distal nerve stumps. Moreover, the chronically denervated SCs retained their capacity to myelinate DRG neurites: there was extensive myelination of the neurites by the acutely and chronically denervated SCs after 24 days co-culture. There were no significant differences in the extent of myelination. We conclude that the low numbers of surviving SCs in chronically denervated distal nerve stumps retain their ability to respond to axonal signals to divide and to elaborate myelin. However, their low numbers consequent to their poor survival and their reduced capacity to proliferate account, at least in part, for the poor functional recovery after delayed surgical repair of injured nerve and/or the repair of injured nerves far from their target organs

Constructed Wetlands for Agricultural Wastewater Treatment in Northeastern North America:A Review

Constructed wetlands (CW) are a treatment option for agricultural wastewater. Their ability to adequately function in cold climates continues to be evaluated as they are biologically active systems that depend on microbial and plant activity. In order to assess their performance and to highlight regional specific design considerations, a review of CWs in Eastern Canada and the Northeastern USA was conducted. Here, we synthesize performance data from 21 studies, in which 25 full-scale wetlands were assessed. Where possible, data were separated seasonally to evaluate the climatic effects on treatment performance. The wastewater parameters considered were five-day biochemical oxygen demand (BOD5), total suspended solids (TSS), E. coli, fecal coliforms, total Kjeldahl nitrogen (TKN), ammonia/ammonium (NH3/NH4+-N), nitrate-nitrogen (NO3−-N), and total phosphorus (TP). Average concentration reductions were: BOD5 81%, TSS 83%, TKN 75%, NH4+-N 76%, NO3−-N 42%, and TP 64%. Average log reductions for E. coli and fecal coliforms were 1.63 and 1.93, respectively. Average first order areal rate constants (ka, m·y−1) were: BOD5 6.0 m·y−1, TSS 7.7 m·y−1, E. coli 7.0 m·y−1, fecal coliforms 9.7 m·y−1, TKN 3.1 m·y−1, NH4+-N 3.3 m·y−1, NO3−-N 2.5 m·y−1, and TP 2.9 m·y−1. In general, CWs effectively treated a variety of agricultural wastewaters, regardless of season

Gender violence in schools: taking the ‘girls-as-victims’ discourse forward

This paper draws attention to the gendered nature of violence in schools. Recent recognition that schools can be violent places has tended to ignore the fact that many such acts originate in unequal and antagonistic gender relations, which are tolerated and ‘normalised’ by everyday school structures and processes. After examining some key concepts and definitions, we provide a brief overview of the scope and various manifestations of gender violence in schools, noting that most research to date has focused on girls as victims of gender violence within a heterosexual context and ignores other forms such as homophobic and girl violence. We then move on to look at a few interventions designed to address gender violence in schools in the developing world and end by highlighting the need for more research and improved understanding of the problem and how it can be addressed

Microevolution during the emergence of a monophasic Salmonella Typhimurium epidemic in the United Kingdom

Microevolutionary events associated with the emergence and clonal expansion of new 27 epidemic clones of bacterial pathogens hold the key to understanding the drivers of 28 epidemiological success. We describe a comparative whole genome sequence and 29 phylogenomic analysis of monophasic Salmonella Typhimurium isolates from the UK 30 and Italy from 2005-2012. Monophasic isolates from this time formed a single clade 31 distinct from recent monophasic epidemic clones described previously from North 32 America and Spain. The current UK monophasic epidemic clones encode a novel 33 genomic island encoding resistance to heavy metals (SGI-3), and composite transposon 34 encoding antibiotic resistance genes not present in other Typhimurium isolates, that 35 may have contributed to the epidemiological success. We also report a remarkable 36 degree of genotypic variation that accumulated during clonal expansion of a UK 37 epidemic including multiple independent acquisitions of a novel prophage carrying the 38 sopE gene and multiple deletion events affecting the phase II flagellin locus

Genomic Characterization of Patient-Derived Xenograft Models Established from Fine Needle Aspirate Biopsies of a Primary Pancreatic Ductal Adenocarcinoma and from Patient-Matched Metastatic Sites

N-of-1 trials target actionable mutations, yet such approaches do not test genomically-informed therapies in patient tumor models prior to patient treatment. To address this, we developed patient-derived xenograft (PDX) models from fine needle aspiration (FNA) biopsies (FNA-PDX) obtained from primary pancreatic ductal adenocarcinoma (PDAC) at the time of diagnosis. Here, we characterize PDX models established from one primary and two metastatic sites of one patient. We identified an activating KRAS G12R mutation among other mutations in these models. In explant cells derived from these PDX tumor models with a KRAS G12R mutation, treatment with inhibitors of CDKs (including CDK9) reduced phosphorylation of a marker of CDK9 activity (phospho-RNAPII CTD Ser2/5) and reduced viability/growth of explant cells derived from PDAC PDX models. Similarly, a CDK inhibitor reduced phospho-RNAPII CTD Ser2/5, increased apoptosis, and inhibited tumor growth in FNA-PDX and patient-matched metastatic-PDX models. In summary, PDX models can be constructed from FNA biopsies of PDAC which in turn can enable genomic characterization and identification of potential therapies

The circumstellar disc in the Bok globule CB 26: Multi-wavelength observations and modelling of the dust disc and envelope

Circumstellar discs are expected to be the nursery of planets. Grain growth within such discs is the first step in the planet formation process. The Bok globule CB 26 harbours such a young disc. We present a detailed model of the edge-on circumstellar disc and its envelope in the Bok globule CB 26. The model is based on HST near-infrared maps in the I, J, H, and K bands, OVRO and SMA radio maps at 1.1mm, 1.3mm and 2.7mm, and the spectral energy distribution (SED) from 0.9 microns to 3mm. New photometric and spectroscopic data from the Spitzer Space Telescope and the Caltech Submilimeter Observatory have been obtained and are part of our analysis. Using the self-consistent radiative transfer code MC3D, the model we construct is able to discriminate parameter sets and dust properties of both its parts, namely envelope and disc. We find that the disc has an inner hole with a radius of 45 +/- 5 AU. Based on a dust model including silicate and graphite the maximum grain size needed to reproduce the spectral millimetre index is 2.5 microns. Features seen in the near-infrared images, dominated by scattered light, can be described as a result of a rotating envelope. Successful employment of ISM dust in both the disc and envelope hint that grain growth may not yet play a significant role for the appearance of this system. A larger inner hole gives rise to the assumption that CB 26 is a circumbinary disc.Comment: 18 pages, 15 figures, Accepted for publication in A&

Three-micron spectra of AGB stars and supergiants in nearby galaxies

The dependence of stellar molecular bands on the metallicity is studied using infrared L-band spectra of AGB stars (both carbon-rich and oxygen-rich) and M-type supergiants in the Large and Small Magellanic Clouds (LMC and SMC) and in the Sagittarius Dwarf Spheroidal Galaxy. The spectra cover SiO bands for oxygen-rich stars, and acetylene (C2H2), CH and HCN bands for carbon-rich AGB stars. The equivalent width of acetylene is found to be high even at low metallicity. The high C2H2 abundance can be explained with a high carbon-to-oxygen (C/O) ratio for lower metallicity carbon stars. In contrast, the HCN equivalent width is low: fewer than half of the extra-galactic carbon stars show the 3.5micron HCN band, and only a few LMC stars show high HCN equivalent width. HCN abundances are limited by both nitrogen and carbon elemental abundances. The amount of synthesized nitrogen depends on the initial mass, and stars with high luminosity (i.e. high initial mass) could have a high HCN abundance. CH bands are found in both the extra-galactic and Galactic carbon stars. None of the oxygen-rich LMC stars show SiO bands, except one possible detection in a low quality spectrum. The limits on the equivalent widths of the SiO bands are below the expectation of up to 30angstrom for LMC metallicity. Several possible explanations are discussed. The observations imply that LMC and SMC carbon stars could reach mass-loss rates as high as their Galactic counterparts, because there are more carbon atoms available and more carbonaceous dust can be formed. On the other hand, the lack of SiO suggests less dust and lower mass-loss rates in low-metallicity oxygen-rich stars. The effect on the ISM dust enrichment is discussed.Comment: accepted for A&

Exact Results for Hamiltonian Walks from the Solution of the Fully Packed Loop Model on the Honeycomb Lattice

We derive the nested Bethe Ansatz solution of the fully packed O($n$) loop model on the honeycomb lattice. From this solution we derive the bulk free energy per site along with the central charge and geometric scaling dimensions describing the critical behaviour. In the $n=0$ limit we obtain the exact compact exponents $\gamma=1$ and $\nu=1/2$ for Hamiltonian walks, along with the exact value $\kappa^2 = 3 \sqrt 3 /4$ for the connective constant (entropy). Although having sets of scaling dimensions in common, our results indicate that Hamiltonian walks on the honeycomb and Manhattan lattices lie in different universality classes.Comment: 12 pages, RevTeX, 3 figures supplied on request, ANU preprint MRR-050-9